Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NDUFA4O00483 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NDUFA4O00483 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
NDUFA4O00483 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.33■□□□□ 0.68
NDUFA4O00483 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NDUFA4O00483 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.33■□□□□ 0.68
NDUFA4O00483 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NDUFA4O00483 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NDUFA4O00483 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
NDUFA4O00483 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NDUFA4O00483 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFA4O00483 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFA4O00483 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFA4O00483 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFA4O00483 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFA4O00483 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFA4O00483 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDUFA4O00483 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.31■□□□□ 0.68
NDUFA4O00483 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.31■□□□□ 0.68
NDUFA4O00483 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDUFA4O00483 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDUFA4O00483 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.31■□□□□ 0.68
NDUFA4O00483 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NDUFA4O00483 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDUFA4O00483 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NDUFA4O00483 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDUFA4O00483 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NDUFA4O00483 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.29■□□□□ 0.68
NDUFA4O00483 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.29■□□□□ 0.68
NDUFA4O00483 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDUFA4O00483 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDUFA4O00483 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NDUFA4O00483 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NDUFA4O00483 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDUFA4O00483 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.28■□□□□ 0.68
NDUFA4O00483 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.28■□□□□ 0.68
NDUFA4O00483 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NDUFA4O00483 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NDUFA4O00483 AC008813.1-201ENST00000536597 885 ntBASIC19.27■□□□□ 0.68
NDUFA4O00483 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NDUFA4O00483 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.26■□□□□ 0.67
NDUFA4O00483 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NDUFA4O00483 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
NDUFA4O00483 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFA4O00483 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NDUFA4O00483 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NDUFA4O00483 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFA4O00483 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFA4O00483 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFA4O00483 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.25■□□□□ 0.67
NDUFA4O00483 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NDUFA4O00483 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.24■□□□□ 0.67
NDUFA4O00483 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFA4O00483 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFA4O00483 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFA4O00483 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NDUFA4O00483 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NDUFA4O00483 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFA4O00483 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFA4O00483 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFA4O00483 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFA4O00483 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFA4O00483 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFA4O00483 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NDUFA4O00483 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDUFA4O00483 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.23■□□□□ 0.67
NDUFA4O00483 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDUFA4O00483 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NDUFA4O00483 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NDUFA4O00483 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDUFA4O00483 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDUFA4O00483 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
NDUFA4O00483 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDUFA4O00483 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFA4O00483 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFA4O00483 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFA4O00483 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFA4O00483 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFA4O00483 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
NDUFA4O00483 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.2■□□□□ 0.66
NDUFA4O00483 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.2■□□□□ 0.66
NDUFA4O00483 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFA4O00483 CR559946.2-201ENST00000623684 991 ntBASIC19.2■□□□□ 0.66
NDUFA4O00483 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.2■□□□□ 0.66
NDUFA4O00483 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.19■□□□□ 0.66
NDUFA4O00483 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFA4O00483 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFA4O00483 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NDUFA4O00483 MIR7108-201ENST00000614319 87 ntBASIC19.19■□□□□ 0.66
NDUFA4O00483 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFA4O00483 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NDUFA4O00483 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFA4O00483 MIR3648-2-201ENST00000581792 180 ntBASIC19.18■□□□□ 0.66
NDUFA4O00483 MIR3648-1-201ENST00000615959 180 ntBASIC19.18■□□□□ 0.66
NDUFA4O00483 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.18■□□□□ 0.66
NDUFA4O00483 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFA4O00483 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NDUFA4O00483 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFA4O00483 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NDUFA4O00483 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms