Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHKB-CPT1BH3BT56 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHKB-CPT1BH3BT56 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHKB-CPT1BH3BT56 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHKB-CPT1BH3BT56 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHKB-CPT1BH3BT56 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHKB-CPT1BH3BT56 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
CHKB-CPT1BH3BT56 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHKB-CPT1BH3BT56 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHKB-CPT1BH3BT56 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHKB-CPT1BH3BT56 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.25□□□□□ -0.13
CHKB-CPT1BH3BT56 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHKB-CPT1BH3BT56 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHKB-CPT1BH3BT56 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHKB-CPT1BH3BT56 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHKB-CPT1BH3BT56 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHKB-CPT1BH3BT56 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CHKB-CPT1BH3BT56 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC14.25□□□□□ -0.13
CHKB-CPT1BH3BT56 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHKB-CPT1BH3BT56 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHKB-CPT1BH3BT56 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CHKB-CPT1BH3BT56 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CHKB-CPT1BH3BT56 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHKB-CPT1BH3BT56 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CHKB-CPT1BH3BT56 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHKB-CPT1BH3BT56 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHKB-CPT1BH3BT56 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHKB-CPT1BH3BT56 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CHKB-CPT1BH3BT56 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHKB-CPT1BH3BT56 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CHKB-CPT1BH3BT56 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHKB-CPT1BH3BT56 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CHKB-CPT1BH3BT56 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC14.22□□□□□ -0.13
CHKB-CPT1BH3BT56 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHKB-CPT1BH3BT56 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHKB-CPT1BH3BT56 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHKB-CPT1BH3BT56 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHKB-CPT1BH3BT56 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHKB-CPT1BH3BT56 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHKB-CPT1BH3BT56 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC14.21□□□□□ -0.13
CHKB-CPT1BH3BT56 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHKB-CPT1BH3BT56 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHKB-CPT1BH3BT56 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
CHKB-CPT1BH3BT56 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CHKB-CPT1BH3BT56 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHKB-CPT1BH3BT56 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHKB-CPT1BH3BT56 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHKB-CPT1BH3BT56 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CHKB-CPT1BH3BT56 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHKB-CPT1BH3BT56 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHKB-CPT1BH3BT56 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CHKB-CPT1BH3BT56 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHKB-CPT1BH3BT56 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CHKB-CPT1BH3BT56 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHKB-CPT1BH3BT56 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHKB-CPT1BH3BT56 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CHKB-CPT1BH3BT56 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC14.19□□□□□ -0.14
CHKB-CPT1BH3BT56 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHKB-CPT1BH3BT56 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHKB-CPT1BH3BT56 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.18□□□□□ -0.14
CHKB-CPT1BH3BT56 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CHKB-CPT1BH3BT56 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC14.17□□□□□ -0.14
CHKB-CPT1BH3BT56 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHKB-CPT1BH3BT56 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC14.17□□□□□ -0.14
CHKB-CPT1BH3BT56 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.17□□□□□ -0.14
CHKB-CPT1BH3BT56 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CHKB-CPT1BH3BT56 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
CHKB-CPT1BH3BT56 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.17□□□□□ -0.14
CHKB-CPT1BH3BT56 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHKB-CPT1BH3BT56 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHKB-CPT1BH3BT56 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHKB-CPT1BH3BT56 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CHKB-CPT1BH3BT56 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHKB-CPT1BH3BT56 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC14.16□□□□□ -0.14
CHKB-CPT1BH3BT56 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHKB-CPT1BH3BT56 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHKB-CPT1BH3BT56 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHKB-CPT1BH3BT56 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHKB-CPT1BH3BT56 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHKB-CPT1BH3BT56 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHKB-CPT1BH3BT56 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHKB-CPT1BH3BT56 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHKB-CPT1BH3BT56 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHKB-CPT1BH3BT56 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHKB-CPT1BH3BT56 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHKB-CPT1BH3BT56 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHKB-CPT1BH3BT56 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.15□□□□□ -0.14
CHKB-CPT1BH3BT56 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC14.15□□□□□ -0.14
CHKB-CPT1BH3BT56 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHKB-CPT1BH3BT56 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHKB-CPT1BH3BT56 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.14□□□□□ -0.15
CHKB-CPT1BH3BT56 AC142086.6-201ENST00000621154 1765 ntBASIC14.14□□□□□ -0.15
CHKB-CPT1BH3BT56 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHKB-CPT1BH3BT56 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC14.14□□□□□ -0.15
CHKB-CPT1BH3BT56 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
CHKB-CPT1BH3BT56 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHKB-CPT1BH3BT56 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHKB-CPT1BH3BT56 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CHKB-CPT1BH3BT56 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHKB-CPT1BH3BT56 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms