Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF223E7ERA6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.97
RNF223E7ERA6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF223E7ERA6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF223E7ERA6 AC007029.1-201ENST00000604183 313 ntBASIC21.08■□□□□ 0.97
RNF223E7ERA6 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF223E7ERA6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF223E7ERA6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF223E7ERA6 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF223E7ERA6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF223E7ERA6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF223E7ERA6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RNF223E7ERA6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF223E7ERA6 AL592293.1-201ENST00000502889 1188 ntBASIC21.06■□□□□ 0.96
RNF223E7ERA6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RNF223E7ERA6 AC133552.2-201ENST00000619106 1032 ntBASIC21.06■□□□□ 0.96
RNF223E7ERA6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF223E7ERA6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF223E7ERA6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.04■□□□□ 0.96
RNF223E7ERA6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF223E7ERA6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF223E7ERA6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF223E7ERA6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RNF223E7ERA6 AC009831.1-201ENST00000580420 1582 ntBASIC21.04■□□□□ 0.96
RNF223E7ERA6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF223E7ERA6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF223E7ERA6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF223E7ERA6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF223E7ERA6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF223E7ERA6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF223E7ERA6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF223E7ERA6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF223E7ERA6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
RNF223E7ERA6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF223E7ERA6 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RNF223E7ERA6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF223E7ERA6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21■□□□□ 0.95
RNF223E7ERA6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RNF223E7ERA6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF223E7ERA6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF223E7ERA6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.99■□□□□ 0.95
RNF223E7ERA6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF223E7ERA6 SMPD5-203ENST00000639008 1464 ntBASIC20.99■□□□□ 0.95
RNF223E7ERA6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF223E7ERA6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF223E7ERA6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RNF223E7ERA6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.98■□□□□ 0.95
RNF223E7ERA6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RNF223E7ERA6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF223E7ERA6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF223E7ERA6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF223E7ERA6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.97■□□□□ 0.95
RNF223E7ERA6 AL035685.1-201ENST00000636663 812 ntBASIC20.97■□□□□ 0.95
RNF223E7ERA6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
RNF223E7ERA6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF223E7ERA6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF223E7ERA6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF223E7ERA6 AL359258.2-201ENST00000564063 1566 ntBASIC20.96■□□□□ 0.95
RNF223E7ERA6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RNF223E7ERA6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RNF223E7ERA6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
RNF223E7ERA6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF223E7ERA6 AL451085.2-201ENST00000605085 799 ntBASIC20.95■□□□□ 0.94
RNF223E7ERA6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF223E7ERA6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF223E7ERA6 BHLHE23-202ENST00000612929 1109 ntBASIC20.94■□□□□ 0.94
RNF223E7ERA6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF223E7ERA6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF223E7ERA6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF223E7ERA6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RNF223E7ERA6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF223E7ERA6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF223E7ERA6 AC026202.3-201ENST00000600805 1127 ntBASIC20.93■□□□□ 0.94
RNF223E7ERA6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF223E7ERA6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF223E7ERA6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF223E7ERA6 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF223E7ERA6 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF223E7ERA6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF223E7ERA6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF223E7ERA6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF223E7ERA6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RNF223E7ERA6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF223E7ERA6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF223E7ERA6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF223E7ERA6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF223E7ERA6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF223E7ERA6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RNF223E7ERA6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.91■□□□□ 0.94
RNF223E7ERA6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF223E7ERA6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
RNF223E7ERA6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF223E7ERA6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF223E7ERA6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF223E7ERA6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF223E7ERA6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.9■□□□□ 0.94
RNF223E7ERA6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
RNF223E7ERA6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF223E7ERA6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF223E7ERA6 DUX4L9-201ENST00000449051 1259 ntBASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms