RNA–Protein interactions for RNA: ENST00000640771.1

CCDC162P-215, Transcript of coiled-coil domain containing 162, pseudogene, humanhuman

TSL 5

Gene CCDC162P, Length 4,195 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162P-215ENST00000640771 NISCHQ9Y2I1 1504 aa15.52■□□□□ 0.07
CCDC162P-215ENST00000640771 DCAF8L2P0C7V8 631 aa15.01□□□□□ -0.01
CCDC162P-215ENST00000640771 SUPT5HO00267 1087 aaKnown RBP14.22□□□□□ -0.13
CCDC162P-215ENST00000640771 SHROOM4Q9ULL8 1493 aa14.2□□□□□ -0.14
CCDC162P-215ENST00000640771 EHMT2Q96KQ7 1210 aa13.45□□□□□ -0.26
CCDC162P-215ENST00000640771 FAM9AQ8IZU1 332 aaPredicted RBP13.31□□□□□ -0.28
CCDC162P-215ENST00000640771 TRIM41Q8WV44 630 aa13.23□□□□□ -0.29
CCDC162P-215ENST00000640771 ABCC9O60706 1549 aa13.22□□□□□ -0.29
CCDC162P-215ENST00000640771 APLP2Q06481 763 aa13.1□□□□□ -0.31
CCDC162P-215ENST00000640771 PABPN1Q86U42 306 aaKnown RBP eCLIP12.98□□□□□ -0.33
CCDC162P-215ENST00000640771 RANGAP1P46060 587 aaPredicted RBP12.95□□□□□ -0.34
CCDC162P-215ENST00000640771 PCGF6Q9BYE7 350 aa12.95□□□□□ -0.34
CCDC162P-215ENST00000640771 UBTFP17480 764 aaKnown RBP12.94□□□□□ -0.34
CCDC162P-215ENST00000640771 CHIC1Q5VXU3 224 aa12.94□□□□□ -0.34
CCDC162P-215ENST00000640771 TTBK1Q5TCY1 1321 aaPredicted RBP12.93□□□□□ -0.34
CCDC162P-215ENST00000640771 ZCCHC6Q5VYS8 1495 aaKnown RBP12.88□□□□□ -0.35
CCDC162P-215ENST00000640771 CCDC180Q9P1Z9 1646 aa12.86□□□□□ -0.35
CCDC162P-215ENST00000640771 LOC105371045A0A1W2PR82 267 aa12.77□□□□□ -0.37
CCDC162P-215ENST00000640771 ATP1B4Q9UN42 357 aaPredicted RBP12.77□□□□□ -0.37
CCDC162P-215ENST00000640771 PPARGC1BQ86YN6 1023 aaKnown RBP12.66□□□□□ -0.38
CCDC162P-215ENST00000640771 SCRIBQ14160 1630 aa12.64□□□□□ -0.39
CCDC162P-215ENST00000640771 CCER1Q8TC90 406 aaPredicted RBP12.62□□□□□ -0.39
CCDC162P-215ENST00000640771 ZEB1P37275 1124 aaPredicted RBP12.58□□□□□ -0.4
CCDC162P-215ENST00000640771 TRIM26Q12899 539 aaPredicted RBP12.57□□□□□ -0.4
CCDC162P-215ENST00000640771 RB1CC1Q8TDY2 1594 aa12.46□□□□□ -0.41
CCDC162P-215ENST00000640771 NACADO15069 1562 aa12.44□□□□□ -0.42
CCDC162P-215ENST00000640771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.41□□□□□ -0.42
CCDC162P-215ENST00000640771 HNRNPUL2Q1KMD3 747 aaKnown RBP12.41□□□□□ -0.42
CCDC162P-215ENST00000640771 DCAF1Q9Y4B6 1507 aa12.39□□□□□ -0.43
CCDC162P-215ENST00000640771 ITGAEP38570 1179 aa12.39□□□□□ -0.43
CCDC162P-215ENST00000640771 CSRNP3Q8WYN3 585 aa12.37□□□□□ -0.43
CCDC162P-215ENST00000640771 RSF1Q96T23 1441 aaPredicted RBP12.35□□□□□ -0.43
CCDC162P-215ENST00000640771 HRCP23327 699 aa12.31□□□□□ -0.44
CCDC162P-215ENST00000640771 FBLN2P98095 1184 aa12.22□□□□□ -0.45
CCDC162P-215ENST00000640771 CECR2Q9BXF3 1484 aa12.19□□□□□ -0.46
CCDC162P-215ENST00000640771 PELP1Q8IZL8 1130 aaKnown RBP12.19□□□□□ -0.46
CCDC162P-215ENST00000640771 CENPBP07199 599 aaPredicted RBP12.18□□□□□ -0.46
CCDC162P-215ENST00000640771 MYT1LQ9UL68 1186 aa12.18□□□□□ -0.46
CCDC162P-215ENST00000640771 FAM50AQ14320 339 aaKnown RBP12.17□□□□□ -0.46
CCDC162P-215ENST00000640771 P3H3Q8IVL6 736 aa12.15□□□□□ -0.46
CCDC162P-215ENST00000640771 BAZ1AQ9NRL2 1556 aaPredicted RBP12.13□□□□□ -0.47
CCDC162P-215ENST00000640771 BAZ1BQ9UIG0 1483 aaKnown RBP12.11□□□□□ -0.47
CCDC162P-215ENST00000640771 MYO15BQ96JP2 1530 aa12.1□□□□□ -0.47
CCDC162P-215ENST00000640771 YTHDC1Q96MU7 727 aaKnown RBP12.04□□□□□ -0.48
CCDC162P-215ENST00000640771 ARID3CA6NKF2 412 aa12.02□□□□□ -0.48
CCDC162P-215ENST00000640771 MROH2BQ7Z745 1585 aa12.02□□□□□ -0.49
CCDC162P-215ENST00000640771 WRNQ14191 1432 aaPredicted RBP eCLIP12.02□□□□□ -0.49
CCDC162P-215ENST00000640771 TRIM52Q96A61 297 aa12□□□□□ -0.49
CCDC162P-215ENST00000640771 EEA1Q15075 1411 aa11.97□□□□□ -0.49
CCDC162P-215ENST00000640771 POLR3GLQ9BT43 218 aa11.97□□□□□ -0.49
CCDC162P-215ENST00000640771 CDK11AQ9UQ88 783 aaPredicted RBP11.95□□□□□ -0.5
CCDC162P-215ENST00000640771 NEUROD1Q13562 356 aa11.95□□□□□ -0.5
CCDC162P-215ENST00000640771 CLIP1P30622 1438 aa11.91□□□□□ -0.5
CCDC162P-215ENST00000640771 DIEXFQ68CQ4 756 aaKnown RBP11.89□□□□□ -0.51
CCDC162P-215ENST00000640771 CCDC88BA6NC98 1476 aa11.89□□□□□ -0.51
CCDC162P-215ENST00000640771 CHMP7Q8WUX9 453 aaPredicted RBP11.89□□□□□ -0.51
CCDC162P-215ENST00000640771 NEFLP07196 543 aa11.88□□□□□ -0.51
CCDC162P-215ENST00000640771 KIF27Q86VH2 1401 aa11.88□□□□□ -0.51
CCDC162P-215ENST00000640771 ZNF777Q9ULD5 760 aaPredicted RBP11.87□□□□□ -0.51
CCDC162P-215ENST00000640771 GOLGA3Q08378 1498 aa11.86□□□□□ -0.51
CCDC162P-215ENST00000640771 CNGB1Q14028 1251 aaPredicted RBP11.85□□□□□ -0.51
CCDC162P-215ENST00000640771 SMARCA2P51531 1590 aa11.84□□□□□ -0.51
CCDC162P-215ENST00000640771 CEP162Q5TB80 1403 aa11.84□□□□□ -0.51
CCDC162P-215ENST00000640771 TNIKQ9UKE5 1360 aa11.82□□□□□ -0.52
CCDC162P-215ENST00000640771 CEP164Q9UPV0 1460 aa11.8□□□□□ -0.52
CCDC162P-215ENST00000640771 WIZO95785 1651 aa11.8□□□□□ -0.52
CCDC162P-215ENST00000640771 SOGA1O94964 1423 aa11.8□□□□□ -0.52
CCDC162P-215ENST00000640771 ZNF326Q5BKZ1 582 aaKnown RBP11.79□□□□□ -0.52
CCDC162P-215ENST00000640771 MTUS2Q5JR59 1369 aa11.78□□□□□ -0.52
CCDC162P-215ENST00000640771 ATAD2BQ9ULI0 1458 aa11.78□□□□□ -0.52
CCDC162P-215ENST00000640771 TOP2AP11388 1531 aaKnown RBP11.77□□□□□ -0.53
CCDC162P-215ENST00000640771 ZNF316A6NFI3 1004 aaPredicted RBP11.76□□□□□ -0.53
CCDC162P-215ENST00000640771 NPM1P06748 294 aaKnown RBP eCLIP11.75□□□□□ -0.53
CCDC162P-215ENST00000640771 ABCC8Q09428 1581 aa11.74□□□□□ -0.53
CCDC162P-215ENST00000640771 ERCC6Q03468 1493 aa11.73□□□□□ -0.53
CCDC162P-215ENST00000640771 CHIC2Q9UKJ5 165 aa11.73□□□□□ -0.53
CCDC162P-215ENST00000640771 CUX2O14529 1486 aa11.73□□□□□ -0.53
CCDC162P-215ENST00000640771 SMARCA4P51532 1647 aa11.72□□□□□ -0.53
CCDC162P-215ENST00000640771 CARMIL1Q5VZK9 1371 aa11.72□□□□□ -0.53
CCDC162P-215ENST00000640771 SLC4A1APQ9BWU0 796 aaKnown RBP11.71□□□□□ -0.53
CCDC162P-215ENST00000640771 CADPSQ9ULU8 1353 aa11.71□□□□□ -0.53
CCDC162P-215ENST00000640771 PDS5BQ9NTI5 1447 aa11.69□□□□□ -0.54
CCDC162P-215ENST00000640771 TSPY4P0CV99 314 aa11.68□□□□□ -0.54
CCDC162P-215ENST00000640771 TSPY10P0CW01 314 aa11.68□□□□□ -0.54
CCDC162P-215ENST00000640771 PLEKHD1A6NEE1 506 aa11.66□□□□□ -0.54
CCDC162P-215ENST00000640771 ANP32CO43423 234 aa11.65□□□□□ -0.54
CCDC162P-215ENST00000640771 TONSLQ96HA7 1378 aa11.64□□□□□ -0.55
CCDC162P-215ENST00000640771 TDRD9Q8NDG6 1382 aaKnown RBP11.63□□□□□ -0.55
CCDC162P-215ENST00000640771 KCNH8Q96L42 1107 aa11.61□□□□□ -0.55
CCDC162P-215ENST00000640771 RRP7BPQ9NSQ0 103 aa11.6□□□□□ -0.55
CCDC162P-215ENST00000640771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.59□□□□□ -0.552e-6■□□□□ 9.7
CCDC162P-215ENST00000640771 ERICH6Q7L0X2 663 aa11.58□□□□□ -0.56
CCDC162P-215ENST00000640771 FHAD1B1AJZ9 1412 aa11.58□□□□□ -0.56
CCDC162P-215ENST00000640771 CFDP1Q9UEE9 299 aaPredicted RBP11.57□□□□□ -0.56
CCDC162P-215ENST00000640771 NCAPD3P42695 1498 aa11.55□□□□□ -0.56
CCDC162P-215ENST00000640771 VPS8Q8N3P4 1428 aa11.54□□□□□ -0.56
CCDC162P-215ENST00000640771 ESF1Q9H501 851 aaKnown RBP11.54□□□□□ -0.56
CCDC162P-215ENST00000640771 CHGAP10645 457 aaKnown RBP11.53□□□□□ -0.56
CCDC162P-215ENST00000640771 EIF4G1Q04637 1599 aaKnown RBP11.52□□□□□ -0.57
CCDC162P-215ENST00000640771 BCANQ96GW7 911 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms