RNA–Protein interactions for RNA: ENST00000641012.1

MACF1-234, Transcript of microtubule-actin crosslinking factor 1, humanhuman

BASIC

Gene MACF1, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-234ENST00000641012 NISCHQ9Y2I1 1504 aa20.5■□□□□ 0.87
MACF1-234ENST00000641012 DCAF8L2P0C7V8 631 aa20.41■□□□□ 0.86
MACF1-234ENST00000641012 SHROOM4Q9ULL8 1493 aa18.96■□□□□ 0.63
MACF1-234ENST00000641012 SUPT5HO00267 1087 aaKnown RBP18.9■□□□□ 0.62
MACF1-234ENST00000641012 EHMT2Q96KQ7 1210 aa18.08■□□□□ 0.48
MACF1-234ENST00000641012 ABCC9O60706 1549 aa17.98■□□□□ 0.47
MACF1-234ENST00000641012 FAM9AQ8IZU1 332 aaPredicted RBP17.77■□□□□ 0.44
MACF1-234ENST00000641012 PABPN1Q86U42 306 aaKnown RBP eCLIP17.67■□□□□ 0.42
MACF1-234ENST00000641012 TRIM41Q8WV44 630 aa17.53■□□□□ 0.4
MACF1-234ENST00000641012 RANGAP1P46060 587 aaPredicted RBP17.49■□□□□ 0.39
MACF1-234ENST00000641012 APLP2Q06481 763 aa17.46■□□□□ 0.39
MACF1-234ENST00000641012 TTBK1Q5TCY1 1321 aaPredicted RBP17.31■□□□□ 0.36
MACF1-234ENST00000641012 UBTFP17480 764 aaKnown RBP17.26■□□□□ 0.35
MACF1-234ENST00000641012 ATP1B4Q9UN42 357 aaPredicted RBP17.25■□□□□ 0.35
MACF1-234ENST00000641012 CCDC180Q9P1Z9 1646 aa17■□□□□ 0.31
MACF1-234ENST00000641012 ZCCHC6Q5VYS8 1495 aaKnown RBP16.93■□□□□ 0.3
MACF1-234ENST00000641012 SCRIBQ14160 1630 aa16.93■□□□□ 0.3
MACF1-234ENST00000641012 CHIC1Q5VXU3 224 aa16.87■□□□□ 0.29
MACF1-234ENST00000641012 PCGF6Q9BYE7 350 aa16.84■□□□□ 0.29
MACF1-234ENST00000641012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.84■□□□□ 0.29
MACF1-234ENST00000641012 HNRNPUL2Q1KMD3 747 aaKnown RBP16.84■□□□□ 0.29
MACF1-234ENST00000641012 PPARGC1BQ86YN6 1023 aaKnown RBP16.81■□□□□ 0.28
MACF1-234ENST00000641012 LOC105371045A0A1W2PR82 267 aa16.76■□□□□ 0.27
MACF1-234ENST00000641012 RB1CC1Q8TDY2 1594 aa16.72■□□□□ 0.27
MACF1-234ENST00000641012 FBLN2P98095 1184 aa16.71■□□□□ 0.27
MACF1-234ENST00000641012 MYT1LQ9UL68 1186 aa16.64■□□□□ 0.25
MACF1-234ENST00000641012 NACADO15069 1562 aa16.57■□□□□ 0.24
MACF1-234ENST00000641012 ITGAEP38570 1179 aa16.56■□□□□ 0.24
MACF1-234ENST00000641012 CCER1Q8TC90 406 aaPredicted RBP16.55■□□□□ 0.24
MACF1-234ENST00000641012 P3H3Q8IVL6 736 aa16.35■□□□□ 0.21
MACF1-234ENST00000641012 CSRNP3Q8WYN3 585 aa16.34■□□□□ 0.21
MACF1-234ENST00000641012 ARID3CA6NKF2 412 aa16.31■□□□□ 0.2
MACF1-234ENST00000641012 TRIM26Q12899 539 aaPredicted RBP16.28■□□□□ 0.2
MACF1-234ENST00000641012 RSF1Q96T23 1441 aaPredicted RBP16.26■□□□□ 0.19
MACF1-234ENST00000641012 FAM50AQ14320 339 aaKnown RBP16.23■□□□□ 0.19
MACF1-234ENST00000641012 DCAF1Q9Y4B6 1507 aa16.23■□□□□ 0.19
MACF1-234ENST00000641012 ZEB1P37275 1124 aaPredicted RBP16.2■□□□□ 0.18
MACF1-234ENST00000641012 BAZ1BQ9UIG0 1483 aaKnown RBP16.2■□□□□ 0.18
MACF1-234ENST00000641012 CECR2Q9BXF3 1484 aa16.19■□□□□ 0.18
MACF1-234ENST00000641012 CHMP7Q8WUX9 453 aaPredicted RBP16.12■□□□□ 0.17
MACF1-234ENST00000641012 BAZ1AQ9NRL2 1556 aaPredicted RBP16.07■□□□□ 0.16
MACF1-234ENST00000641012 TRIM52Q96A61 297 aa16.04■□□□□ 0.16
MACF1-234ENST00000641012 NPM1P06748 294 aaKnown RBP eCLIP16.04■□□□□ 0.16
MACF1-234ENST00000641012 POLR3GLQ9BT43 218 aa16.04■□□□□ 0.16
MACF1-234ENST00000641012 ERCC6Q03468 1493 aa16.03■□□□□ 0.16
MACF1-234ENST00000641012 ZNF777Q9ULD5 760 aaPredicted RBP16.02■□□□□ 0.15
MACF1-234ENST00000641012 CDK11AQ9UQ88 783 aaPredicted RBP16■□□□□ 0.15
MACF1-234ENST00000641012 WRNQ14191 1432 aaPredicted RBP eCLIP15.92■□□□□ 0.14
MACF1-234ENST00000641012 MYO15BQ96JP2 1530 aa15.91■□□□□ 0.14
MACF1-234ENST00000641012 MROH2BQ7Z745 1585 aa15.91■□□□□ 0.14
MACF1-234ENST00000641012 CNGB1Q14028 1251 aaPredicted RBP15.9■□□□□ 0.14
MACF1-234ENST00000641012 NEUROD1Q13562 356 aa15.85■□□□□ 0.13
MACF1-234ENST00000641012 SLC4A1APQ9BWU0 796 aaKnown RBP15.82■□□□□ 0.12
MACF1-234ENST00000641012 ZNF326Q5BKZ1 582 aaKnown RBP15.8■□□□□ 0.12
MACF1-234ENST00000641012 SMARCA2P51531 1590 aa15.79■□□□□ 0.12
MACF1-234ENST00000641012 PLPPR3Q6T4P5 718 aa15.77■□□□□ 0.11
MACF1-234ENST00000641012 KIF27Q86VH2 1401 aa15.77■□□□□ 0.11
MACF1-234ENST00000641012 PELP1Q8IZL8 1130 aaKnown RBP15.76■□□□□ 0.11
MACF1-234ENST00000641012 KCNH8Q96L42 1107 aa15.76■□□□□ 0.11
MACF1-234ENST00000641012 ESF1Q9H501 851 aaKnown RBP15.76■□□□□ 0.11
MACF1-234ENST00000641012 YTHDC1Q96MU7 727 aaKnown RBP15.75■□□□□ 0.11
MACF1-234ENST00000641012 PDS5BQ9NTI5 1447 aa15.74■□□□□ 0.11
MACF1-234ENST00000641012 CCDC88BA6NC98 1476 aa15.74■□□□□ 0.11
MACF1-234ENST00000641012 BCANQ96GW7 911 aa15.71■□□□□ 0.11
MACF1-234ENST00000641012 HRCP23327 699 aa15.71■□□□□ 0.11
MACF1-234ENST00000641012 CENPBP07199 599 aaPredicted RBP15.7■□□□□ 0.1
MACF1-234ENST00000641012 ATAD2BQ9ULI0 1458 aa15.69■□□□□ 0.1
MACF1-234ENST00000641012 MTUS2Q5JR59 1369 aa15.69■□□□□ 0.1
MACF1-234ENST00000641012 CHIC2Q9UKJ5 165 aa15.68■□□□□ 0.1
MACF1-234ENST00000641012 CLIP1P30622 1438 aa15.68■□□□□ 0.1
MACF1-234ENST00000641012 CADPSQ9ULU8 1353 aa15.67■□□□□ 0.1
MACF1-234ENST00000641012 EEA1Q15075 1411 aa15.66■□□□□ 0.1
MACF1-234ENST00000641012 PLEKHD1A6NEE1 506 aa15.66■□□□□ 0.1
MACF1-234ENST00000641012 CUX2O14529 1486 aa15.65■□□□□ 0.1
MACF1-234ENST00000641012 TDRD9Q8NDG6 1382 aaKnown RBP15.65■□□□□ 0.1
MACF1-234ENST00000641012 TSPY4P0CV99 314 aa15.64■□□□□ 0.09
MACF1-234ENST00000641012 TSPY10P0CW01 314 aa15.64■□□□□ 0.09
MACF1-234ENST00000641012 WIZO95785 1651 aa15.62■□□□□ 0.09
MACF1-234ENST00000641012 CHGAP10645 457 aaKnown RBP15.62■□□□□ 0.09
MACF1-234ENST00000641012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.61■□□□□ 0.09
MACF1-234ENST00000641012 CARMIL1Q5VZK9 1371 aa15.59■□□□□ 0.09
MACF1-234ENST00000641012 GOLGA3Q08378 1498 aa15.58■□□□□ 0.09
MACF1-234ENST00000641012 STAG3Q9UJ98 1225 aa15.58■□□□□ 0.09
MACF1-234ENST00000641012 SOGA1O94964 1423 aa15.58■□□□□ 0.08
MACF1-234ENST00000641012 SMARCA4P51532 1647 aa15.54■□□□□ 0.08
MACF1-234ENST00000641012 TOP2AP11388 1531 aaKnown RBP15.53■□□□□ 0.08
MACF1-234ENST00000641012 ABCC8Q09428 1581 aa15.52■□□□□ 0.07
MACF1-234ENST00000641012 TRHP20396 242 aaPredicted RBP15.52■□□□□ 0.07
MACF1-234ENST00000641012 CEP162Q5TB80 1403 aa15.51■□□□□ 0.07
MACF1-234ENST00000641012 CEP164Q9UPV0 1460 aa15.51■□□□□ 0.07
MACF1-234ENST00000641012 NEFLP07196 543 aa15.51■□□□□ 0.07
MACF1-234ENST00000641012 CFDP1Q9UEE9 299 aaPredicted RBP15.48■□□□□ 0.07
MACF1-234ENST00000641012 EIF4G1Q04637 1599 aaKnown RBP15.47■□□□□ 0.07
MACF1-234ENST00000641012 RRP7BPQ9NSQ0 103 aa15.46■□□□□ 0.07
MACF1-234ENST00000641012 TNIKQ9UKE5 1360 aa15.45■□□□□ 0.06
MACF1-234ENST00000641012 ARID4BQ4LE39 1312 aaPredicted RBP15.43■□□□□ 0.06
MACF1-234ENST00000641012 FANCD2Q9BXW9 1451 aa15.42■□□□□ 0.06
MACF1-234ENST00000641012 NCAPD3P42695 1498 aa15.39■□□□□ 0.05
MACF1-234ENST00000641012 DIEXFQ68CQ4 756 aaKnown RBP15.38■□□□□ 0.05
MACF1-234ENST00000641012 SENP3Q9H4L4 574 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms