RNA–Protein interactions for RNA: ENST00000639958.1

PRICKLE1-214, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 5

Gene PRICKLE1, Length 3,803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-214ENST00000639958 NISCHQ9Y2I1 1504 aa19.88■□□□□ 0.77
PRICKLE1-214ENST00000639958 DCAF8L2P0C7V8 631 aa18.38■□□□□ 0.53
PRICKLE1-214ENST00000639958 SHROOM4Q9ULL8 1493 aa18.03■□□□□ 0.48
PRICKLE1-214ENST00000639958 SUPT5HO00267 1087 aaKnown RBP17.81■□□□□ 0.44
PRICKLE1-214ENST00000639958 EHMT2Q96KQ7 1210 aa16.88■□□□□ 0.29
PRICKLE1-214ENST00000639958 FAM9AQ8IZU1 332 aaPredicted RBP16.65■□□□□ 0.26
PRICKLE1-214ENST00000639958 ZCCHC6Q5VYS8 1495 aaKnown RBP16.61■□□□□ 0.25
PRICKLE1-214ENST00000639958 ABCC9O60706 1549 aa16.61■□□□□ 0.25
PRICKLE1-214ENST00000639958 CHIC1Q5VXU3 224 aa16.53■□□□□ 0.24
PRICKLE1-214ENST00000639958 CCDC180Q9P1Z9 1646 aa16.48■□□□□ 0.23
PRICKLE1-214ENST00000639958 PCGF6Q9BYE7 350 aa16.41■□□□□ 0.22
PRICKLE1-214ENST00000639958 LOC105371045A0A1W2PR82 267 aa16.4■□□□□ 0.22
PRICKLE1-214ENST00000639958 TRIM41Q8WV44 630 aa16.4■□□□□ 0.22
PRICKLE1-214ENST00000639958 PABPN1Q86U42 306 aaKnown RBP eCLIP16.23■□□□□ 0.19
PRICKLE1-214ENST00000639958 TTBK1Q5TCY1 1321 aaPredicted RBP16.22■□□□□ 0.19
PRICKLE1-214ENST00000639958 SCRIBQ14160 1630 aa16.19■□□□□ 0.18
PRICKLE1-214ENST00000639958 PPARGC1BQ86YN6 1023 aaKnown RBP16.13■□□□□ 0.17
PRICKLE1-214ENST00000639958 RANGAP1P46060 587 aaPredicted RBP16.06■□□□□ 0.16
PRICKLE1-214ENST00000639958 MYO15BQ96JP2 1530 aa15.97■□□□□ 0.15
PRICKLE1-214ENST00000639958 UBTFP17480 764 aaKnown RBP15.9■□□□□ 0.14
PRICKLE1-214ENST00000639958 RSF1Q96T23 1441 aaPredicted RBP15.85■□□□□ 0.13
PRICKLE1-214ENST00000639958 DCAF1Q9Y4B6 1507 aa15.84■□□□□ 0.13
PRICKLE1-214ENST00000639958 CECR2Q9BXF3 1484 aa15.78■□□□□ 0.12
PRICKLE1-214ENST00000639958 TRIM26Q12899 539 aaPredicted RBP15.77■□□□□ 0.11
PRICKLE1-214ENST00000639958 HRCP23327 699 aa15.76■□□□□ 0.11
PRICKLE1-214ENST00000639958 APLP2Q06481 763 aa15.68■□□□□ 0.1
PRICKLE1-214ENST00000639958 NACADO15069 1562 aa15.66■□□□□ 0.1
PRICKLE1-214ENST00000639958 CCER1Q8TC90 406 aaPredicted RBP15.62■□□□□ 0.09
PRICKLE1-214ENST00000639958 RB1CC1Q8TDY2 1594 aa15.61■□□□□ 0.09
PRICKLE1-214ENST00000639958 MROH2BQ7Z745 1585 aa15.56■□□□□ 0.08
PRICKLE1-214ENST00000639958 ATP1B4Q9UN42 357 aaPredicted RBP15.52■□□□□ 0.07
PRICKLE1-214ENST00000639958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
PRICKLE1-214ENST00000639958 HNRNPUL2Q1KMD3 747 aaKnown RBP15.43■□□□□ 0.06
PRICKLE1-214ENST00000639958 CSRNP3Q8WYN3 585 aa15.43■□□□□ 0.06
PRICKLE1-214ENST00000639958 ZEB1P37275 1124 aaPredicted RBP15.39■□□□□ 0.05
PRICKLE1-214ENST00000639958 WIZO95785 1651 aa15.39■□□□□ 0.05
PRICKLE1-214ENST00000639958 BAZ1AQ9NRL2 1556 aaPredicted RBP15.35■□□□□ 0.05
PRICKLE1-214ENST00000639958 ITGAEP38570 1179 aa15.34■□□□□ 0.05
PRICKLE1-214ENST00000639958 ABCC8Q09428 1581 aa15.25■□□□□ 0.03
PRICKLE1-214ENST00000639958 CCDC88BA6NC98 1476 aa15.25■□□□□ 0.03
PRICKLE1-214ENST00000639958 SOGA1O94964 1423 aa15.2■□□□□ 0.02
PRICKLE1-214ENST00000639958 BAZ1BQ9UIG0 1483 aaKnown RBP15.17■□□□□ 0.02
PRICKLE1-214ENST00000639958 P3H3Q8IVL6 736 aa15.16■□□□□ 0.02
PRICKLE1-214ENST00000639958 WRNQ14191 1432 aaPredicted RBP eCLIP15.15■□□□□ 0.02
PRICKLE1-214ENST00000639958 YTHDC1Q96MU7 727 aaKnown RBP15.09■□□□□ 0.01
PRICKLE1-214ENST00000639958 SMARCA4P51532 1647 aa15.08■□□□□ 0
PRICKLE1-214ENST00000639958 CEP162Q5TB80 1403 aa15.08■□□□□ 0
PRICKLE1-214ENST00000639958 TOP2AP11388 1531 aaKnown RBP15.05■□□□□ -0
PRICKLE1-214ENST00000639958 RUSC2Q8N2Y8 1516 aa15.03■□□□□ -0
PRICKLE1-214ENST00000639958 FAM50AQ14320 339 aaKnown RBP14.98□□□□□ -0.01
PRICKLE1-214ENST00000639958 ATAD2BQ9ULI0 1458 aa14.98□□□□□ -0.01
PRICKLE1-214ENST00000639958 ARID3CA6NKF2 412 aa14.97□□□□□ -0.01
PRICKLE1-214ENST00000639958 CLIP1P30622 1438 aa14.97□□□□□ -0.01
PRICKLE1-214ENST00000639958 DIEXFQ68CQ4 756 aaKnown RBP14.94□□□□□ -0.02
PRICKLE1-214ENST00000639958 TNIKQ9UKE5 1360 aa14.94□□□□□ -0.02
PRICKLE1-214ENST00000639958 SMARCA2P51531 1590 aa14.93□□□□□ -0.02
PRICKLE1-214ENST00000639958 GOLGA3Q08378 1498 aa14.93□□□□□ -0.02
PRICKLE1-214ENST00000639958 EEA1Q15075 1411 aa14.89□□□□□ -0.03
PRICKLE1-214ENST00000639958 FBLN2P98095 1184 aa14.86□□□□□ -0.03
PRICKLE1-214ENST00000639958 CENPBP07199 599 aaPredicted RBP14.85□□□□□ -0.03
PRICKLE1-214ENST00000639958 CEP164Q9UPV0 1460 aa14.83□□□□□ -0.04
PRICKLE1-214ENST00000639958 NEUROD1Q13562 356 aa14.83□□□□□ -0.04
PRICKLE1-214ENST00000639958 BICRAQ9NZM4 1560 aa14.82□□□□□ -0.04
PRICKLE1-214ENST00000639958 KIF27Q86VH2 1401 aa14.78□□□□□ -0.04
PRICKLE1-214ENST00000639958 RAPGEF2Q9Y4G8 1499 aa14.76□□□□□ -0.05
PRICKLE1-214ENST00000639958 UNC13AQ9UPW8 1703 aa14.75□□□□□ -0.05
PRICKLE1-214ENST00000639958 KANK4Q5T7N3 995 aaPredicted RBP14.73□□□□□ -0.05
PRICKLE1-214ENST00000639958 ZNF316A6NFI3 1004 aaPredicted RBP14.73□□□□□ -0.05
PRICKLE1-214ENST00000639958 CUX2O14529 1486 aa14.73□□□□□ -0.05
PRICKLE1-214ENST00000639958 CNGB1Q14028 1251 aaPredicted RBP14.67□□□□□ -0.06
PRICKLE1-214ENST00000639958 EIF4G1Q04637 1599 aaKnown RBP14.67□□□□□ -0.06
PRICKLE1-214ENST00000639958 SYNJ1O43426 1573 aa14.65□□□□□ -0.06
PRICKLE1-214ENST00000639958 CADPSQ9ULU8 1353 aa14.65□□□□□ -0.06
PRICKLE1-214ENST00000639958 TRIM52Q96A61 297 aa14.65□□□□□ -0.06
PRICKLE1-214ENST00000639958 CARMIL1Q5VZK9 1371 aa14.65□□□□□ -0.06
PRICKLE1-214ENST00000639958 VPS8Q8N3P4 1428 aa14.63□□□□□ -0.07
PRICKLE1-214ENST00000639958 TDRD9Q8NDG6 1382 aaKnown RBP14.62□□□□□ -0.07
PRICKLE1-214ENST00000639958 DNAJC5BQ9UF47 199 aa14.62□□□□□ -0.07
PRICKLE1-214ENST00000639958 CHIC2Q9UKJ5 165 aa14.61□□□□□ -0.07
PRICKLE1-214ENST00000639958 NCAPD3P42695 1498 aa14.6□□□□□ -0.07
PRICKLE1-214ENST00000639958 POLR3GLQ9BT43 218 aa14.58□□□□□ -0.08
PRICKLE1-214ENST00000639958 HIRIP3Q9BW71 556 aaPredicted RBP14.57□□□□□ -0.08
PRICKLE1-214ENST00000639958 ZNF777Q9ULD5 760 aaPredicted RBP14.55□□□□□ -0.08
PRICKLE1-214ENST00000639958 GTF3C3Q9Y5Q9 886 aa14.55□□□□□ -0.08
PRICKLE1-214ENST00000639958 MTUS2Q5JR59 1369 aa14.53□□□□□ -0.08
PRICKLE1-214ENST00000639958 MIER1Q8N108 512 aa14.52□□□□□ -0.08
PRICKLE1-214ENST00000639958 FANCD2Q9BXW9 1451 aa14.49□□□□□ -0.09
PRICKLE1-214ENST00000639958 NESP48681 1621 aa14.48□□□□□ -0.09
PRICKLE1-214ENST00000639958 IGF1RP08069 1367 aa14.48□□□□□ -0.09
PRICKLE1-214ENST00000639958 RAD54L2Q9Y4B4 1467 aa14.48□□□□□ -0.09
PRICKLE1-214ENST00000639958 RRP7BPQ9NSQ0 103 aa14.48□□□□□ -0.09
PRICKLE1-214ENST00000639958 ACIN1Q9UKV3 1341 aaKnown RBP14.48□□□□□ -0.09
PRICKLE1-214ENST00000639958 CHMP7Q8WUX9 453 aaPredicted RBP14.47□□□□□ -0.09
PRICKLE1-214ENST00000639958 SIN3AQ96ST3 1273 aa14.47□□□□□ -0.09
PRICKLE1-214ENST00000639958 ZNF326Q5BKZ1 582 aaKnown RBP14.47□□□□□ -0.09
PRICKLE1-214ENST00000639958 MYT1LQ9UL68 1186 aa14.46□□□□□ -0.09
PRICKLE1-214ENST00000639958 CCNB3Q8WWL7 1395 aa14.46□□□□□ -0.1
PRICKLE1-214ENST00000639958 CFTRP13569 1480 aa14.46□□□□□ -0.1
PRICKLE1-214ENST00000639958 FGD5Q6ZNL6 1462 aa14.46□□□□□ -0.1
PRICKLE1-214ENST00000639958 CUX1P39880 1505 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms