Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.01■■□□□ 1.27
TRAV17A0A0B4J275 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.01■■□□□ 1.27
TRAV17A0A0B4J275 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.01■■□□□ 1.27
TRAV17A0A0B4J275 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRAV17A0A0B4J275 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
TRAV17A0A0B4J275 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
TRAV17A0A0B4J275 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.01■■□□□ 1.27
TRAV17A0A0B4J275 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.01■■□□□ 1.27
TRAV17A0A0B4J275 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRAV17A0A0B4J275 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRAV17A0A0B4J275 AC018358.1-201ENST00000631079 1402 ntBASIC22.99■■□□□ 1.27
TRAV17A0A0B4J275 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.99■■□□□ 1.27
TRAV17A0A0B4J275 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.98■■□□□ 1.27
TRAV17A0A0B4J275 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRAV17A0A0B4J275 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 AL157400.5-201ENST00000507624 621 ntBASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 AL033527.3-201ENST00000566366 1196 ntBASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.96■■□□□ 1.27
TRAV17A0A0B4J275 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.95■■□□□ 1.26
TRAV17A0A0B4J275 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.95■■□□□ 1.26
TRAV17A0A0B4J275 KRT18P60-201ENST00000312876 1297 ntBASIC22.94■■□□□ 1.26
TRAV17A0A0B4J275 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRAV17A0A0B4J275 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRAV17A0A0B4J275 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.93■■□□□ 1.26
TRAV17A0A0B4J275 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC22.93■■□□□ 1.26
TRAV17A0A0B4J275 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.93■■□□□ 1.26
TRAV17A0A0B4J275 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TRAV17A0A0B4J275 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRAV17A0A0B4J275 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
TRAV17A0A0B4J275 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.93■■□□□ 1.26
TRAV17A0A0B4J275 TSPY13P-201ENST00000338964 914 ntBASIC22.93■■□□□ 1.26
TRAV17A0A0B4J275 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRAV17A0A0B4J275 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
TRAV17A0A0B4J275 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
TRAV17A0A0B4J275 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRAV17A0A0B4J275 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TRAV17A0A0B4J275 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TRAV17A0A0B4J275 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.92■■□□□ 1.26
TRAV17A0A0B4J275 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
TRAV17A0A0B4J275 AL359258.2-201ENST00000564063 1566 ntBASIC22.92■■□□□ 1.26
TRAV17A0A0B4J275 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
TRAV17A0A0B4J275 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.91■■□□□ 1.26
TRAV17A0A0B4J275 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.91■■□□□ 1.26
TRAV17A0A0B4J275 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.91■■□□□ 1.26
TRAV17A0A0B4J275 AC007029.1-201ENST00000604183 313 ntBASIC22.91■■□□□ 1.26
TRAV17A0A0B4J275 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.91■■□□□ 1.26
TRAV17A0A0B4J275 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRAV17A0A0B4J275 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TRAV17A0A0B4J275 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TRAV17A0A0B4J275 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.9■■□□□ 1.26
TRAV17A0A0B4J275 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRAV17A0A0B4J275 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRAV17A0A0B4J275 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRAV17A0A0B4J275 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRAV17A0A0B4J275 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
TRAV17A0A0B4J275 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
TRAV17A0A0B4J275 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
TRAV17A0A0B4J275 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRAV17A0A0B4J275 AC004987.1-201ENST00000428627 508 ntBASIC22.88■■□□□ 1.25
TRAV17A0A0B4J275 ATP5G2P3-201ENST00000429083 425 ntBASIC22.88■■□□□ 1.25
TRAV17A0A0B4J275 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TRAV17A0A0B4J275 AL139393.2-201ENST00000608721 2025 ntBASIC22.87■■□□□ 1.25
TRAV17A0A0B4J275 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.87■■□□□ 1.25
TRAV17A0A0B4J275 SMPD5-203ENST00000639008 1464 ntBASIC22.86■■□□□ 1.25
TRAV17A0A0B4J275 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TRAV17A0A0B4J275 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
TRAV17A0A0B4J275 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRAV17A0A0B4J275 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRAV17A0A0B4J275 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRAV17A0A0B4J275 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.85■■□□□ 1.25
TRAV17A0A0B4J275 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.85■■□□□ 1.25
TRAV17A0A0B4J275 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
TRAV17A0A0B4J275 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRAV17A0A0B4J275 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRAV17A0A0B4J275 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRAV17A0A0B4J275 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TRAV17A0A0B4J275 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.84■■□□□ 1.25
TRAV17A0A0B4J275 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRAV17A0A0B4J275 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRAV17A0A0B4J275 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.83■■□□□ 1.25
TRAV17A0A0B4J275 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TRAV17A0A0B4J275 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TRAV17A0A0B4J275 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.83■■□□□ 1.25
TRAV17A0A0B4J275 ABCB10P3-201ENST00000561950 2166 ntBASIC22.83■■□□□ 1.24
TRAV17A0A0B4J275 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.82■■□□□ 1.24
TRAV17A0A0B4J275 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRAV17A0A0B4J275 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.82■■□□□ 1.24
TRAV17A0A0B4J275 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRAV17A0A0B4J275 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRAV17A0A0B4J275 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms