RNA–Protein interactions for RNA: ENST00000637665.1

LINC01876-208, Transcript of long intergenic non-protein coding RNA 1876, humanhuman

TSL 3

Gene LINC01876, Length 565 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01876-208ENST00000637665 AEBP2Q6ZN18 517 aaPredicted RBP25.67■■□□□ 1.7
LINC01876-208ENST00000637665 CHIC1Q5VXU3 224 aa25.13■■□□□ 1.61
LINC01876-208ENST00000637665 PHF23Q9BUL5 403 aaPredicted RBP22.28■■□□□ 1.16
LINC01876-208ENST00000637665 SENP3Q9H4L4 574 aaPredicted RBP21.49■■□□□ 1.03
LINC01876-208ENST00000637665 PLPPR3Q6T4P5 718 aa20.4■□□□□ 0.86
LINC01876-208ENST00000637665 FOXD1Q16676 465 aa20.09■□□□□ 0.81
LINC01876-208ENST00000637665 PPP6R1Q9UPN7 881 aa19.6■□□□□ 0.73
LINC01876-208ENST00000637665 ADRA2BP18089 450 aa19.54■□□□□ 0.72
LINC01876-208ENST00000637665 PIAS4Q8N2W9 510 aaPredicted RBP18.89■□□□□ 0.61
LINC01876-208ENST00000637665 NISCHQ9Y2I1 1504 aa18.28■□□□□ 0.52
LINC01876-208ENST00000637665 MSH5O43196 834 aa18.23■□□□□ 0.51
LINC01876-208ENST00000637665 PPP4R3CPQ6ZMV5 832 aa18.1■□□□□ 0.49
LINC01876-208ENST00000637665 KCNA4P22459 653 aa18■□□□□ 0.47
LINC01876-208ENST00000637665 MAPK8IP2Q13387 824 aaPredicted RBP17.71■□□□□ 0.43
LINC01876-208ENST00000637665 SCAF1Q9H7N4 1312 aaKnown RBP17.58■□□□□ 0.4
LINC01876-208ENST00000637665 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
LINC01876-208ENST00000637665 NPM3O75607 178 aaKnown RBP17.47■□□□□ 0.39
LINC01876-208ENST00000637665 CNKSR2Q8WXI2 1034 aa17.47■□□□□ 0.39
LINC01876-208ENST00000637665 DMRT2Q9Y5R5 561 aa17.26■□□□□ 0.35
LINC01876-208ENST00000637665 RNF216Q9NWF9 866 aaPredicted RBP17.08■□□□□ 0.32
LINC01876-208ENST00000637665 SLC4A1APQ9BWU0 796 aaKnown RBP17.07■□□□□ 0.32
LINC01876-208ENST00000637665 HOXD11P31277 338 aaPredicted RBP17.01■□□□□ 0.31
LINC01876-208ENST00000637665 EHMT2Q96KQ7 1210 aa16.89■□□□□ 0.29
LINC01876-208ENST00000637665 DNAJC5BQ9UF47 199 aa16.85■□□□□ 0.29
LINC01876-208ENST00000637665 CSRNP3Q8WYN3 585 aa16.68■□□□□ 0.26
LINC01876-208ENST00000637665 ZBTB22O15209 634 aa16.66■□□□□ 0.26
LINC01876-208ENST00000637665 SLC4A2P04920 1241 aa16.51■□□□□ 0.23
LINC01876-208ENST00000637665 DCAF8L1A6NGE4 600 aa16.44■□□□□ 0.22
LINC01876-208ENST00000637665 POTEDQ86YR6 584 aa16.39■□□□□ 0.21
LINC01876-208ENST00000637665 FOXD4L1Q9NU39 408 aa16.37■□□□□ 0.21
LINC01876-208ENST00000637665 CCDC180Q9P1Z9 1646 aa16.3■□□□□ 0.2
LINC01876-208ENST00000637665 ABCC9O60706 1549 aa16.29■□□□□ 0.2
LINC01876-208ENST00000637665 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.11■□□□□ 0.17
LINC01876-208ENST00000637665 U3KPZ7 1027 aaPredicted RBP16.02■□□□□ 0.16
LINC01876-208ENST00000637665 MYCNP04198 464 aaPredicted RBP16.01■□□□□ 0.15
LINC01876-208ENST00000637665 ATF5Q9Y2D1 282 aaPredicted RBP15.81■□□□□ 0.12
LINC01876-208ENST00000637665 RNF39Q9H2S5 420 aa15.77■□□□□ 0.12
LINC01876-208ENST00000637665 ATXN8OSP0DMR3 200 aa15.74■□□□□ 0.11
LINC01876-208ENST00000637665 SAMD1Q6SPF0 538 aaPredicted RBP15.64■□□□□ 0.09
LINC01876-208ENST00000637665 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.62■□□□□ 0.09
LINC01876-208ENST00000637665 HNRNPUL2Q1KMD3 747 aaKnown RBP15.62■□□□□ 0.09
LINC01876-208ENST00000637665 DCAF8L2P0C7V8 631 aa15.57■□□□□ 0.08
LINC01876-208ENST00000637665 SPINK5Q9NQ38 1064 aaPredicted RBP15.54■□□□□ 0.08
LINC01876-208ENST00000637665 RB1CC1Q8TDY2 1594 aa15.49■□□□□ 0.07
LINC01876-208ENST00000637665 C1QBPQ07021 282 aaKnown RBP15.49■□□□□ 0.07
LINC01876-208ENST00000637665 NACADO15069 1562 aa15.41■□□□□ 0.06
LINC01876-208ENST00000637665 ZNF219Q9P2Y4 722 aaPredicted RBP15.36■□□□□ 0.05
LINC01876-208ENST00000637665 APLP2Q06481 763 aa15.34■□□□□ 0.05
LINC01876-208ENST00000637665 TRHP20396 242 aaPredicted RBP15.33■□□□□ 0.04
LINC01876-208ENST00000637665 CAPN15O75808 1086 aa15.32■□□□□ 0.04
LINC01876-208ENST00000637665 PABPN1Q86U42 306 aaKnown RBP eCLIP15.24■□□□□ 0.03
LINC01876-208ENST00000637665 MYO15BQ96JP2 1530 aa15.17■□□□□ 0.02
LINC01876-208ENST00000637665 ZCCHC6Q5VYS8 1495 aaKnown RBP15.17■□□□□ 0.02
LINC01876-208ENST00000637665 POLA2Q14181 598 aa15.16■□□□□ 0.02
LINC01876-208ENST00000637665 ABCB7O75027 752 aa15.14■□□□□ 0.01
LINC01876-208ENST00000637665 CACNB1Q02641 598 aaPredicted RBP15.13■□□□□ 0.01
LINC01876-208ENST00000637665 UNC13AQ9UPW8 1703 aa15.12■□□□□ 0.01
LINC01876-208ENST00000637665 DSG3P32926 999 aa15.1■□□□□ 0.01
LINC01876-208ENST00000637665 MKRN4PQ13434 485 aaPredicted RBP15.09■□□□□ 0.01
LINC01876-208ENST00000637665 DCAF1Q9Y4B6 1507 aa15.04■□□□□ -0
LINC01876-208ENST00000637665 BICRAQ9NZM4 1560 aa15.02□□□□□ -0.01
LINC01876-208ENST00000637665 FKBP8Q14318 412 aa14.96□□□□□ -0.01
LINC01876-208ENST00000637665 SCRIBQ14160 1630 aa14.95□□□□□ -0.02
LINC01876-208ENST00000637665 FBLN2P98095 1184 aa14.81□□□□□ -0.04
LINC01876-208ENST00000637665 SHROOM4Q9ULL8 1493 aa14.77□□□□□ -0.04
LINC01876-208ENST00000637665 ZBTB12Q9Y330 459 aaPredicted RBP14.73□□□□□ -0.05
LINC01876-208ENST00000637665 SPDYE4A6NLX3 237 aa14.7□□□□□ -0.06
LINC01876-208ENST00000637665 CC2D2AQ9P2K1 1620 aa14.67□□□□□ -0.06
LINC01876-208ENST00000637665 EIF4G1Q04637 1599 aaKnown RBP14.66□□□□□ -0.06
LINC01876-208ENST00000637665 OSCARQ8IYS5 282 aa14.65□□□□□ -0.06
LINC01876-208ENST00000637665 CECR2Q9BXF3 1484 aa14.63□□□□□ -0.07
LINC01876-208ENST00000637665 PROM2Q8N271 834 aa14.58□□□□□ -0.08
LINC01876-208ENST00000637665 ZNF692Q9BU19 519 aaPredicted RBP14.46□□□□□ -0.09
LINC01876-208ENST00000637665 SSUH2Q9Y2M2 353 aa14.46□□□□□ -0.09
LINC01876-208ENST00000637665 SPDYE2BA6NHP3 402 aa14.45□□□□□ -0.1
LINC01876-208ENST00000637665 SPDYE6P0CI01 402 aa14.45□□□□□ -0.1
LINC01876-208ENST00000637665 SPDYE2Q495Y8 402 aa14.45□□□□□ -0.1
LINC01876-208ENST00000637665 SMARCA4P51532 1647 aa14.23□□□□□ -0.13
LINC01876-208ENST00000637665 ATAD2BQ9ULI0 1458 aa14.23□□□□□ -0.13
LINC01876-208ENST00000637665 NCAPD3P42695 1498 aa14.22□□□□□ -0.13
LINC01876-208ENST00000637665 FBXO3Q9UK99 471 aa14.2□□□□□ -0.14
LINC01876-208ENST00000637665 BAZ1AQ9NRL2 1556 aaPredicted RBP14.18□□□□□ -0.14
LINC01876-208ENST00000637665 RBM42Q9BTD8 480 aaKnown RBP14.18□□□□□ -0.14
LINC01876-208ENST00000637665 SMARCA2P51531 1590 aa14.17□□□□□ -0.14
LINC01876-208ENST00000637665 AKT1S1Q96B36 256 aa14.15□□□□□ -0.14
LINC01876-208ENST00000637665 VASPP50552 380 aaPredicted RBP14.14□□□□□ -0.15
LINC01876-208ENST00000637665 MROH2BQ7Z745 1585 aa14.12□□□□□ -0.15
LINC01876-208ENST00000637665 BAZ1BQ9UIG0 1483 aaKnown RBP14.12□□□□□ -0.15
LINC01876-208ENST00000637665 HMGXB3Q12766 1538 aa14.11□□□□□ -0.15
LINC01876-208ENST00000637665 REM2Q8IYK8 340 aaPredicted RBP14.09□□□□□ -0.15
LINC01876-208ENST00000637665 IFNLR1Q8IU57 520 aaPredicted RBP14.07□□□□□ -0.16
LINC01876-208ENST00000637665 RTN4Q9NQC3 1192 aaKnown RBP14.07□□□□□ -0.16
LINC01876-208ENST00000637665 ERCC6Q03468 1493 aa14.06□□□□□ -0.16
LINC01876-208ENST00000637665 PEG3Q9GZU2 1588 aa14.04□□□□□ -0.16
LINC01876-208ENST00000637665 NESP48681 1621 aa14.02□□□□□ -0.16
LINC01876-208ENST00000637665 STAG3Q9UJ98 1225 aa14□□□□□ -0.17
LINC01876-208ENST00000637665 WIZO95785 1651 aa13.96□□□□□ -0.17
LINC01876-208ENST00000637665 PITPNM1O00562 1244 aa13.95□□□□□ -0.18
LINC01876-208ENST00000637665 SPDYE1Q8NFV5 336 aaPredicted RBP13.95□□□□□ -0.18
LINC01876-208ENST00000637665 CLEC11AQ9Y240 323 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms