RNA–Protein interactions for RNA: ENST00000641812.1

CCDC196-212, Transcript of coiled-coil domain containing 196, humanhuman

Gene CCDC196, Length 1,635 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-212ENST00000641812 AEBP2Q6ZN18 517 aaPredicted RBP17.77■□□□□ 0.44
CCDC196-212ENST00000641812 CHIC1Q5VXU3 224 aa17.39■□□□□ 0.38
CCDC196-212ENST00000641812 PHF23Q9BUL5 403 aaPredicted RBP15.35■□□□□ 0.05
CCDC196-212ENST00000641812 SENP3Q9H4L4 574 aaPredicted RBP15□□□□□ -0.01
CCDC196-212ENST00000641812 PLPPR3Q6T4P5 718 aa14.13□□□□□ -0.15
CCDC196-212ENST00000641812 FOXD1Q16676 465 aa13.96□□□□□ -0.17
CCDC196-212ENST00000641812 NISCHQ9Y2I1 1504 aa13.81□□□□□ -0.2
CCDC196-212ENST00000641812 PPP6R1Q9UPN7 881 aa13.52□□□□□ -0.25
CCDC196-212ENST00000641812 ADRA2BP18089 450 aa13.5□□□□□ -0.25
CCDC196-212ENST00000641812 PIAS4Q8N2W9 510 aaPredicted RBP13.16□□□□□ -0.3
CCDC196-212ENST00000641812 MSH5O43196 834 aa12.78□□□□□ -0.36
CCDC196-212ENST00000641812 PPP4R3CPQ6ZMV5 832 aa12.5□□□□□ -0.41
CCDC196-212ENST00000641812 KCNA4P22459 653 aa12.32□□□□□ -0.44
CCDC196-212ENST00000641812 SCAF1Q9H7N4 1312 aaKnown RBP12.28□□□□□ -0.44
CCDC196-212ENST00000641812 MAPK8IP2Q13387 824 aaPredicted RBP12.25□□□□□ -0.45
CCDC196-212ENST00000641812 NCBP3Q53F19 620 aaKnown RBP12.15□□□□□ -0.47
CCDC196-212ENST00000641812 CNKSR2Q8WXI2 1034 aa12.1□□□□□ -0.47
CCDC196-212ENST00000641812 NPM3O75607 178 aaKnown RBP12.02□□□□□ -0.49
CCDC196-212ENST00000641812 DMRT2Q9Y5R5 561 aa12.01□□□□□ -0.49
CCDC196-212ENST00000641812 CCDC180Q9P1Z9 1646 aa11.95□□□□□ -0.5
CCDC196-212ENST00000641812 RNF216Q9NWF9 866 aaPredicted RBP11.84□□□□□ -0.51
CCDC196-212ENST00000641812 HOXD11P31277 338 aaPredicted RBP11.78□□□□□ -0.52
CCDC196-212ENST00000641812 SLC4A1APQ9BWU0 796 aaKnown RBP11.72□□□□□ -0.53
CCDC196-212ENST00000641812 ZCCHC6Q5VYS8 1495 aaKnown RBP11.7□□□□□ -0.54
CCDC196-212ENST00000641812 DNAJC5BQ9UF47 199 aa11.6□□□□□ -0.55
CCDC196-212ENST00000641812 POTEDQ86YR6 584 aa11.55□□□□□ -0.56
CCDC196-212ENST00000641812 EHMT2Q96KQ7 1210 aa11.55□□□□□ -0.56
CCDC196-212ENST00000641812 DCAF1Q9Y4B6 1507 aa11.51□□□□□ -0.57
CCDC196-212ENST00000641812 DCAF8L1A6NGE4 600 aa11.49□□□□□ -0.57
CCDC196-212ENST00000641812 SHROOM4Q9ULL8 1493 aa11.49□□□□□ -0.57
CCDC196-212ENST00000641812 SUPT5HO00267 1087 aaKnown RBP11.36□□□□□ -0.59
CCDC196-212ENST00000641812 ZBTB22O15209 634 aa11.35□□□□□ -0.59
CCDC196-212ENST00000641812 SLC4A2P04920 1241 aa11.35□□□□□ -0.59
CCDC196-212ENST00000641812 CSRNP3Q8WYN3 585 aa11.34□□□□□ -0.59
CCDC196-212ENST00000641812 FOXD4L1Q9NU39 408 aa11.27□□□□□ -0.6
CCDC196-212ENST00000641812 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.24□□□□□ -0.61
CCDC196-212ENST00000641812 MYO15BQ96JP2 1530 aa11.2□□□□□ -0.62
CCDC196-212ENST00000641812 DCAF8L2P0C7V8 631 aa11.18□□□□□ -0.62
CCDC196-212ENST00000641812 ABCC9O60706 1549 aa11.08□□□□□ -0.64
CCDC196-212ENST00000641812 U3KPZ7 1027 aaPredicted RBP11.08□□□□□ -0.64
CCDC196-212ENST00000641812 MYCNP04198 464 aaPredicted RBP11.07□□□□□ -0.64
CCDC196-212ENST00000641812 RNF39Q9H2S5 420 aa10.98□□□□□ -0.65
CCDC196-212ENST00000641812 NACADO15069 1562 aa10.97□□□□□ -0.65
CCDC196-212ENST00000641812 HRCP23327 699 aa10.95□□□□□ -0.66
CCDC196-212ENST00000641812 SCRIBQ14160 1630 aa10.91□□□□□ -0.66
CCDC196-212ENST00000641812 RB1CC1Q8TDY2 1594 aa10.9□□□□□ -0.66
CCDC196-212ENST00000641812 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.9□□□□□ -0.66
CCDC196-212ENST00000641812 HNRNPUL2Q1KMD3 747 aaKnown RBP10.9□□□□□ -0.66
CCDC196-212ENST00000641812 SAMD1Q6SPF0 538 aaPredicted RBP10.88□□□□□ -0.67
CCDC196-212ENST00000641812 ATXN8OSP0DMR3 200 aa10.85□□□□□ -0.67
CCDC196-212ENST00000641812 RSF1Q96T23 1441 aaPredicted RBP10.85□□□□□ -0.67
CCDC196-212ENST00000641812 C1QBPQ07021 282 aaKnown RBP10.84□□□□□ -0.67
CCDC196-212ENST00000641812 ATF5Q9Y2D1 282 aaPredicted RBP10.84□□□□□ -0.67
CCDC196-212ENST00000641812 PCGF6Q9BYE7 350 aa10.8□□□□□ -0.68
CCDC196-212ENST00000641812 TRIM26Q12899 539 aaPredicted RBP10.78□□□□□ -0.68
CCDC196-212ENST00000641812 ZEB1P37275 1124 aaPredicted RBP10.76□□□□□ -0.69
CCDC196-212ENST00000641812 SPINK5Q9NQ38 1064 aaPredicted RBP10.76□□□□□ -0.69
CCDC196-212ENST00000641812 APLP2Q06481 763 aa10.75□□□□□ -0.69
CCDC196-212ENST00000641812 TRIM41Q8WV44 630 aa10.73□□□□□ -0.69
CCDC196-212ENST00000641812 BAZ1AQ9NRL2 1556 aaPredicted RBP10.69□□□□□ -0.7
CCDC196-212ENST00000641812 CAPN15O75808 1086 aa10.69□□□□□ -0.7
CCDC196-212ENST00000641812 LOC105371045A0A1W2PR82 267 aa10.66□□□□□ -0.7
CCDC196-212ENST00000641812 TRHP20396 242 aaPredicted RBP10.66□□□□□ -0.7
CCDC196-212ENST00000641812 CACNB1Q02641 598 aaPredicted RBP10.65□□□□□ -0.7
CCDC196-212ENST00000641812 MROH2BQ7Z745 1585 aa10.62□□□□□ -0.71
CCDC196-212ENST00000641812 ZNF219Q9P2Y4 722 aaPredicted RBP10.62□□□□□ -0.71
CCDC196-212ENST00000641812 WIZO95785 1651 aa10.61□□□□□ -0.71
CCDC196-212ENST00000641812 CECR2Q9BXF3 1484 aa10.57□□□□□ -0.72
CCDC196-212ENST00000641812 TOP2AP11388 1531 aaKnown RBP10.57□□□□□ -0.72
CCDC196-212ENST00000641812 SMARCA4P51532 1647 aa10.54□□□□□ -0.72
CCDC196-212ENST00000641812 UNC13AQ9UPW8 1703 aa10.53□□□□□ -0.72
CCDC196-212ENST00000641812 EIF4G1Q04637 1599 aaKnown RBP10.53□□□□□ -0.72
CCDC196-212ENST00000641812 ABCB7O75027 752 aa10.51□□□□□ -0.73
CCDC196-212ENST00000641812 POLA2Q14181 598 aa10.51□□□□□ -0.73
CCDC196-212ENST00000641812 EEA1Q15075 1411 aa10.5□□□□□ -0.73
CCDC196-212ENST00000641812 DSG3P32926 999 aa10.5□□□□□ -0.73
CCDC196-212ENST00000641812 SMARCA2P51531 1590 aa10.44□□□□□ -0.74
CCDC196-212ENST00000641812 PPARGC1BQ86YN6 1023 aaKnown RBP10.43□□□□□ -0.74
CCDC196-212ENST00000641812 FAM9AQ8IZU1 332 aaPredicted RBP10.43□□□□□ -0.74
CCDC196-212ENST00000641812 PEG3Q9GZU2 1588 aa10.41□□□□□ -0.74
CCDC196-212ENST00000641812 WRNQ14191 1432 aaPredicted RBP eCLIP10.4□□□□□ -0.74
CCDC196-212ENST00000641812 CCDC88BA6NC98 1476 aa10.4□□□□□ -0.75
CCDC196-212ENST00000641812 MKRN4PQ13434 485 aaPredicted RBP10.36□□□□□ -0.75
CCDC196-212ENST00000641812 TNIKQ9UKE5 1360 aa10.35□□□□□ -0.75
CCDC196-212ENST00000641812 ABCC8Q09428 1581 aa10.32□□□□□ -0.76
CCDC196-212ENST00000641812 PELP1Q8IZL8 1130 aaKnown RBP10.31□□□□□ -0.76
CCDC196-212ENST00000641812 GOLGA3Q08378 1498 aa10.31□□□□□ -0.76
CCDC196-212ENST00000641812 FBLN2P98095 1184 aa10.3□□□□□ -0.76
CCDC196-212ENST00000641812 KIF21BO75037 1637 aa10.29□□□□□ -0.76
CCDC196-212ENST00000641812 CEP162Q5TB80 1403 aa10.29□□□□□ -0.76
CCDC196-212ENST00000641812 BICRAQ9NZM4 1560 aa10.29□□□□□ -0.76
CCDC196-212ENST00000641812 ZBTB12Q9Y330 459 aaPredicted RBP10.29□□□□□ -0.76
CCDC196-212ENST00000641812 CEP164Q9UPV0 1460 aa10.26□□□□□ -0.77
CCDC196-212ENST00000641812 CCER1Q8TC90 406 aaPredicted RBP10.25□□□□□ -0.77
CCDC196-212ENST00000641812 BAZ1BQ9UIG0 1483 aaKnown RBP10.25□□□□□ -0.77
CCDC196-212ENST00000641812 FKBP8Q14318 412 aa10.23□□□□□ -0.77
CCDC196-212ENST00000641812 UBTFP17480 764 aaKnown RBP10.2□□□□□ -0.78
CCDC196-212ENST00000641812 SOGA1O94964 1423 aa10.19□□□□□ -0.78
CCDC196-212ENST00000641812 ATAD2BQ9ULI0 1458 aa10.19□□□□□ -0.78
CCDC196-212ENST00000641812 BIVM-ERCC5R4GMW8 1640 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms