RNA–Protein interactions for RNA: ENST00000638083.1

CACNB4-272, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

Gene CACNB4, Length 6,849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-272ENST00000638083 DCAF8L2P0C7V8 631 aa13.92□□□□□ -0.18
CACNB4-272ENST00000638083 NISCHQ9Y2I1 1504 aa13.35□□□□□ -0.27
CACNB4-272ENST00000638083 SUPT5HO00267 1087 aaKnown RBP12.79□□□□□ -0.36
CACNB4-272ENST00000638083 EHMT2Q96KQ7 1210 aa12.78□□□□□ -0.36
CACNB4-272ENST00000638083 SHROOM4Q9ULL8 1493 aa12.71□□□□□ -0.37
CACNB4-272ENST00000638083 PELP1Q8IZL8 1130 aaKnown RBP12.46□□□□□ -0.41
CACNB4-272ENST00000638083 FAM9AQ8IZU1 332 aaPredicted RBP12.45□□□□□ -0.42
CACNB4-272ENST00000638083 TTBK1Q5TCY1 1321 aaPredicted RBP12.34□□□□□ -0.43
CACNB4-272ENST00000638083 APLP2Q06481 763 aa12.18□□□□□ -0.46
CACNB4-272ENST00000638083 ERICH6Q7L0X2 663 aa12.16□□□□□ -0.46
CACNB4-272ENST00000638083 PCGF6Q9BYE7 350 aa12.16□□□□□ -0.46
CACNB4-272ENST00000638083 RANGAP1P46060 587 aaPredicted RBP12.08□□□□□ -0.48
CACNB4-272ENST00000638083 ATP1B4Q9UN42 357 aaPredicted RBP12.03□□□□□ -0.48
CACNB4-272ENST00000638083 ABCC9O60706 1549 aa12□□□□□ -0.49
CACNB4-272ENST00000638083 CENPBP07199 599 aaPredicted RBP11.96□□□□□ -0.49
CACNB4-272ENST00000638083 YTHDC1Q96MU7 727 aaKnown RBP11.96□□□□□ -0.5
CACNB4-272ENST00000638083 CCER1Q8TC90 406 aaPredicted RBP11.92□□□□□ -0.5
CACNB4-272ENST00000638083 MYT1Q01538 1121 aa11.85□□□□□ -0.51
CACNB4-272ENST00000638083 ZEB1P37275 1124 aaPredicted RBP11.83□□□□□ -0.52
CACNB4-272ENST00000638083 MYT1LQ9UL68 1186 aa11.82□□□□□ -0.52
CACNB4-272ENST00000638083 PABPN1Q86U42 306 aaKnown RBP eCLIP11.8□□□□□ -0.52
CACNB4-272ENST00000638083 TRIM41Q8WV44 630 aa11.8□□□□□ -0.52
CACNB4-272ENST00000638083 PPARGC1BQ86YN6 1023 aaKnown RBP11.78□□□□□ -0.52
CACNB4-272ENST00000638083 NEFLP07196 543 aa11.76□□□□□ -0.53
CACNB4-272ENST00000638083 UBTFP17480 764 aaKnown RBP11.73□□□□□ -0.53
CACNB4-272ENST00000638083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.7□□□□□ -0.54
CACNB4-272ENST00000638083 HNRNPUL2Q1KMD3 747 aaKnown RBP11.7□□□□□ -0.54
CACNB4-272ENST00000638083 HRCP23327 699 aa11.66□□□□□ -0.54
CACNB4-272ENST00000638083 CHIC1Q5VXU3 224 aa11.63□□□□□ -0.55
CACNB4-272ENST00000638083 CNGB1Q14028 1251 aaPredicted RBP11.61□□□□□ -0.55
CACNB4-272ENST00000638083 TRIM26Q12899 539 aaPredicted RBP11.6□□□□□ -0.55
CACNB4-272ENST00000638083 POLR3GLQ9BT43 218 aa11.58□□□□□ -0.55
CACNB4-272ENST00000638083 DAXXQ9UER7 740 aaPredicted RBP11.54□□□□□ -0.56
CACNB4-272ENST00000638083 ITGAEP38570 1179 aa11.52□□□□□ -0.57
CACNB4-272ENST00000638083 FBLN2P98095 1184 aa11.48□□□□□ -0.57
CACNB4-272ENST00000638083 LOC105371045A0A1W2PR82 267 aa11.48□□□□□ -0.57
CACNB4-272ENST00000638083 SCRIBQ14160 1630 aa11.42□□□□□ -0.58
CACNB4-272ENST00000638083 CCDC180Q9P1Z9 1646 aa11.38□□□□□ -0.59
CACNB4-272ENST00000638083 SLC4A1APQ9BWU0 796 aaKnown RBP11.34□□□□□ -0.59
CACNB4-272ENST00000638083 RB1CC1Q8TDY2 1594 aa11.3□□□□□ -0.6
CACNB4-272ENST00000638083 CLSPNQ9HAW4 1339 aa11.28□□□□□ -0.6
CACNB4-272ENST00000638083 ZNF316A6NFI3 1004 aaPredicted RBP11.28□□□□□ -0.6
CACNB4-272ENST00000638083 RTL5Q5HYW3 569 aaPredicted RBP11.26□□□□□ -0.61
CACNB4-272ENST00000638083 BCANQ96GW7 911 aa11.25□□□□□ -0.61
CACNB4-272ENST00000638083 DIEXFQ68CQ4 756 aaKnown RBP11.19□□□□□ -0.62
CACNB4-272ENST00000638083 BCL11AQ9H165 835 aa11.17□□□□□ -0.62
CACNB4-272ENST00000638083 PLPPR3Q6T4P5 718 aa11.15□□□□□ -0.62
CACNB4-272ENST00000638083 NPM1P06748 294 aaKnown RBP eCLIP11.14□□□□□ -0.63
CACNB4-272ENST00000638083 FAM50AQ14320 339 aaKnown RBP11.14□□□□□ -0.63
CACNB4-272ENST00000638083 ESF1Q9H501 851 aaKnown RBP11.12□□□□□ -0.63
CACNB4-272ENST00000638083 NEUROD1Q13562 356 aa11.1□□□□□ -0.63
CACNB4-272ENST00000638083 GTF3C3Q9Y5Q9 886 aa11.1□□□□□ -0.63
CACNB4-272ENST00000638083 ARID3CA6NKF2 412 aa11.1□□□□□ -0.63
CACNB4-272ENST00000638083 TRIM52Q96A61 297 aa11.09□□□□□ -0.63
CACNB4-272ENST00000638083 ERCC6Q03468 1493 aa11.09□□□□□ -0.63
CACNB4-272ENST00000638083 NACADO15069 1562 aa11.03□□□□□ -0.64
CACNB4-272ENST00000638083 P3H3Q8IVL6 736 aa11.03□□□□□ -0.64
CACNB4-272ENST00000638083 ZCCHC6Q5VYS8 1495 aaKnown RBP11.02□□□□□ -0.64
CACNB4-272ENST00000638083 ZNF326Q5BKZ1 582 aaKnown RBP11.02□□□□□ -0.65
CACNB4-272ENST00000638083 SLC24A1O60721 1099 aa11.01□□□□□ -0.65
CACNB4-272ENST00000638083 ZNF777Q9ULD5 760 aaPredicted RBP10.99□□□□□ -0.65
CACNB4-272ENST00000638083 CDK11AQ9UQ88 783 aaPredicted RBP10.99□□□□□ -0.65
CACNB4-272ENST00000638083 DCAF1Q9Y4B6 1507 aa10.98□□□□□ -0.65
CACNB4-272ENST00000638083 CHMP7Q8WUX9 453 aaPredicted RBP10.97□□□□□ -0.65
CACNB4-272ENST00000638083 STAG3Q9UJ98 1225 aa10.96□□□□□ -0.66
CACNB4-272ENST00000638083 ZBTB47Q9UFB7 747 aaPredicted RBP10.93□□□□□ -0.66
CACNB4-272ENST00000638083 NPM2Q86SE8 214 aaKnown RBP10.93□□□□□ -0.66
CACNB4-272ENST00000638083 ANP32CO43423 234 aa10.92□□□□□ -0.66
CACNB4-272ENST00000638083 EIF5BO60841 1220 aaKnown RBP10.91□□□□□ -0.66
CACNB4-272ENST00000638083 CSRNP3Q8WYN3 585 aa10.91□□□□□ -0.66
CACNB4-272ENST00000638083 CANXP27824 592 aaKnown RBP10.91□□□□□ -0.66
CACNB4-272ENST00000638083 ACIN1Q9UKV3 1341 aaKnown RBP10.9□□□□□ -0.66
CACNB4-272ENST00000638083 BAZ1BQ9UIG0 1483 aaKnown RBP10.87□□□□□ -0.67
CACNB4-272ENST00000638083 TRHP20396 242 aaPredicted RBP10.84□□□□□ -0.67
CACNB4-272ENST00000638083 CHGAP10645 457 aaKnown RBP10.84□□□□□ -0.67
CACNB4-272ENST00000638083 ANP32AP39687 249 aaKnown RBP10.81□□□□□ -0.68
CACNB4-272ENST00000638083 ARID4BQ4LE39 1312 aaPredicted RBP10.8□□□□□ -0.68
CACNB4-272ENST00000638083 ARXQ96QS3 562 aa10.78□□□□□ -0.68
CACNB4-272ENST00000638083 MYO15BQ96JP2 1530 aa10.77□□□□□ -0.68
CACNB4-272ENST00000638083 SCAF1Q9H7N4 1312 aaKnown RBP10.77□□□□□ -0.69
CACNB4-272ENST00000638083 FKBP8Q14318 412 aa10.75□□□□□ -0.69
CACNB4-272ENST00000638083 SALL2Q9Y467 1007 aaPredicted RBP10.75□□□□□ -0.69
CACNB4-272ENST00000638083 NBR1Q14596 966 aa10.74□□□□□ -0.69
CACNB4-272ENST00000638083 KCNH8Q96L42 1107 aa10.74□□□□□ -0.69
CACNB4-272ENST00000638083 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.73□□□□□ -0.695e-10■■■■■ 31.7
CACNB4-272ENST00000638083 NEFMP07197 916 aa10.72□□□□□ -0.69
CACNB4-272ENST00000638083 HSP90AA1P07900 732 aaKnown RBP10.72□□□□□ -0.69
CACNB4-272ENST00000638083 ANP32BQ92688 251 aaKnown RBP10.68□□□□□ -0.7
CACNB4-272ENST00000638083 RSF1Q96T23 1441 aaPredicted RBP10.67□□□□□ -0.7
CACNB4-272ENST00000638083 FAM9BQ8IZU0 186 aa10.67□□□□□ -0.7
CACNB4-272ENST00000638083 EIF4G1Q04637 1599 aaKnown RBP10.66□□□□□ -0.7
CACNB4-272ENST00000638083 C14orf37Q86TY3 774 aa10.66□□□□□ -0.7
CACNB4-272ENST00000638083 HNRNPUQ00839 825 aaKnown RBP eCLIP10.64□□□□□ -0.71
CACNB4-272ENST00000638083 PPP1R15AO75807 674 aaPredicted RBP10.64□□□□□ -0.71
CACNB4-272ENST00000638083 ZBTB7CA1YPR0 619 aa10.63□□□□□ -0.71
CACNB4-272ENST00000638083 A0A0G2JS52 829 aa10.63□□□□□ -0.71
CACNB4-272ENST00000638083 IRX6P78412 446 aaPredicted RBP10.62□□□□□ -0.71
CACNB4-272ENST00000638083 SENP3Q9H4L4 574 aaPredicted RBP10.62□□□□□ -0.71
CACNB4-272ENST00000638083 BAZ1AQ9NRL2 1556 aaPredicted RBP10.61□□□□□ -0.71
CACNB4-272ENST00000638083 DDX10Q13206 875 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms