Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TRBV6-4A0A1B0GX49 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV6-4A0A1B0GX49 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV6-4A0A1B0GX49 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.73■□□□□ 0.43
TRBV6-4A0A1B0GX49 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV6-4A0A1B0GX49 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV6-4A0A1B0GX49 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-4A0A1B0GX49 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-4A0A1B0GX49 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-4A0A1B0GX49 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-4A0A1B0GX49 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-4A0A1B0GX49 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRBV6-4A0A1B0GX49 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
TRBV6-4A0A1B0GX49 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-4A0A1B0GX49 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-4A0A1B0GX49 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV6-4A0A1B0GX49 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV6-4A0A1B0GX49 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TRBV6-4A0A1B0GX49 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.71■□□□□ 0.43
TRBV6-4A0A1B0GX49 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.71■□□□□ 0.43
TRBV6-4A0A1B0GX49 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV6-4A0A1B0GX49 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-4A0A1B0GX49 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRBV6-4A0A1B0GX49 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-4A0A1B0GX49 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.7■□□□□ 0.42
TRBV6-4A0A1B0GX49 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.7■□□□□ 0.42
TRBV6-4A0A1B0GX49 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.7■□□□□ 0.42
TRBV6-4A0A1B0GX49 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TRBV6-4A0A1B0GX49 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC17.7■□□□□ 0.42
TRBV6-4A0A1B0GX49 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-4A0A1B0GX49 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV6-4A0A1B0GX49 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRBV6-4A0A1B0GX49 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-4A0A1B0GX49 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17.69■□□□□ 0.42
TRBV6-4A0A1B0GX49 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV6-4A0A1B0GX49 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.69■□□□□ 0.42
TRBV6-4A0A1B0GX49 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.69■□□□□ 0.42
TRBV6-4A0A1B0GX49 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-4A0A1B0GX49 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV6-4A0A1B0GX49 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-4A0A1B0GX49 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-4A0A1B0GX49 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.68■□□□□ 0.42
TRBV6-4A0A1B0GX49 LINC01971-201ENST00000617888 1048 ntBASIC17.68■□□□□ 0.42
TRBV6-4A0A1B0GX49 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-4A0A1B0GX49 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV6-4A0A1B0GX49 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRBV6-4A0A1B0GX49 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV6-4A0A1B0GX49 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRBV6-4A0A1B0GX49 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.67■□□□□ 0.42
TRBV6-4A0A1B0GX49 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRBV6-4A0A1B0GX49 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV6-4A0A1B0GX49 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV6-4A0A1B0GX49 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRBV6-4A0A1B0GX49 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV6-4A0A1B0GX49 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV6-4A0A1B0GX49 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV6-4A0A1B0GX49 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV6-4A0A1B0GX49 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV6-4A0A1B0GX49 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.65■□□□□ 0.42
TRBV6-4A0A1B0GX49 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV6-4A0A1B0GX49 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.64■□□□□ 0.41
TRBV6-4A0A1B0GX49 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
TRBV6-4A0A1B0GX49 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRBV6-4A0A1B0GX49 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV6-4A0A1B0GX49 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV6-4A0A1B0GX49 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV6-4A0A1B0GX49 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRBV6-4A0A1B0GX49 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRBV6-4A0A1B0GX49 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17.63■□□□□ 0.41
TRBV6-4A0A1B0GX49 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.63■□□□□ 0.41
TRBV6-4A0A1B0GX49 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV6-4A0A1B0GX49 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
TRBV6-4A0A1B0GX49 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV6-4A0A1B0GX49 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRBV6-4A0A1B0GX49 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV6-4A0A1B0GX49 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRBV6-4A0A1B0GX49 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV6-4A0A1B0GX49 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV6-4A0A1B0GX49 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV6-4A0A1B0GX49 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.61■□□□□ 0.41
TRBV6-4A0A1B0GX49 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRBV6-4A0A1B0GX49 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.6■□□□□ 0.41
TRBV6-4A0A1B0GX49 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV6-4A0A1B0GX49 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV6-4A0A1B0GX49 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.6■□□□□ 0.41
TRBV6-4A0A1B0GX49 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.6■□□□□ 0.41
TRBV6-4A0A1B0GX49 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.6■□□□□ 0.41
TRBV6-4A0A1B0GX49 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV6-4A0A1B0GX49 DUX4L13-201ENST00000554103 1267 ntBASIC17.59■□□□□ 0.41
TRBV6-4A0A1B0GX49 DUX4L15-201ENST00000611059 1267 ntBASIC17.59■□□□□ 0.41
TRBV6-4A0A1B0GX49 DUX4L23-201ENST00000615195 1269 ntBASIC17.59■□□□□ 0.41
TRBV6-4A0A1B0GX49 DUX4L24-201ENST00000617576 1269 ntBASIC17.59■□□□□ 0.41
TRBV6-4A0A1B0GX49 DUX4L22-201ENST00000618238 1269 ntBASIC17.59■□□□□ 0.41
TRBV6-4A0A1B0GX49 DUX4L20-201ENST00000619712 1269 ntBASIC17.59■□□□□ 0.41
TRBV6-4A0A1B0GX49 DUX4L21-201ENST00000622058 1269 ntBASIC17.59■□□□□ 0.41
TRBV6-4A0A1B0GX49 DUX4L10-201ENST00000622460 1267 ntBASIC17.59■□□□□ 0.41
TRBV6-4A0A1B0GX49 DUX4L25-201ENST00000624915 1269 ntBASIC17.59■□□□□ 0.41
TRBV6-4A0A1B0GX49 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.59■□□□□ 0.41
TRBV6-4A0A1B0GX49 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.59■□□□□ 0.41
TRBV6-4A0A1B0GX49 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms