RNA–Protein interactions for RNA: ENST00000639657.1

KCNMA1-267, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 4,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-267ENST00000639657 NISCHQ9Y2I1 1504 aa14.02□□□□□ -0.17
KCNMA1-267ENST00000639657 DCAF8L2P0C7V8 631 aa13.24□□□□□ -0.29
KCNMA1-267ENST00000639657 SHROOM4Q9ULL8 1493 aa13.07□□□□□ -0.32
KCNMA1-267ENST00000639657 SUPT5HO00267 1087 aaKnown RBP12.95□□□□□ -0.34
KCNMA1-267ENST00000639657 EHMT2Q96KQ7 1210 aa12.42□□□□□ -0.42
KCNMA1-267ENST00000639657 PCGF6Q9BYE7 350 aa12.38□□□□□ -0.43
KCNMA1-267ENST00000639657 PELP1Q8IZL8 1130 aaKnown RBP12.24□□□□□ -0.45
KCNMA1-267ENST00000639657 MYT1Q01538 1121 aa12.16□□□□□ -0.46
KCNMA1-267ENST00000639657 FAM9AQ8IZU1 332 aaPredicted RBP12.15□□□□□ -0.47
KCNMA1-267ENST00000639657 PPARGC1BQ86YN6 1023 aaKnown RBP12.12□□□□□ -0.47
KCNMA1-267ENST00000639657 HRCP23327 699 aa12.11□□□□□ -0.47
KCNMA1-267ENST00000639657 LOC105371045A0A1W2PR82 267 aa12.06□□□□□ -0.48
KCNMA1-267ENST00000639657 CHIC1Q5VXU3 224 aa12.01□□□□□ -0.49
KCNMA1-267ENST00000639657 TTBK1Q5TCY1 1321 aaPredicted RBP11.91□□□□□ -0.5
KCNMA1-267ENST00000639657 TRIM41Q8WV44 630 aa11.81□□□□□ -0.52
KCNMA1-267ENST00000639657 TRIM26Q12899 539 aaPredicted RBP11.72□□□□□ -0.53
KCNMA1-267ENST00000639657 ABCC9O60706 1549 aa11.71□□□□□ -0.53
KCNMA1-267ENST00000639657 ZCCHC6Q5VYS8 1495 aaKnown RBP11.7□□□□□ -0.54
KCNMA1-267ENST00000639657 RANGAP1P46060 587 aaPredicted RBP11.7□□□□□ -0.54
KCNMA1-267ENST00000639657 ZEB1P37275 1124 aaPredicted RBP11.67□□□□□ -0.54
KCNMA1-267ENST00000639657 MYO15BQ96JP2 1530 aa11.66□□□□□ -0.54
KCNMA1-267ENST00000639657 CCER1Q8TC90 406 aaPredicted RBP11.65□□□□□ -0.54
KCNMA1-267ENST00000639657 PABPN1Q86U42 306 aaKnown RBP eCLIP11.6□□□□□ -0.55
KCNMA1-267ENST00000639657 YTHDC1Q96MU7 727 aaKnown RBP11.6□□□□□ -0.55
KCNMA1-267ENST00000639657 CENPBP07199 599 aaPredicted RBP11.56□□□□□ -0.56
KCNMA1-267ENST00000639657 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.49□□□□□ -0.57
KCNMA1-267ENST00000639657 UBTFP17480 764 aaKnown RBP11.45□□□□□ -0.58
KCNMA1-267ENST00000639657 SCRIBQ14160 1630 aa11.44□□□□□ -0.58
KCNMA1-267ENST00000639657 SCAF1Q9H7N4 1312 aaKnown RBP11.39□□□□□ -0.59
KCNMA1-267ENST00000639657 GTF3C3Q9Y5Q9 886 aa11.39□□□□□ -0.59
KCNMA1-267ENST00000639657 CCDC180Q9P1Z9 1646 aa11.37□□□□□ -0.59
KCNMA1-267ENST00000639657 DIEXFQ68CQ4 756 aaKnown RBP11.35□□□□□ -0.59
KCNMA1-267ENST00000639657 RSF1Q96T23 1441 aaPredicted RBP11.31□□□□□ -0.6
KCNMA1-267ENST00000639657 APLP2Q06481 763 aa11.3□□□□□ -0.6
KCNMA1-267ENST00000639657 ACIN1Q9UKV3 1341 aaKnown RBP11.28□□□□□ -0.6
KCNMA1-267ENST00000639657 CECR2Q9BXF3 1484 aa11.27□□□□□ -0.6
KCNMA1-267ENST00000639657 NEUROD1Q13562 356 aa11.26□□□□□ -0.61
KCNMA1-267ENST00000639657 HNRNPUL2Q1KMD3 747 aaKnown RBP11.24□□□□□ -0.61
KCNMA1-267ENST00000639657 DCAF1Q9Y4B6 1507 aa11.24□□□□□ -0.61
KCNMA1-267ENST00000639657 ATP1B4Q9UN42 357 aaPredicted RBP11.2□□□□□ -0.62
KCNMA1-267ENST00000639657 ITGAEP38570 1179 aa11.16□□□□□ -0.62
KCNMA1-267ENST00000639657 ERICH6Q7L0X2 663 aa11.16□□□□□ -0.62
KCNMA1-267ENST00000639657 RB1CC1Q8TDY2 1594 aa11.08□□□□□ -0.64
KCNMA1-267ENST00000639657 MROH2BQ7Z745 1585 aa11.06□□□□□ -0.64
KCNMA1-267ENST00000639657 CSRNP3Q8WYN3 585 aa11.06□□□□□ -0.64
KCNMA1-267ENST00000639657 ZNF316A6NFI3 1004 aaPredicted RBP11.05□□□□□ -0.64
KCNMA1-267ENST00000639657 BCANQ96GW7 911 aa11.02□□□□□ -0.64
KCNMA1-267ENST00000639657 P3H3Q8IVL6 736 aa10.97□□□□□ -0.65
KCNMA1-267ENST00000639657 NEFLP07196 543 aa10.97□□□□□ -0.65
KCNMA1-267ENST00000639657 SOGA1O94964 1423 aa10.95□□□□□ -0.66
KCNMA1-267ENST00000639657 MIER1Q8N108 512 aa10.94□□□□□ -0.66
KCNMA1-267ENST00000639657 WIZO95785 1651 aa10.93□□□□□ -0.66
KCNMA1-267ENST00000639657 ABCC8Q09428 1581 aa10.92□□□□□ -0.66
KCNMA1-267ENST00000639657 CCDC88BA6NC98 1476 aa10.9□□□□□ -0.66
KCNMA1-267ENST00000639657 NACADO15069 1562 aa10.86□□□□□ -0.67
KCNMA1-267ENST00000639657 RUSC2Q8N2Y8 1516 aa10.86□□□□□ -0.67
KCNMA1-267ENST00000639657 ARID3CA6NKF2 412 aa10.85□□□□□ -0.67
KCNMA1-267ENST00000639657 CNGB1Q14028 1251 aaPredicted RBP10.81□□□□□ -0.68
KCNMA1-267ENST00000639657 CEP162Q5TB80 1403 aa10.81□□□□□ -0.68
KCNMA1-267ENST00000639657 FAM50AQ14320 339 aaKnown RBP10.8□□□□□ -0.68
KCNMA1-267ENST00000639657 WRNQ14191 1432 aaPredicted RBP eCLIP10.75□□□□□ -0.69
KCNMA1-267ENST00000639657 BAZ1AQ9NRL2 1556 aaPredicted RBP10.74□□□□□ -0.69
KCNMA1-267ENST00000639657 FKBP8Q14318 412 aa10.74□□□□□ -0.69
KCNMA1-267ENST00000639657 HIRIP3Q9BW71 556 aaPredicted RBP10.74□□□□□ -0.69
KCNMA1-267ENST00000639657 BCL11AQ9H165 835 aa10.72□□□□□ -0.69
KCNMA1-267ENST00000639657 KANK4Q5T7N3 995 aaPredicted RBP10.7□□□□□ -0.7
KCNMA1-267ENST00000639657 CLIP1P30622 1438 aa10.7□□□□□ -0.7
KCNMA1-267ENST00000639657 DDX10Q13206 875 aaKnown RBP10.67□□□□□ -0.7
KCNMA1-267ENST00000639657 POLR3GLQ9BT43 218 aa10.67□□□□□ -0.7
KCNMA1-267ENST00000639657 TRIM52Q96A61 297 aa10.67□□□□□ -0.7
KCNMA1-267ENST00000639657 TNIKQ9UKE5 1360 aa10.66□□□□□ -0.7
KCNMA1-267ENST00000639657 BAZ1BQ9UIG0 1483 aaKnown RBP10.65□□□□□ -0.7
KCNMA1-267ENST00000639657 SUPT16HQ9Y5B9 1047 aaKnown RBP10.64□□□□□ -0.71
KCNMA1-267ENST00000639657 ANP32CO43423 234 aa10.61□□□□□ -0.71
KCNMA1-267ENST00000639657 FBLN2P98095 1184 aa10.61□□□□□ -0.71
KCNMA1-267ENST00000639657 IRX6P78412 446 aaPredicted RBP10.6□□□□□ -0.71
KCNMA1-267ENST00000639657 ANP32EQ9BTT0 268 aa10.6□□□□□ -0.71
KCNMA1-267ENST00000639657 GOLGA3Q08378 1498 aa10.59□□□□□ -0.71
KCNMA1-267ENST00000639657 CHIC2Q9UKJ5 165 aa10.58□□□□□ -0.72
KCNMA1-267ENST00000639657 SMARCA4P51532 1647 aa10.58□□□□□ -0.72
KCNMA1-267ENST00000639657 CDK11AQ9UQ88 783 aaPredicted RBP10.57□□□□□ -0.72
KCNMA1-267ENST00000639657 RAPGEF2Q9Y4G8 1499 aa10.57□□□□□ -0.72
KCNMA1-267ENST00000639657 SIN3AQ96ST3 1273 aa10.57□□□□□ -0.72
KCNMA1-267ENST00000639657 TOP2AP11388 1531 aaKnown RBP10.57□□□□□ -0.72
KCNMA1-267ENST00000639657 SMARCA2P51531 1590 aa10.54□□□□□ -0.72
KCNMA1-267ENST00000639657 ATAD2BQ9ULI0 1458 aa10.54□□□□□ -0.72
KCNMA1-267ENST00000639657 DNAJC5BQ9UF47 199 aa10.54□□□□□ -0.72
KCNMA1-267ENST00000639657 CLSPNQ9HAW4 1339 aa10.53□□□□□ -0.72
KCNMA1-267ENST00000639657 EIF5BO60841 1220 aaKnown RBP10.53□□□□□ -0.72
KCNMA1-267ENST00000639657 SENP3-EIF4A1A0A087X0R7 540 aa10.52□□□□□ -0.73
KCNMA1-267ENST00000639657 HNRNPUQ00839 825 aaKnown RBP eCLIP10.52□□□□□ -0.73
KCNMA1-267ENST00000639657 TSHZ2Q9NRE2 1034 aa10.51□□□□□ -0.73
KCNMA1-267ENST00000639657 PRKCSHP14314 528 aaPredicted RBP10.51□□□□□ -0.73
KCNMA1-267ENST00000639657 CEP164Q9UPV0 1460 aa10.5□□□□□ -0.73
KCNMA1-267ENST00000639657 KCNH8Q96L42 1107 aa10.49□□□□□ -0.73
KCNMA1-267ENST00000639657 RTL5Q5HYW3 569 aaPredicted RBP10.48□□□□□ -0.73
KCNMA1-267ENST00000639657 ZNF326Q5BKZ1 582 aaKnown RBP10.48□□□□□ -0.73
KCNMA1-267ENST00000639657 EEA1Q15075 1411 aa10.48□□□□□ -0.73
KCNMA1-267ENST00000639657 NBR1Q14596 966 aa10.47□□□□□ -0.73
KCNMA1-267ENST00000639657 RRP7BPQ9NSQ0 103 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms