RNA–Protein interactions for RNA: ENST00000638436.1

PRICKLE2-206, Transcript of prickle planar cell polarity protein 2, humanhuman

Gene PRICKLE2, Length 4,446 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE2-206ENST00000638436 NISCHQ9Y2I1 1504 aa15.49■□□□□ 0.07
PRICKLE2-206ENST00000638436 SUPT5HO00267 1087 aaKnown RBP14.79□□□□□ -0.04
PRICKLE2-206ENST00000638436 SHROOM4Q9ULL8 1493 aa14.62□□□□□ -0.07
PRICKLE2-206ENST00000638436 PCGF6Q9BYE7 350 aa14.59□□□□□ -0.07
PRICKLE2-206ENST00000638436 HRCP23327 699 aa14.52□□□□□ -0.09
PRICKLE2-206ENST00000638436 PELP1Q8IZL8 1130 aaKnown RBP14.39□□□□□ -0.11
PRICKLE2-206ENST00000638436 DCAF8L2P0C7V8 631 aa14.36□□□□□ -0.11
PRICKLE2-206ENST00000638436 PPARGC1BQ86YN6 1023 aaKnown RBP14.31□□□□□ -0.12
PRICKLE2-206ENST00000638436 CHIC1Q5VXU3 224 aa14□□□□□ -0.17
PRICKLE2-206ENST00000638436 ZEB1P37275 1124 aaPredicted RBP13.99□□□□□ -0.17
PRICKLE2-206ENST00000638436 EHMT2Q96KQ7 1210 aa13.97□□□□□ -0.17
PRICKLE2-206ENST00000638436 MYT1Q01538 1121 aa13.94□□□□□ -0.18
PRICKLE2-206ENST00000638436 TRIM26Q12899 539 aaPredicted RBP13.92□□□□□ -0.18
PRICKLE2-206ENST00000638436 LOC105371045A0A1W2PR82 267 aa13.89□□□□□ -0.19
PRICKLE2-206ENST00000638436 CENPBP07199 599 aaPredicted RBP13.83□□□□□ -0.19
PRICKLE2-206ENST00000638436 FAM9AQ8IZU1 332 aaPredicted RBP13.81□□□□□ -0.2
PRICKLE2-206ENST00000638436 CCER1Q8TC90 406 aaPredicted RBP13.7□□□□□ -0.22
PRICKLE2-206ENST00000638436 SCAF1Q9H7N4 1312 aaKnown RBP13.67□□□□□ -0.22
PRICKLE2-206ENST00000638436 TTBK1Q5TCY1 1321 aaPredicted RBP13.61□□□□□ -0.23
PRICKLE2-206ENST00000638436 MYO15BQ96JP2 1530 aa13.61□□□□□ -0.23
PRICKLE2-206ENST00000638436 YTHDC1Q96MU7 727 aaKnown RBP13.61□□□□□ -0.23
PRICKLE2-206ENST00000638436 TRIM41Q8WV44 630 aa13.59□□□□□ -0.23
PRICKLE2-206ENST00000638436 GTF3C3Q9Y5Q9 886 aa13.58□□□□□ -0.24
PRICKLE2-206ENST00000638436 ACIN1Q9UKV3 1341 aaKnown RBP13.53□□□□□ -0.24
PRICKLE2-206ENST00000638436 DCAF1Q9Y4B6 1507 aa13.49□□□□□ -0.25
PRICKLE2-206ENST00000638436 DIEXFQ68CQ4 756 aaKnown RBP13.47□□□□□ -0.25
PRICKLE2-206ENST00000638436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.47□□□□□ -0.25
PRICKLE2-206ENST00000638436 NEUROD1Q13562 356 aa13.43□□□□□ -0.26
PRICKLE2-206ENST00000638436 CCDC180Q9P1Z9 1646 aa13.18□□□□□ -0.3
PRICKLE2-206ENST00000638436 APLP2Q06481 763 aa13.17□□□□□ -0.3
PRICKLE2-206ENST00000638436 ZNF316A6NFI3 1004 aaPredicted RBP13.12□□□□□ -0.31
PRICKLE2-206ENST00000638436 UBTFP17480 764 aaKnown RBP13.11□□□□□ -0.31
PRICKLE2-206ENST00000638436 HNRNPUL2Q1KMD3 747 aaKnown RBP13.08□□□□□ -0.32
PRICKLE2-206ENST00000638436 ERICH6Q7L0X2 663 aa13.08□□□□□ -0.32
PRICKLE2-206ENST00000638436 ZCCHC6Q5VYS8 1495 aaKnown RBP13.06□□□□□ -0.32
PRICKLE2-206ENST00000638436 RANGAP1P46060 587 aaPredicted RBP13.04□□□□□ -0.32
PRICKLE2-206ENST00000638436 NEFLP07196 543 aa13.02□□□□□ -0.33
PRICKLE2-206ENST00000638436 MIER1Q8N108 512 aa12.96□□□□□ -0.34
PRICKLE2-206ENST00000638436 BCANQ96GW7 911 aa12.96□□□□□ -0.34
PRICKLE2-206ENST00000638436 ABCC9O60706 1549 aa12.91□□□□□ -0.34
PRICKLE2-206ENST00000638436 ANP32EQ9BTT0 268 aa12.81□□□□□ -0.36
PRICKLE2-206ENST00000638436 BCL11AQ9H165 835 aa12.79□□□□□ -0.36
PRICKLE2-206ENST00000638436 CLSPNQ9HAW4 1339 aa12.78□□□□□ -0.36
PRICKLE2-206ENST00000638436 ITGAEP38570 1179 aa12.75□□□□□ -0.37
PRICKLE2-206ENST00000638436 SUPT16HQ9Y5B9 1047 aaKnown RBP12.72□□□□□ -0.37
PRICKLE2-206ENST00000638436 FKBP8Q14318 412 aa12.72□□□□□ -0.37
PRICKLE2-206ENST00000638436 CSRNP3Q8WYN3 585 aa12.62□□□□□ -0.39
PRICKLE2-206ENST00000638436 RSF1Q96T23 1441 aaPredicted RBP12.61□□□□□ -0.39
PRICKLE2-206ENST00000638436 TSHZ2Q9NRE2 1034 aa12.61□□□□□ -0.39
PRICKLE2-206ENST00000638436 CDK11AQ9UQ88 783 aaPredicted RBP12.59□□□□□ -0.39
PRICKLE2-206ENST00000638436 ATP1B4Q9UN42 357 aaPredicted RBP12.56□□□□□ -0.4
PRICKLE2-206ENST00000638436 CEP162Q5TB80 1403 aa12.54□□□□□ -0.4
PRICKLE2-206ENST00000638436 SCRIBQ14160 1630 aa12.53□□□□□ -0.4
PRICKLE2-206ENST00000638436 RTL5Q5HYW3 569 aaPredicted RBP12.52□□□□□ -0.4
PRICKLE2-206ENST00000638436 TRIM52Q96A61 297 aa12.52□□□□□ -0.4
PRICKLE2-206ENST00000638436 ANP32CO43423 234 aa12.52□□□□□ -0.41
PRICKLE2-206ENST00000638436 DDX10Q13206 875 aaKnown RBP12.52□□□□□ -0.41
PRICKLE2-206ENST00000638436 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
PRICKLE2-206ENST00000638436 RBM19Q9Y4C8 960 aaKnown RBP12.46□□□□□ -0.41
PRICKLE2-206ENST00000638436 RB1CC1Q8TDY2 1594 aa12.43□□□□□ -0.42
PRICKLE2-206ENST00000638436 IRX6P78412 446 aaPredicted RBP12.42□□□□□ -0.42
PRICKLE2-206ENST00000638436 CNGB1Q14028 1251 aaPredicted RBP12.41□□□□□ -0.42
PRICKLE2-206ENST00000638436 NBR1Q14596 966 aa12.4□□□□□ -0.42
PRICKLE2-206ENST00000638436 NACADO15069 1562 aa12.4□□□□□ -0.42
PRICKLE2-206ENST00000638436 TNIKQ9UKE5 1360 aa12.4□□□□□ -0.42
PRICKLE2-206ENST00000638436 FAM50AQ14320 339 aaKnown RBP12.39□□□□□ -0.43
PRICKLE2-206ENST00000638436 MYT1LQ9UL68 1186 aa12.38□□□□□ -0.43
PRICKLE2-206ENST00000638436 HNRNPUQ00839 825 aaKnown RBP eCLIP12.38□□□□□ -0.43
PRICKLE2-206ENST00000638436 HIRIP3Q9BW71 556 aaPredicted RBP12.37□□□□□ -0.43
PRICKLE2-206ENST00000638436 CLIP1P30622 1438 aa12.34□□□□□ -0.43
PRICKLE2-206ENST00000638436 KCNH8Q96L42 1107 aa12.33□□□□□ -0.44
PRICKLE2-206ENST00000638436 POLR3GLQ9BT43 218 aa12.31□□□□□ -0.44
PRICKLE2-206ENST00000638436 ANP32AP39687 249 aaKnown RBP12.3□□□□□ -0.44
PRICKLE2-206ENST00000638436 SOGA1O94964 1423 aa12.29□□□□□ -0.44
PRICKLE2-206ENST00000638436 WRNQ14191 1432 aaPredicted RBP eCLIP12.29□□□□□ -0.44
PRICKLE2-206ENST00000638436 GOLGA3Q08378 1498 aa12.29□□□□□ -0.44
PRICKLE2-206ENST00000638436 DEKP35659 375 aaKnown RBP12.28□□□□□ -0.44
PRICKLE2-206ENST00000638436 DAXXQ9UER7 740 aaPredicted RBP12.27□□□□□ -0.44
PRICKLE2-206ENST00000638436 EEA1Q15075 1411 aa12.25□□□□□ -0.45
PRICKLE2-206ENST00000638436 CECR2Q9BXF3 1484 aa12.24□□□□□ -0.45
PRICKLE2-206ENST00000638436 NPM2Q86SE8 214 aaKnown RBP12.24□□□□□ -0.45
PRICKLE2-206ENST00000638436 EIF5BO60841 1220 aaKnown RBP12.23□□□□□ -0.45
PRICKLE2-206ENST00000638436 CCDC88BA6NC98 1476 aa12.22□□□□□ -0.45
PRICKLE2-206ENST00000638436 FAM9BQ8IZU0 186 aa12.21□□□□□ -0.45
PRICKLE2-206ENST00000638436 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.46
PRICKLE2-206ENST00000638436 RTN4Q9NQC3 1192 aaKnown RBP12.19□□□□□ -0.46
PRICKLE2-206ENST00000638436 SIN3AQ96ST3 1273 aa12.18□□□□□ -0.46
PRICKLE2-206ENST00000638436 ABCC8Q09428 1581 aa12.17□□□□□ -0.46
PRICKLE2-206ENST00000638436 TONSLQ96HA7 1378 aa12.17□□□□□ -0.46
PRICKLE2-206ENST00000638436 NOP58Q9Y2X3 529 aaKnown RBP12.16□□□□□ -0.46
PRICKLE2-206ENST00000638436 B4GALNT3Q6L9W6 998 aa12.15□□□□□ -0.46
PRICKLE2-206ENST00000638436 CCDC136Q96JN2 1154 aa12.15□□□□□ -0.46
PRICKLE2-206ENST00000638436 DHX57Q6P158 1386 aaKnown RBP12.15□□□□□ -0.47
PRICKLE2-206ENST00000638436 PPP4R2Q9NY27 417 aa12.14□□□□□ -0.47
PRICKLE2-206ENST00000638436 MROH2BQ7Z745 1585 aa12.14□□□□□ -0.47
PRICKLE2-206ENST00000638436 VPS8Q8N3P4 1428 aa12.13□□□□□ -0.47
PRICKLE2-206ENST00000638436 CEP164Q9UPV0 1460 aa12.13□□□□□ -0.47
PRICKLE2-206ENST00000638436 CCER2I3L3R5 266 aa12.12□□□□□ -0.47
PRICKLE2-206ENST00000638436 MRS2Q9HD23 443 aa12.11□□□□□ -0.47
PRICKLE2-206ENST00000638436 P3H3Q8IVL6 736 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms