RNA–Protein interactions for RNA: ENST00000639106.1

EPM2A-216, Transcript of EPM2A, laforin glucan phosphatase, humanhuman

Gene EPM2A, Length 5,533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPM2A-216ENST00000639106 DCAF8L2P0C7V8 631 aa18.66■□□□□ 0.58
EPM2A-216ENST00000639106 SUPT5HO00267 1087 aaKnown RBP17.45■□□□□ 0.38
EPM2A-216ENST00000639106 NISCHQ9Y2I1 1504 aa17.34■□□□□ 0.37
EPM2A-216ENST00000639106 SHROOM4Q9ULL8 1493 aa17.15■□□□□ 0.34
EPM2A-216ENST00000639106 EHMT2Q96KQ7 1210 aa17.01■□□□□ 0.31
EPM2A-216ENST00000639106 APLP2Q06481 763 aa16.73■□□□□ 0.27
EPM2A-216ENST00000639106 FAM9AQ8IZU1 332 aaPredicted RBP16.64■□□□□ 0.25
EPM2A-216ENST00000639106 PELP1Q8IZL8 1130 aaKnown RBP16.42■□□□□ 0.22
EPM2A-216ENST00000639106 TTBK1Q5TCY1 1321 aaPredicted RBP16.4■□□□□ 0.22
EPM2A-216ENST00000639106 RANGAP1P46060 587 aaPredicted RBP16.34■□□□□ 0.21
EPM2A-216ENST00000639106 ATP1B4Q9UN42 357 aaPredicted RBP16.26■□□□□ 0.19
EPM2A-216ENST00000639106 TRIM41Q8WV44 630 aa16.16■□□□□ 0.18
EPM2A-216ENST00000639106 PCGF6Q9BYE7 350 aa16.12■□□□□ 0.17
EPM2A-216ENST00000639106 UBTFP17480 764 aaKnown RBP16.06■□□□□ 0.16
EPM2A-216ENST00000639106 CCER1Q8TC90 406 aaPredicted RBP15.94■□□□□ 0.14
EPM2A-216ENST00000639106 ZEB1P37275 1124 aaPredicted RBP15.83■□□□□ 0.12
EPM2A-216ENST00000639106 CENPBP07199 599 aaPredicted RBP15.78■□□□□ 0.12
EPM2A-216ENST00000639106 ERICH6Q7L0X2 663 aa15.77■□□□□ 0.11
EPM2A-216ENST00000639106 MYT1LQ9UL68 1186 aa15.76■□□□□ 0.11
EPM2A-216ENST00000639106 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.72■□□□□ 0.11
EPM2A-216ENST00000639106 HNRNPUL2Q1KMD3 747 aaKnown RBP15.72■□□□□ 0.11
EPM2A-216ENST00000639106 PPARGC1BQ86YN6 1023 aaKnown RBP15.67■□□□□ 0.1
EPM2A-216ENST00000639106 NEFLP07196 543 aa15.6■□□□□ 0.09
EPM2A-216ENST00000639106 ITGAEP38570 1179 aa15.57■□□□□ 0.08
EPM2A-216ENST00000639106 YTHDC1Q96MU7 727 aaKnown RBP15.54■□□□□ 0.08
EPM2A-216ENST00000639106 POLR3GLQ9BT43 218 aa15.5■□□□□ 0.07
EPM2A-216ENST00000639106 CHIC1Q5VXU3 224 aa15.45■□□□□ 0.06
EPM2A-216ENST00000639106 TRIM26Q12899 539 aaPredicted RBP15.39■□□□□ 0.05
EPM2A-216ENST00000639106 PABPN1Q86U42 306 aaKnown RBP eCLIP15.33■□□□□ 0.04
EPM2A-216ENST00000639106 CNGB1Q14028 1251 aaPredicted RBP15.31■□□□□ 0.04
EPM2A-216ENST00000639106 SLC4A1APQ9BWU0 796 aaKnown RBP15.31■□□□□ 0.04
EPM2A-216ENST00000639106 ABCC9O60706 1549 aa15.3■□□□□ 0.04
EPM2A-216ENST00000639106 LOC105371045A0A1W2PR82 267 aa15.29■□□□□ 0.04
EPM2A-216ENST00000639106 DAXXQ9UER7 740 aaPredicted RBP15.21■□□□□ 0.03
EPM2A-216ENST00000639106 FAM50AQ14320 339 aaKnown RBP15.17■□□□□ 0.02
EPM2A-216ENST00000639106 FBLN2P98095 1184 aa15.13■□□□□ 0.01
EPM2A-216ENST00000639106 TRIM52Q96A61 297 aa15.12■□□□□ 0.01
EPM2A-216ENST00000639106 HRCP23327 699 aa15.11■□□□□ 0.01
EPM2A-216ENST00000639106 NEUROD1Q13562 356 aa14.97□□□□□ -0.01
EPM2A-216ENST00000639106 CLSPNQ9HAW4 1339 aa14.96□□□□□ -0.01
EPM2A-216ENST00000639106 ZNF326Q5BKZ1 582 aaKnown RBP14.94□□□□□ -0.02
EPM2A-216ENST00000639106 BCANQ96GW7 911 aa14.9□□□□□ -0.02
EPM2A-216ENST00000639106 ARID3CA6NKF2 412 aa14.87□□□□□ -0.03
EPM2A-216ENST00000639106 P3H3Q8IVL6 736 aa14.85□□□□□ -0.03
EPM2A-216ENST00000639106 ZNF316A6NFI3 1004 aaPredicted RBP14.84□□□□□ -0.03
EPM2A-216ENST00000639106 DIEXFQ68CQ4 756 aaKnown RBP14.83□□□□□ -0.03
EPM2A-216ENST00000639106 SLC24A1O60721 1099 aa14.81□□□□□ -0.04
EPM2A-216ENST00000639106 MYT1Q01538 1121 aa14.79□□□□□ -0.04
EPM2A-216ENST00000639106 ZNF777Q9ULD5 760 aaPredicted RBP14.78□□□□□ -0.04
EPM2A-216ENST00000639106 ZBTB47Q9UFB7 747 aaPredicted RBP14.76□□□□□ -0.05
EPM2A-216ENST00000639106 ANP32CO43423 234 aa14.74□□□□□ -0.05
EPM2A-216ENST00000639106 ESF1Q9H501 851 aaKnown RBP14.74□□□□□ -0.05
EPM2A-216ENST00000639106 NEFMP07197 916 aa14.72□□□□□ -0.05
EPM2A-216ENST00000639106 CDK11AQ9UQ88 783 aaPredicted RBP14.71□□□□□ -0.05
EPM2A-216ENST00000639106 RTL5Q5HYW3 569 aaPredicted RBP14.7□□□□□ -0.06
EPM2A-216ENST00000639106 CSRNP3Q8WYN3 585 aa14.68□□□□□ -0.06
EPM2A-216ENST00000639106 CANXP27824 592 aaKnown RBP14.67□□□□□ -0.06
EPM2A-216ENST00000639106 BCL11AQ9H165 835 aa14.66□□□□□ -0.06
EPM2A-216ENST00000639106 NPM1P06748 294 aaKnown RBP eCLIP14.66□□□□□ -0.06
EPM2A-216ENST00000639106 PLPPR3Q6T4P5 718 aa14.65□□□□□ -0.06
EPM2A-216ENST00000639106 STAG3Q9UJ98 1225 aa14.63□□□□□ -0.07
EPM2A-216ENST00000639106 CHGAP10645 457 aaKnown RBP14.61□□□□□ -0.07
EPM2A-216ENST00000639106 SCRIBQ14160 1630 aa14.6□□□□□ -0.07
EPM2A-216ENST00000639106 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.45□□□□□ -0.1
EPM2A-216ENST00000639106 TONSLQ96HA7 1378 aa14.42□□□□□ -0.1
EPM2A-216ENST00000639106 CHMP7Q8WUX9 453 aaPredicted RBP14.42□□□□□ -0.1
EPM2A-216ENST00000639106 CHIC2Q9UKJ5 165 aa14.4□□□□□ -0.1
EPM2A-216ENST00000639106 GTF3C3Q9Y5Q9 886 aa14.4□□□□□ -0.1
EPM2A-216ENST00000639106 TSPY4P0CV99 314 aa14.37□□□□□ -0.11
EPM2A-216ENST00000639106 TSPY10P0CW01 314 aa14.37□□□□□ -0.11
EPM2A-216ENST00000639106 SCAF1Q9H7N4 1312 aaKnown RBP14.33□□□□□ -0.11
EPM2A-216ENST00000639106 KDM2AQ9Y2K7 1162 aa14.29□□□□□ -0.12
EPM2A-216ENST00000639106 MTUS2Q5JR59 1369 aa14.29□□□□□ -0.12
EPM2A-216ENST00000639106 ZCCHC6Q5VYS8 1495 aaKnown RBP14.27□□□□□ -0.12
EPM2A-216ENST00000639106 SALL2Q9Y467 1007 aaPredicted RBP14.27□□□□□ -0.13
EPM2A-216ENST00000639106 ANP32AP39687 249 aaKnown RBP14.27□□□□□ -0.13
EPM2A-216ENST00000639106 FAM9BQ8IZU0 186 aa14.27□□□□□ -0.13
EPM2A-216ENST00000639106 KCNH8Q96L42 1107 aa14.27□□□□□ -0.13
EPM2A-216ENST00000639106 NPM2Q86SE8 214 aaKnown RBP14.26□□□□□ -0.13
EPM2A-216ENST00000639106 A0A0G2JS52 829 aa14.25□□□□□ -0.13
EPM2A-216ENST00000639106 DDX10Q13206 875 aaKnown RBP14.24□□□□□ -0.13
EPM2A-216ENST00000639106 HNRNPUQ00839 825 aaKnown RBP eCLIP14.23□□□□□ -0.13
EPM2A-216ENST00000639106 SENP3Q9H4L4 574 aaPredicted RBP14.23□□□□□ -0.13
EPM2A-216ENST00000639106 PPP1R15AO75807 674 aaPredicted RBP14.22□□□□□ -0.13
EPM2A-216ENST00000639106 HSP90AA1P07900 732 aaKnown RBP14.22□□□□□ -0.13
EPM2A-216ENST00000639106 TMC1Q8TDI8 760 aa14.22□□□□□ -0.13
EPM2A-216ENST00000639106 WDR43Q15061 677 aaKnown RBP eCLIP14.22□□□□□ -0.13
EPM2A-216ENST00000639106 ZBTB7CA1YPR0 619 aa14.21□□□□□ -0.13
EPM2A-216ENST00000639106 PLEKHG5O94827 1062 aa14.2□□□□□ -0.14
EPM2A-216ENST00000639106 C14orf37Q86TY3 774 aa14.19□□□□□ -0.14
EPM2A-216ENST00000639106 PLEKHD1A6NEE1 506 aa14.19□□□□□ -0.14
EPM2A-216ENST00000639106 UPF2Q9HAU5 1272 aaKnown RBP14.18□□□□□ -0.14
EPM2A-216ENST00000639106 RB1CC1Q8TDY2 1594 aa14.18□□□□□ -0.14
EPM2A-216ENST00000639106 ARID4BQ4LE39 1312 aaPredicted RBP14.17□□□□□ -0.14
EPM2A-216ENST00000639106 FKBP8Q14318 412 aa14.16□□□□□ -0.14
EPM2A-216ENST00000639106 RRP7BPQ9NSQ0 103 aa14.15□□□□□ -0.14
EPM2A-216ENST00000639106 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.15□□□□□ -0.14
EPM2A-216ENST00000639106 ACIN1Q9UKV3 1341 aaKnown RBP14.13□□□□□ -0.15
EPM2A-216ENST00000639106 CLIP1P30622 1438 aa14.12□□□□□ -0.15
EPM2A-216ENST00000639106 CCDC180Q9P1Z9 1646 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms