Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRBV11-1A0A0K0K1C0 MIR219A2-201ENST00000608502 1504 ntBASIC23.43■■□□□ 1.34
TRBV11-1A0A0K0K1C0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRBV11-1A0A0K0K1C0 AP002414.2-202ENST00000590929 1450 ntBASIC23.43■■□□□ 1.34
TRBV11-1A0A0K0K1C0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRBV11-1A0A0K0K1C0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRBV11-1A0A0K0K1C0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.41■■□□□ 1.34
TRBV11-1A0A0K0K1C0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
TRBV11-1A0A0K0K1C0 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRBV11-1A0A0K0K1C0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.41■■□□□ 1.34
TRBV11-1A0A0K0K1C0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TRBV11-1A0A0K0K1C0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRBV11-1A0A0K0K1C0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TRBV11-1A0A0K0K1C0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRBV11-1A0A0K0K1C0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.41■■□□□ 1.34
TRBV11-1A0A0K0K1C0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRBV11-1A0A0K0K1C0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
TRBV11-1A0A0K0K1C0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRBV11-1A0A0K0K1C0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRBV11-1A0A0K0K1C0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRBV11-1A0A0K0K1C0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRBV11-1A0A0K0K1C0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRBV11-1A0A0K0K1C0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TRBV11-1A0A0K0K1C0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TRBV11-1A0A0K0K1C0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TRBV11-1A0A0K0K1C0 HSD17B1P1-201ENST00000590052 955 ntBASIC23.39■■□□□ 1.33
TRBV11-1A0A0K0K1C0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRBV11-1A0A0K0K1C0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRBV11-1A0A0K0K1C0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRBV11-1A0A0K0K1C0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
TRBV11-1A0A0K0K1C0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRBV11-1A0A0K0K1C0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.38■■□□□ 1.33
TRBV11-1A0A0K0K1C0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRBV11-1A0A0K0K1C0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.37■■□□□ 1.33
TRBV11-1A0A0K0K1C0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.37■■□□□ 1.33
TRBV11-1A0A0K0K1C0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.37■■□□□ 1.33
TRBV11-1A0A0K0K1C0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRBV11-1A0A0K0K1C0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRBV11-1A0A0K0K1C0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
TRBV11-1A0A0K0K1C0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRBV11-1A0A0K0K1C0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
TRBV11-1A0A0K0K1C0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
TRBV11-1A0A0K0K1C0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRBV11-1A0A0K0K1C0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRBV11-1A0A0K0K1C0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRBV11-1A0A0K0K1C0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRBV11-1A0A0K0K1C0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRBV11-1A0A0K0K1C0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.35■■□□□ 1.33
TRBV11-1A0A0K0K1C0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
TRBV11-1A0A0K0K1C0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
TRBV11-1A0A0K0K1C0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRBV11-1A0A0K0K1C0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRBV11-1A0A0K0K1C0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRBV11-1A0A0K0K1C0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRBV11-1A0A0K0K1C0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRBV11-1A0A0K0K1C0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRBV11-1A0A0K0K1C0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRBV11-1A0A0K0K1C0 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRBV11-1A0A0K0K1C0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TRBV11-1A0A0K0K1C0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TRBV11-1A0A0K0K1C0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
TRBV11-1A0A0K0K1C0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
TRBV11-1A0A0K0K1C0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRBV11-1A0A0K0K1C0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRBV11-1A0A0K0K1C0 GPX1-201ENST00000419349 1106 ntBASIC23.32■■□□□ 1.32
TRBV11-1A0A0K0K1C0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRBV11-1A0A0K0K1C0 DRD5P2-201ENST00000421395 2012 ntBASIC23.32■■□□□ 1.32
TRBV11-1A0A0K0K1C0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.31■■□□□ 1.32
TRBV11-1A0A0K0K1C0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
TRBV11-1A0A0K0K1C0 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRBV11-1A0A0K0K1C0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRBV11-1A0A0K0K1C0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
TRBV11-1A0A0K0K1C0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.3■■□□□ 1.32
TRBV11-1A0A0K0K1C0 AC022413.1-201ENST00000624602 984 ntBASIC23.3■■□□□ 1.32
TRBV11-1A0A0K0K1C0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRBV11-1A0A0K0K1C0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
TRBV11-1A0A0K0K1C0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.29■■□□□ 1.32
TRBV11-1A0A0K0K1C0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRBV11-1A0A0K0K1C0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRBV11-1A0A0K0K1C0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.28■■□□□ 1.32
TRBV11-1A0A0K0K1C0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
TRBV11-1A0A0K0K1C0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.28■■□□□ 1.32
TRBV11-1A0A0K0K1C0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRBV11-1A0A0K0K1C0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.28■■□□□ 1.32
TRBV11-1A0A0K0K1C0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRBV11-1A0A0K0K1C0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.27■■□□□ 1.32
TRBV11-1A0A0K0K1C0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.27■■□□□ 1.32
TRBV11-1A0A0K0K1C0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.26■■□□□ 1.31
TRBV11-1A0A0K0K1C0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.26■■□□□ 1.31
TRBV11-1A0A0K0K1C0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.26■■□□□ 1.31
TRBV11-1A0A0K0K1C0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRBV11-1A0A0K0K1C0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TRBV11-1A0A0K0K1C0 AC018358.1-201ENST00000631079 1402 ntBASIC23.25■■□□□ 1.31
TRBV11-1A0A0K0K1C0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRBV11-1A0A0K0K1C0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.25■■□□□ 1.31
TRBV11-1A0A0K0K1C0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRBV11-1A0A0K0K1C0 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRBV11-1A0A0K0K1C0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.25■■□□□ 1.31
TRBV11-1A0A0K0K1C0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
TRBV11-1A0A0K0K1C0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms