RNA–Protein interactions for RNA: ENST00000639691.1

KCNMA1-268, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 1 (best)

Gene KCNMA1, Length 3,145 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-268ENST00000639691 NISCHQ9Y2I1 1504 aa18.95■□□□□ 0.62
KCNMA1-268ENST00000639691 HRCP23327 699 aa17.07■□□□□ 0.32
KCNMA1-268ENST00000639691 PELP1Q8IZL8 1130 aaKnown RBP16.84■□□□□ 0.29
KCNMA1-268ENST00000639691 PPARGC1BQ86YN6 1023 aaKnown RBP16.73■□□□□ 0.27
KCNMA1-268ENST00000639691 PCGF6Q9BYE7 350 aa16.58■□□□□ 0.24
KCNMA1-268ENST00000639691 MYO15BQ96JP2 1530 aa16.4■□□□□ 0.22
KCNMA1-268ENST00000639691 SCAF1Q9H7N4 1312 aaKnown RBP16.34■□□□□ 0.21
KCNMA1-268ENST00000639691 SUPT5HO00267 1087 aaKnown RBP16.3■□□□□ 0.2
KCNMA1-268ENST00000639691 SHROOM4Q9ULL8 1493 aa16.26■□□□□ 0.19
KCNMA1-268ENST00000639691 MYT1Q01538 1121 aa16.25■□□□□ 0.19
KCNMA1-268ENST00000639691 CHIC1Q5VXU3 224 aa16.15■□□□□ 0.18
KCNMA1-268ENST00000639691 ZCCHC6Q5VYS8 1495 aaKnown RBP16.11■□□□□ 0.17
KCNMA1-268ENST00000639691 CCDC180Q9P1Z9 1646 aa16.09■□□□□ 0.17
KCNMA1-268ENST00000639691 DCAF1Q9Y4B6 1507 aa16.07■□□□□ 0.16
KCNMA1-268ENST00000639691 TRIM26Q12899 539 aaPredicted RBP15.95■□□□□ 0.14
KCNMA1-268ENST00000639691 ZEB1P37275 1124 aaPredicted RBP15.89■□□□□ 0.13
KCNMA1-268ENST00000639691 LOC105371045A0A1W2PR82 267 aa15.83■□□□□ 0.12
KCNMA1-268ENST00000639691 ACIN1Q9UKV3 1341 aaKnown RBP15.81■□□□□ 0.12
KCNMA1-268ENST00000639691 NEUROD1Q13562 356 aa15.77■□□□□ 0.12
KCNMA1-268ENST00000639691 GTF3C3Q9Y5Q9 886 aa15.71■□□□□ 0.11
KCNMA1-268ENST00000639691 CENPBP07199 599 aaPredicted RBP15.53■□□□□ 0.08
KCNMA1-268ENST00000639691 DIEXFQ68CQ4 756 aaKnown RBP15.39■□□□□ 0.05
KCNMA1-268ENST00000639691 TTBK1Q5TCY1 1321 aaPredicted RBP15.32■□□□□ 0.04
KCNMA1-268ENST00000639691 ABCC9O60706 1549 aa15.27■□□□□ 0.03
KCNMA1-268ENST00000639691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.27■□□□□ 0.03
KCNMA1-268ENST00000639691 BCL11AQ9H165 835 aa15.24■□□□□ 0.03
KCNMA1-268ENST00000639691 DCAF8L2P0C7V8 631 aa15.22■□□□□ 0.03
KCNMA1-268ENST00000639691 CCER1Q8TC90 406 aaPredicted RBP15.22■□□□□ 0.03
KCNMA1-268ENST00000639691 YTHDC1Q96MU7 727 aaKnown RBP15.17■□□□□ 0.02
KCNMA1-268ENST00000639691 FAM9AQ8IZU1 332 aaPredicted RBP15.14■□□□□ 0.01
KCNMA1-268ENST00000639691 TRIM41Q8WV44 630 aa15.14■□□□□ 0.01
KCNMA1-268ENST00000639691 ANP32EQ9BTT0 268 aa15.06■□□□□ 0
KCNMA1-268ENST00000639691 RSF1Q96T23 1441 aaPredicted RBP15.06■□□□□ 0
KCNMA1-268ENST00000639691 EHMT2Q96KQ7 1210 aa15.03■□□□□ -0
KCNMA1-268ENST00000639691 ZNF316A6NFI3 1004 aaPredicted RBP15.01□□□□□ -0.01
KCNMA1-268ENST00000639691 RB1CC1Q8TDY2 1594 aa15□□□□□ -0.01
KCNMA1-268ENST00000639691 MIER1Q8N108 512 aa14.98□□□□□ -0.01
KCNMA1-268ENST00000639691 SCRIBQ14160 1630 aa14.93□□□□□ -0.02
KCNMA1-268ENST00000639691 CSRNP3Q8WYN3 585 aa14.92□□□□□ -0.02
KCNMA1-268ENST00000639691 TSHZ2Q9NRE2 1034 aa14.9□□□□□ -0.02
KCNMA1-268ENST00000639691 SUPT16HQ9Y5B9 1047 aaKnown RBP14.89□□□□□ -0.03
KCNMA1-268ENST00000639691 PRKCSHP14314 528 aaPredicted RBP14.83□□□□□ -0.04
KCNMA1-268ENST00000639691 CLSPNQ9HAW4 1339 aa14.79□□□□□ -0.04
KCNMA1-268ENST00000639691 NACADO15069 1562 aa14.73□□□□□ -0.05
KCNMA1-268ENST00000639691 EIF4G1Q04637 1599 aaKnown RBP14.73□□□□□ -0.05
KCNMA1-268ENST00000639691 MROH2BQ7Z745 1585 aa14.71□□□□□ -0.05
KCNMA1-268ENST00000639691 CECR2Q9BXF3 1484 aa14.69□□□□□ -0.06
KCNMA1-268ENST00000639691 WIZO95785 1651 aa14.66□□□□□ -0.06
KCNMA1-268ENST00000639691 BAZ1AQ9NRL2 1556 aaPredicted RBP14.65□□□□□ -0.06
KCNMA1-268ENST00000639691 WRNQ14191 1432 aaPredicted RBP eCLIP14.61□□□□□ -0.07
KCNMA1-268ENST00000639691 RBM19Q9Y4C8 960 aaKnown RBP14.52□□□□□ -0.09
KCNMA1-268ENST00000639691 BCANQ96GW7 911 aa14.51□□□□□ -0.09
KCNMA1-268ENST00000639691 CEP162Q5TB80 1403 aa14.48□□□□□ -0.09
KCNMA1-268ENST00000639691 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.09
KCNMA1-268ENST00000639691 HNRNPUL2Q1KMD3 747 aaKnown RBP14.45□□□□□ -0.1
KCNMA1-268ENST00000639691 MSH5O43196 834 aa14.44□□□□□ -0.1
KCNMA1-268ENST00000639691 ERICH6Q7L0X2 663 aa14.44□□□□□ -0.1
KCNMA1-268ENST00000639691 FKBP8Q14318 412 aa14.41□□□□□ -0.1
KCNMA1-268ENST00000639691 SMARCA2P51531 1590 aa14.4□□□□□ -0.1
KCNMA1-268ENST00000639691 SMARCA4P51532 1647 aa14.38□□□□□ -0.11
KCNMA1-268ENST00000639691 CCDC88BA6NC98 1476 aa14.38□□□□□ -0.11
KCNMA1-268ENST00000639691 ABCC8Q09428 1581 aa14.37□□□□□ -0.11
KCNMA1-268ENST00000639691 KCNH8Q96L42 1107 aa14.37□□□□□ -0.11
KCNMA1-268ENST00000639691 TNIKQ9UKE5 1360 aa14.37□□□□□ -0.11
KCNMA1-268ENST00000639691 EEA1Q15075 1411 aa14.34□□□□□ -0.11
KCNMA1-268ENST00000639691 ITGAEP38570 1179 aa14.31□□□□□ -0.12
KCNMA1-268ENST00000639691 UNC13AQ9UPW8 1703 aa14.3□□□□□ -0.12
KCNMA1-268ENST00000639691 APLP2Q06481 763 aa14.3□□□□□ -0.12
KCNMA1-268ENST00000639691 ANO8Q9HCE9 1232 aaPredicted RBP14.28□□□□□ -0.12
KCNMA1-268ENST00000639691 SOGA1O94964 1423 aa14.27□□□□□ -0.12
KCNMA1-268ENST00000639691 FANCIQ9NVI1 1328 aa14.26□□□□□ -0.13
KCNMA1-268ENST00000639691 DEKP35659 375 aaKnown RBP14.24□□□□□ -0.13
KCNMA1-268ENST00000639691 NEFLP07196 543 aa14.23□□□□□ -0.13
KCNMA1-268ENST00000639691 UBTFP17480 764 aaKnown RBP14.22□□□□□ -0.13
KCNMA1-268ENST00000639691 RUSC2Q8N2Y8 1516 aa14.21□□□□□ -0.13
KCNMA1-268ENST00000639691 GOLGA3Q08378 1498 aa14.21□□□□□ -0.13
KCNMA1-268ENST00000639691 DHX57Q6P158 1386 aaKnown RBP14.21□□□□□ -0.14
KCNMA1-268ENST00000639691 MYT1LQ9UL68 1186 aa14.19□□□□□ -0.14
KCNMA1-268ENST00000639691 KIF21BO75037 1637 aa14.19□□□□□ -0.14
KCNMA1-268ENST00000639691 PEG3Q9GZU2 1588 aa14.18□□□□□ -0.14
KCNMA1-268ENST00000639691 SALL2Q9Y467 1007 aaPredicted RBP14.12□□□□□ -0.15
KCNMA1-268ENST00000639691 CEP164Q9UPV0 1460 aa14.1□□□□□ -0.15
KCNMA1-268ENST00000639691 TRIM52Q96A61 297 aa14.09□□□□□ -0.15
KCNMA1-268ENST00000639691 SYNJ1O43426 1573 aa14.08□□□□□ -0.15
KCNMA1-268ENST00000639691 CDK11AQ9UQ88 783 aaPredicted RBP14.08□□□□□ -0.16
KCNMA1-268ENST00000639691 BAZ1BQ9UIG0 1483 aaKnown RBP14.08□□□□□ -0.16
KCNMA1-268ENST00000639691 BICRAQ9NZM4 1560 aa14.06□□□□□ -0.16
KCNMA1-268ENST00000639691 CLIP1P30622 1438 aa14.05□□□□□ -0.16
KCNMA1-268ENST00000639691 VPS8Q8N3P4 1428 aa14.04□□□□□ -0.16
KCNMA1-268ENST00000639691 DDX10Q13206 875 aaKnown RBP14.04□□□□□ -0.16
KCNMA1-268ENST00000639691 ERICH6BQ5W0A0 696 aa14.04□□□□□ -0.16
KCNMA1-268ENST00000639691 CCDC136Q96JN2 1154 aa14.04□□□□□ -0.16
KCNMA1-268ENST00000639691 NBR1Q14596 966 aa14.01□□□□□ -0.17
KCNMA1-268ENST00000639691 IRX6P78412 446 aaPredicted RBP13.98□□□□□ -0.17
KCNMA1-268ENST00000639691 PPP1R15AO75807 674 aaPredicted RBP13.95□□□□□ -0.18
KCNMA1-268ENST00000639691 CCER2I3L3R5 266 aa13.95□□□□□ -0.18
KCNMA1-268ENST00000639691 UBE2Q2Q8WVN8 375 aa13.95□□□□□ -0.18
KCNMA1-268ENST00000639691 NOP58Q9Y2X3 529 aaKnown RBP13.94□□□□□ -0.18
KCNMA1-268ENST00000639691 IL27Q8NEV9 243 aa13.94□□□□□ -0.18
KCNMA1-268ENST00000639691 RAPGEF2Q9Y4G8 1499 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms