Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
BEST1O76090 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
BEST1O76090 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
BEST1O76090 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
BEST1O76090 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
BEST1O76090 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
BEST1O76090 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
BEST1O76090 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.68■■□□□ 1.86
BEST1O76090 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
BEST1O76090 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.68■■□□□ 1.86
BEST1O76090 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
BEST1O76090 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
BEST1O76090 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
BEST1O76090 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
BEST1O76090 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.66■■□□□ 1.86
BEST1O76090 AC148477.6-201ENST00000623746 465 ntBASIC26.66■■□□□ 1.86
BEST1O76090 MIR219A2-201ENST00000608502 1504 ntBASIC26.65■■□□□ 1.86
BEST1O76090 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
BEST1O76090 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.65■■□□□ 1.86
BEST1O76090 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.65■■□□□ 1.86
BEST1O76090 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.65■■□□□ 1.86
BEST1O76090 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
BEST1O76090 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
BEST1O76090 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
BEST1O76090 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
BEST1O76090 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.63■■□□□ 1.85
BEST1O76090 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
BEST1O76090 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.63■■□□□ 1.85
BEST1O76090 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
BEST1O76090 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
BEST1O76090 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
BEST1O76090 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
BEST1O76090 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
BEST1O76090 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.62■■□□□ 1.85
BEST1O76090 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
BEST1O76090 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.62■■□□□ 1.85
BEST1O76090 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
BEST1O76090 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
BEST1O76090 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
BEST1O76090 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
BEST1O76090 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
BEST1O76090 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.59■■□□□ 1.85
BEST1O76090 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
BEST1O76090 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.58■■□□□ 1.85
BEST1O76090 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
BEST1O76090 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
BEST1O76090 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.58■■□□□ 1.85
BEST1O76090 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.58■■□□□ 1.85
BEST1O76090 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
BEST1O76090 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
BEST1O76090 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
BEST1O76090 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
BEST1O76090 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
BEST1O76090 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
BEST1O76090 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
BEST1O76090 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.56■■□□□ 1.84
BEST1O76090 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
BEST1O76090 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
BEST1O76090 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
BEST1O76090 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
BEST1O76090 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
BEST1O76090 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
BEST1O76090 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
BEST1O76090 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.55■■□□□ 1.84
BEST1O76090 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
BEST1O76090 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.54■■□□□ 1.84
BEST1O76090 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
BEST1O76090 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
BEST1O76090 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
BEST1O76090 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
BEST1O76090 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
BEST1O76090 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
BEST1O76090 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.52■■□□□ 1.84
BEST1O76090 AC018358.1-201ENST00000631079 1402 ntBASIC26.52■■□□□ 1.84
BEST1O76090 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
BEST1O76090 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.51■■□□□ 1.83
BEST1O76090 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
BEST1O76090 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.51■■□□□ 1.83
BEST1O76090 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.51■■□□□ 1.83
BEST1O76090 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
BEST1O76090 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
BEST1O76090 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
BEST1O76090 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
BEST1O76090 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
BEST1O76090 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
BEST1O76090 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.49■■□□□ 1.83
BEST1O76090 HSD17B1P1-201ENST00000590052 955 ntBASIC26.49■■□□□ 1.83
BEST1O76090 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.49■■□□□ 1.83
BEST1O76090 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
BEST1O76090 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
BEST1O76090 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.49■■□□□ 1.83
BEST1O76090 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.49■■□□□ 1.83
BEST1O76090 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
BEST1O76090 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
BEST1O76090 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
BEST1O76090 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
BEST1O76090 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
BEST1O76090 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
BEST1O76090 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
BEST1O76090 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms