Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.01■■□□□ 1.27
TRAV17A0A0B4J275 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.01■■□□□ 1.27
TRAV17A0A0B4J275 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.01■■□□□ 1.27
TRAV17A0A0B4J275 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRAV17A0A0B4J275 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
TRAV17A0A0B4J275 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
TRAV17A0A0B4J275 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.01■■□□□ 1.27
TRAV17A0A0B4J275 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.01■■□□□ 1.27
TRAV17A0A0B4J275 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRAV17A0A0B4J275 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRAV17A0A0B4J275 AC018358.1-201ENST00000631079 1402 ntBASIC22.99■■□□□ 1.27
TRAV17A0A0B4J275 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.99■■□□□ 1.27
TRAV17A0A0B4J275 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.98■■□□□ 1.27
TRAV17A0A0B4J275 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRAV17A0A0B4J275 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 AL157400.5-201ENST00000507624 621 ntBASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 AL033527.3-201ENST00000566366 1196 ntBASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRAV17A0A0B4J275 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.96■■□□□ 1.27
TRAV17A0A0B4J275 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.95■■□□□ 1.26
TRAV17A0A0B4J275 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.95■■□□□ 1.26
TRAV17A0A0B4J275 KRT18P60-201ENST00000312876 1297 ntBASIC22.94■■□□□ 1.26
TRAV17A0A0B4J275 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRAV17A0A0B4J275 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRAV17A0A0B4J275 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.93■■□□□ 1.26
TRAV17A0A0B4J275 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC22.93■■□□□ 1.26
TRAV17A0A0B4J275 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.93■■□□□ 1.26
TRAV17A0A0B4J275 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TRAV17A0A0B4J275 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRAV17A0A0B4J275 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
TRAV17A0A0B4J275 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.93■■□□□ 1.26
TRAV17A0A0B4J275 TSPY13P-201ENST00000338964 914 ntBASIC22.93■■□□□ 1.26
TRAV17A0A0B4J275 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRAV17A0A0B4J275 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
TRAV17A0A0B4J275 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
TRAV17A0A0B4J275 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRAV17A0A0B4J275 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TRAV17A0A0B4J275 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TRAV17A0A0B4J275 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.92■■□□□ 1.26
TRAV17A0A0B4J275 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
TRAV17A0A0B4J275 AL359258.2-201ENST00000564063 1566 ntBASIC22.92■■□□□ 1.26
TRAV17A0A0B4J275 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
TRAV17A0A0B4J275 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.91■■□□□ 1.26
TRAV17A0A0B4J275 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.91■■□□□ 1.26
TRAV17A0A0B4J275 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.91■■□□□ 1.26
TRAV17A0A0B4J275 AC007029.1-201ENST00000604183 313 ntBASIC22.91■■□□□ 1.26
TRAV17A0A0B4J275 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.91■■□□□ 1.26
TRAV17A0A0B4J275 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRAV17A0A0B4J275 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TRAV17A0A0B4J275 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TRAV17A0A0B4J275 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.9■■□□□ 1.26
TRAV17A0A0B4J275 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRAV17A0A0B4J275 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRAV17A0A0B4J275 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRAV17A0A0B4J275 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRAV17A0A0B4J275 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
TRAV17A0A0B4J275 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
TRAV17A0A0B4J275 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
TRAV17A0A0B4J275 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRAV17A0A0B4J275 AC004987.1-201ENST00000428627 508 ntBASIC22.88■■□□□ 1.25
TRAV17A0A0B4J275 ATP5G2P3-201ENST00000429083 425 ntBASIC22.88■■□□□ 1.25
TRAV17A0A0B4J275 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TRAV17A0A0B4J275 AL139393.2-201ENST00000608721 2025 ntBASIC22.87■■□□□ 1.25
TRAV17A0A0B4J275 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.87■■□□□ 1.25
TRAV17A0A0B4J275 SMPD5-203ENST00000639008 1464 ntBASIC22.86■■□□□ 1.25
TRAV17A0A0B4J275 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TRAV17A0A0B4J275 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
TRAV17A0A0B4J275 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRAV17A0A0B4J275 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRAV17A0A0B4J275 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRAV17A0A0B4J275 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.85■■□□□ 1.25
TRAV17A0A0B4J275 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.85■■□□□ 1.25
TRAV17A0A0B4J275 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
TRAV17A0A0B4J275 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRAV17A0A0B4J275 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRAV17A0A0B4J275 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRAV17A0A0B4J275 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TRAV17A0A0B4J275 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.84■■□□□ 1.25
TRAV17A0A0B4J275 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRAV17A0A0B4J275 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRAV17A0A0B4J275 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.83■■□□□ 1.25
TRAV17A0A0B4J275 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TRAV17A0A0B4J275 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TRAV17A0A0B4J275 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.83■■□□□ 1.25
TRAV17A0A0B4J275 ABCB10P3-201ENST00000561950 2166 ntBASIC22.83■■□□□ 1.24
TRAV17A0A0B4J275 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.82■■□□□ 1.24
TRAV17A0A0B4J275 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRAV17A0A0B4J275 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.82■■□□□ 1.24
TRAV17A0A0B4J275 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRAV17A0A0B4J275 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRAV17A0A0B4J275 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms