RNA–Protein interactions for RNA: ENST00000637820.1

SPTAN1-236, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 100 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-236ENST00000637820 POTEDQ86YR6 584 aa0.42□□□□□ -2.34
SPTAN1-236ENST00000637820 XP32Q5T750 250 aa0.37□□□□□ -2.35
SPTAN1-236ENST00000637820 PLSCR2Q9NRY7 297 aa0.3□□□□□ -2.36
SPTAN1-236ENST00000637820 POTEHQ6S545 545 aa0.28□□□□□ -2.36
SPTAN1-236ENST00000637820 KRTAP9-8Q9BYQ0 159 aa0.28□□□□□ -2.36
SPTAN1-236ENST00000637820 KRTAP17-1Q9BYP8 105 aa0.27□□□□□ -2.37
SPTAN1-236ENST00000637820 RGS19P49795 217 aa0.26□□□□□ -2.37
SPTAN1-236ENST00000637820 KRTAP5-3Q6L8H2 238 aa0.25□□□□□ -2.37
SPTAN1-236ENST00000637820 KRTAP4-5Q9BYR2 181 aa0.25□□□□□ -2.37
SPTAN1-236ENST00000637820 LOC100996750A0A140TA64 210 aa0.24□□□□□ -2.37
SPTAN1-236ENST00000637820 KRTAP4-6Q9BYQ5 205 aa0.24□□□□□ -2.37
SPTAN1-236ENST00000637820 PCDH10Q9P2E7 1040 aa0.23□□□□□ -2.37
SPTAN1-236ENST00000637820 LSRQ86X29 649 aaPredicted RBP0.21□□□□□ -2.38
SPTAN1-236ENST00000637820 KRTAP5-9P26371 169 aa0.19□□□□□ -2.38
SPTAN1-236ENST00000637820 KRTAP4-7Q9BYR0 210 aa0.19□□□□□ -2.38
SPTAN1-236ENST00000637820 KRTAP4-8A0A0G2JLE6 195 aa0.18□□□□□ -2.38
SPTAN1-236ENST00000637820 BTBD11A6QL63 1104 aa0.18□□□□□ -2.38
SPTAN1-236ENST00000637820 RBAK-RBAKDNI3L0D1 243 aa0.18□□□□□ -2.38
SPTAN1-236ENST00000637820 IGSF5Q9NSI5 407 aa0.18□□□□□ -2.38
SPTAN1-236ENST00000637820 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.17□□□□□ -2.38
SPTAN1-236ENST00000637820 KRTAP1-3Q8IUG1 177 aa0.17□□□□□ -2.38
SPTAN1-236ENST00000637820 KRTAP4-2Q9BYR5 136 aa0.17□□□□□ -2.38
SPTAN1-236ENST00000637820 KRTAP5-8O75690 187 aa0.16□□□□□ -2.38
SPTAN1-236ENST00000637820 KRTAP5-4Q6L8H1 288 aa0.16□□□□□ -2.38
SPTAN1-236ENST00000637820 KRTAP5-5Q701N2 237 aaPredicted RBP0.16□□□□□ -2.38
SPTAN1-236ENST00000637820 KRTAP4-8Q9BYQ9 185 aa0.16□□□□□ -2.38
SPTAN1-236ENST00000637820 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.15□□□□□ -2.39
SPTAN1-236ENST00000637820 KRTAP5-2Q701N4 177 aa0.15□□□□□ -2.39
SPTAN1-236ENST00000637820 SP7Q8TDD2 431 aaPredicted RBP0.15□□□□□ -2.39
SPTAN1-236ENST00000637820 KRTAP9-9Q9BYP9 154 aa0.15□□□□□ -2.39
SPTAN1-236ENST00000637820 KRTAP9-3Q9BYQ3 159 aa0.15□□□□□ -2.39
SPTAN1-236ENST00000637820 KRTAP4-9Q9BYQ8 210 aa0.15□□□□□ -2.39
SPTAN1-236ENST00000637820 KRTAP4-3Q9BYR4 195 aa0.15□□□□□ -2.39
SPTAN1-236ENST00000637820 KRTAP9-6A0A140TA67 174 aa0.14□□□□□ -2.39
SPTAN1-236ENST00000637820 LCE1DQ5T752 114 aa0.14□□□□□ -2.39
SPTAN1-236ENST00000637820 LCE3BQ5TA77 95 aa0.14□□□□□ -2.39
SPTAN1-236ENST00000637820 KRTAP9-2Q9BYQ4 174 aa0.14□□□□□ -2.39
SPTAN1-236ENST00000637820 KRTAP4-4Q9BYR3 166 aa0.14□□□□□ -2.39
SPTAN1-236ENST00000637820 KRTAP5-1Q6L8H4 278 aa0.13□□□□□ -2.39
SPTAN1-236ENST00000637820 ILDR2Q71H61 639 aa0.13□□□□□ -2.39
SPTAN1-236ENST00000637820 KRTAP9-4Q9BYQ2 154 aa0.13□□□□□ -2.39
SPTAN1-236ENST00000637820 POTEMA6NI47 508 aa0.12□□□□□ -2.39
SPTAN1-236ENST00000637820 KRTAP9-7A8MTY7 169 aa0.12□□□□□ -2.39
SPTAN1-236ENST00000637820 KRTAP4-12Q9BQ66 201 aa0.12□□□□□ -2.39
SPTAN1-236ENST00000637820 KRTAP4-11Q9BYQ6 195 aa0.12□□□□□ -2.39
SPTAN1-236ENST00000637820 WDR26Q9H7D7 661 aa0.12□□□□□ -2.39
SPTAN1-236ENST00000637820 ANO8Q9HCE9 1232 aaPredicted RBP0.12□□□□□ -2.39
SPTAN1-236ENST00000637820 KRTAP1-1Q07627 177 aa0.11□□□□□ -2.39
SPTAN1-236ENST00000637820 LHX8Q68G74 356 aa0.11□□□□□ -2.39
SPTAN1-236ENST00000637820 CACNB1Q02641 598 aaPredicted RBP0.1□□□□□ -2.39
SPTAN1-236ENST00000637820 POTEGQ6S5H5 508 aa0.1□□□□□ -2.39
SPTAN1-236ENST00000637820 DNAJC5GQ8N7S2 189 aa0.1□□□□□ -2.39
SPTAN1-236ENST00000637820 PSMG3-AS1Q96PY0 264 aa0.1□□□□□ -2.39
SPTAN1-236ENST00000637820 SUZ12Q15022 739 aaKnown RBP0.09□□□□□ -2.4
SPTAN1-236ENST00000637820 SERINC4A6NH21 518 aa0.08□□□□□ -2.4
SPTAN1-236ENST00000637820 LAMC2Q13753 1193 aa0.08□□□□□ -2.4
SPTAN1-236ENST00000637820 KRTAP5-11Q6L8G4 156 aa0.07□□□□□ -2.4
SPTAN1-236ENST00000637820 HMCN1Q96RW7 5635 aa0.07□□□□□ -2.4
SPTAN1-236ENST00000637820 POTEB3A0JP26 581 aa0.06□□□□□ -2.4
SPTAN1-236ENST00000637820 MMRN1Q13201 1228 aa0.06□□□□□ -2.4
SPTAN1-236ENST00000637820 KRTAP5-10Q6L8G5 202 aa0.06□□□□□ -2.4
SPTAN1-236ENST00000637820 KRTAP5-7Q6L8G8 165 aa0.06□□□□□ -2.4
SPTAN1-236ENST00000637820 POTEBQ6S5H4 581 aa0.06□□□□□ -2.4
SPTAN1-236ENST00000637820 KRTAP9-6A8MVA2 160 aa0.05□□□□□ -2.4
SPTAN1-236ENST00000637820 KRTAP4-16G5E9R7 235 aaPredicted RBP0.05□□□□□ -2.4
SPTAN1-236ENST00000637820 GSC2O15499 205 aa0.05□□□□□ -2.4
SPTAN1-236ENST00000637820 ONECUT2O95948 504 aa0.05□□□□□ -2.4
SPTAN1-236ENST00000637820 CDAN1Q8IWY9 1227 aa0.05□□□□□ -2.4
SPTAN1-236ENST00000637820 KRTAP10-9P60411 292 aa0.04□□□□□ -2.4
SPTAN1-236ENST00000637820 COL9A3Q14050 684 aaPredicted RBP0.04□□□□□ -2.4
SPTAN1-236ENST00000637820 KRTAP19-1Q8IUB9 90 aa0.04□□□□□ -2.4
SPTAN1-236ENST00000637820 KCTD12Q96CX2 325 aaKnown RBP0.04□□□□□ -2.4
SPTAN1-236ENST00000637820 GOLGA2P5Q9HBQ8 144 aa0.04□□□□□ -2.4
SPTAN1-236ENST00000637820 STK17AQ9UEE5 414 aa0.04□□□□□ -2.4
SPTAN1-236ENST00000637820 PSPNO60542 156 aa0.03□□□□□ -2.4
SPTAN1-236ENST00000637820 RGS20O76081 388 aa0.03□□□□□ -2.4
SPTAN1-236ENST00000637820 FOXD1Q16676 465 aa0.03□□□□□ -2.4
SPTAN1-236ENST00000637820 LCE5AQ5TCM9 118 aa0.03□□□□□ -2.4
SPTAN1-236ENST00000637820 SPNS2Q8IVW8 549 aa0.03□□□□□ -2.4
SPTAN1-236ENST00000637820 MUC16Q8WXI7 14507 aa0.02□□□□□ -2.41
SPTAN1-236ENST00000637820 COBLO75128 1261 aa0.02□□□□□ -2.41
SPTAN1-236ENST00000637820 KRTAP10-7P60409 375 aaPredicted RBP0.02□□□□□ -2.41
SPTAN1-236ENST00000637820 LCE1EQ5T753 118 aa0.02□□□□□ -2.41
SPTAN1-236ENST00000637820 AVENQ9NQS1 362 aaPredicted RBP0.02□□□□□ -2.41
SPTAN1-236ENST00000637820 MSH5O43196 834 aa0.01□□□□□ -2.41
SPTAN1-236ENST00000637820 IGHA2P01877 340 aa0.01□□□□□ -2.41
SPTAN1-236ENST00000637820 YBX3P16989 372 aaKnown RBP eCLIP0.01□□□□□ -2.41
SPTAN1-236ENST00000637820 CCER1Q8TC90 406 aaPredicted RBP0.01□□□□□ -2.41
SPTAN1-236ENST00000637820 NTN5Q8WTR8 489 aaPredicted RBP0.01□□□□□ -2.41
SPTAN1-236ENST00000637820 KCNK12Q9HB15 430 aa0.01□□□□□ -2.41
SPTAN1-236ENST00000637820 IGHA1P01876 353 aa0□□□□□ -2.41
SPTAN1-236ENST00000637820 LORP23490 312 aaPredicted RBP0□□□□□ -2.41
SPTAN1-236ENST00000637820 INSM1Q01101 510 aaPredicted RBP0□□□□□ -2.41
SPTAN1-236ENST00000637820 KRTAP21-2Q3LI59 83 aa0□□□□□ -2.41
SPTAN1-236ENST00000637820 MUC5BQ9HC84 5762 aaPredicted RBP-0.01□□□□□ -2.41
SPTAN1-236ENST00000637820 FAM181BA6NEQ2 426 aa-0.01□□□□□ -2.41
SPTAN1-236ENST00000637820 TXKP42681 527 aa-0.01□□□□□ -2.41
SPTAN1-236ENST00000637820 HNRNPA0Q13151 305 aaKnown RBP-0.01□□□□□ -2.41
SPTAN1-236ENST00000637820 LCE1CQ5T751 118 aa-0.01□□□□□ -2.41
SPTAN1-236ENST00000637820 LCE1BQ5T7P3 118 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms