RNA–Protein interactions for RNA: ENST00000637417.1

ARHGEF9-232, Transcript of Cdc42 guanine nucleotide exchange factor 9, humanhuman

TSL 5 BASIC

Gene ARHGEF9, Length 5,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9-232ENST00000637417 DCAF8L2P0C7V8 631 aa18.89■□□□□ 0.61
ARHGEF9-232ENST00000637417 NISCHQ9Y2I1 1504 aa18.49■□□□□ 0.55
ARHGEF9-232ENST00000637417 SUPT5HO00267 1087 aaKnown RBP17.68■□□□□ 0.42
ARHGEF9-232ENST00000637417 SHROOM4Q9ULL8 1493 aa17.46■□□□□ 0.39
ARHGEF9-232ENST00000637417 EHMT2Q96KQ7 1210 aa17.09■□□□□ 0.33
ARHGEF9-232ENST00000637417 APLP2Q06481 763 aa16.74■□□□□ 0.27
ARHGEF9-232ENST00000637417 FAM9AQ8IZU1 332 aaPredicted RBP16.69■□□□□ 0.26
ARHGEF9-232ENST00000637417 TTBK1Q5TCY1 1321 aaPredicted RBP16.46■□□□□ 0.23
ARHGEF9-232ENST00000637417 RANGAP1P46060 587 aaPredicted RBP16.44■□□□□ 0.22
ARHGEF9-232ENST00000637417 TRIM41Q8WV44 630 aa16.38■□□□□ 0.21
ARHGEF9-232ENST00000637417 ATP1B4Q9UN42 357 aaPredicted RBP16.31■□□□□ 0.2
ARHGEF9-232ENST00000637417 UBTFP17480 764 aaKnown RBP16.22■□□□□ 0.19
ARHGEF9-232ENST00000637417 PCGF6Q9BYE7 350 aa16.17■□□□□ 0.18
ARHGEF9-232ENST00000637417 PELP1Q8IZL8 1130 aaKnown RBP16.1■□□□□ 0.17
ARHGEF9-232ENST00000637417 ABCC9O60706 1549 aa16.05■□□□□ 0.16
ARHGEF9-232ENST00000637417 CCER1Q8TC90 406 aaPredicted RBP15.97■□□□□ 0.15
ARHGEF9-232ENST00000637417 PABPN1Q86U42 306 aaKnown RBP eCLIP15.85■□□□□ 0.13
ARHGEF9-232ENST00000637417 PPARGC1BQ86YN6 1023 aaKnown RBP15.82■□□□□ 0.12
ARHGEF9-232ENST00000637417 ZEB1P37275 1124 aaPredicted RBP15.82■□□□□ 0.12
ARHGEF9-232ENST00000637417 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.81■□□□□ 0.12
ARHGEF9-232ENST00000637417 HNRNPUL2Q1KMD3 747 aaKnown RBP15.81■□□□□ 0.12
ARHGEF9-232ENST00000637417 MYT1LQ9UL68 1186 aa15.76■□□□□ 0.11
ARHGEF9-232ENST00000637417 ITGAEP38570 1179 aa15.67■□□□□ 0.1
ARHGEF9-232ENST00000637417 CENPBP07199 599 aaPredicted RBP15.66■□□□□ 0.1
ARHGEF9-232ENST00000637417 CHIC1Q5VXU3 224 aa15.61■□□□□ 0.09
ARHGEF9-232ENST00000637417 LOC105371045A0A1W2PR82 267 aa15.58■□□□□ 0.08
ARHGEF9-232ENST00000637417 TRIM26Q12899 539 aaPredicted RBP15.52■□□□□ 0.08
ARHGEF9-232ENST00000637417 YTHDC1Q96MU7 727 aaKnown RBP15.46■□□□□ 0.07
ARHGEF9-232ENST00000637417 POLR3GLQ9BT43 218 aa15.46■□□□□ 0.06
ARHGEF9-232ENST00000637417 NEFLP07196 543 aa15.44■□□□□ 0.06
ARHGEF9-232ENST00000637417 ERICH6Q7L0X2 663 aa15.42■□□□□ 0.06
ARHGEF9-232ENST00000637417 FBLN2P98095 1184 aa15.34■□□□□ 0.05
ARHGEF9-232ENST00000637417 CNGB1Q14028 1251 aaPredicted RBP15.3■□□□□ 0.04
ARHGEF9-232ENST00000637417 FAM50AQ14320 339 aaKnown RBP15.29■□□□□ 0.04
ARHGEF9-232ENST00000637417 ZCCHC6Q5VYS8 1495 aaKnown RBP15.29■□□□□ 0.04
ARHGEF9-232ENST00000637417 SCRIBQ14160 1630 aa15.27■□□□□ 0.03
ARHGEF9-232ENST00000637417 CCDC180Q9P1Z9 1646 aa15.24■□□□□ 0.03
ARHGEF9-232ENST00000637417 SLC4A1APQ9BWU0 796 aaKnown RBP15.23■□□□□ 0.03
ARHGEF9-232ENST00000637417 TRIM52Q96A61 297 aa15.2■□□□□ 0.02
ARHGEF9-232ENST00000637417 HRCP23327 699 aa15.19■□□□□ 0.02
ARHGEF9-232ENST00000637417 P3H3Q8IVL6 736 aa15.08■□□□□ 0
ARHGEF9-232ENST00000637417 ARID3CA6NKF2 412 aa15.08■□□□□ 0
ARHGEF9-232ENST00000637417 NEUROD1Q13562 356 aa15.05■□□□□ 0
ARHGEF9-232ENST00000637417 CSRNP3Q8WYN3 585 aa15.03■□□□□ -0
ARHGEF9-232ENST00000637417 ZNF326Q5BKZ1 582 aaKnown RBP15.01□□□□□ -0.01
ARHGEF9-232ENST00000637417 RB1CC1Q8TDY2 1594 aa14.99□□□□□ -0.01
ARHGEF9-232ENST00000637417 DAXXQ9UER7 740 aaPredicted RBP14.95□□□□□ -0.02
ARHGEF9-232ENST00000637417 ZNF777Q9ULD5 760 aaPredicted RBP14.93□□□□□ -0.02
ARHGEF9-232ENST00000637417 CDK11AQ9UQ88 783 aaPredicted RBP14.9□□□□□ -0.02
ARHGEF9-232ENST00000637417 DIEXFQ68CQ4 756 aaKnown RBP14.89□□□□□ -0.03
ARHGEF9-232ENST00000637417 BCANQ96GW7 911 aa14.88□□□□□ -0.03
ARHGEF9-232ENST00000637417 NACADO15069 1562 aa14.86□□□□□ -0.03
ARHGEF9-232ENST00000637417 NPM1P06748 294 aaKnown RBP eCLIP14.82□□□□□ -0.04
ARHGEF9-232ENST00000637417 ESF1Q9H501 851 aaKnown RBP14.8□□□□□ -0.04
ARHGEF9-232ENST00000637417 CLSPNQ9HAW4 1339 aa14.8□□□□□ -0.04
ARHGEF9-232ENST00000637417 ANP32CO43423 234 aa14.75□□□□□ -0.05
ARHGEF9-232ENST00000637417 RSF1Q96T23 1441 aaPredicted RBP14.74□□□□□ -0.05
ARHGEF9-232ENST00000637417 PLPPR3Q6T4P5 718 aa14.71□□□□□ -0.06
ARHGEF9-232ENST00000637417 SLC24A1O60721 1099 aa14.7□□□□□ -0.06
ARHGEF9-232ENST00000637417 CHGAP10645 457 aaKnown RBP14.69□□□□□ -0.06
ARHGEF9-232ENST00000637417 CHMP7Q8WUX9 453 aaPredicted RBP14.69□□□□□ -0.06
ARHGEF9-232ENST00000637417 STAG3Q9UJ98 1225 aa14.68□□□□□ -0.06
ARHGEF9-232ENST00000637417 NEFMP07197 916 aa14.66□□□□□ -0.06
ARHGEF9-232ENST00000637417 BAZ1BQ9UIG0 1483 aaKnown RBP14.65□□□□□ -0.06
ARHGEF9-232ENST00000637417 DCAF1Q9Y4B6 1507 aa14.61□□□□□ -0.07
ARHGEF9-232ENST00000637417 ZNF316A6NFI3 1004 aaPredicted RBP14.61□□□□□ -0.07
ARHGEF9-232ENST00000637417 ZBTB47Q9UFB7 747 aaPredicted RBP14.61□□□□□ -0.07
ARHGEF9-232ENST00000637417 CHIC2Q9UKJ5 165 aa14.6□□□□□ -0.07
ARHGEF9-232ENST00000637417 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.58□□□□□ -0.07
ARHGEF9-232ENST00000637417 CANXP27824 592 aaKnown RBP14.56□□□□□ -0.08
ARHGEF9-232ENST00000637417 TSPY4P0CV99 314 aa14.56□□□□□ -0.08
ARHGEF9-232ENST00000637417 TSPY10P0CW01 314 aa14.56□□□□□ -0.08
ARHGEF9-232ENST00000637417 TONSLQ96HA7 1378 aa14.55□□□□□ -0.08
ARHGEF9-232ENST00000637417 CECR2Q9BXF3 1484 aa14.55□□□□□ -0.08
ARHGEF9-232ENST00000637417 BCL11AQ9H165 835 aa14.55□□□□□ -0.08
ARHGEF9-232ENST00000637417 MTUS2Q5JR59 1369 aa14.53□□□□□ -0.08
ARHGEF9-232ENST00000637417 BAZ1AQ9NRL2 1556 aaPredicted RBP14.53□□□□□ -0.08
ARHGEF9-232ENST00000637417 WRNQ14191 1432 aaPredicted RBP eCLIP14.52□□□□□ -0.09
ARHGEF9-232ENST00000637417 KCNH8Q96L42 1107 aa14.48□□□□□ -0.09
ARHGEF9-232ENST00000637417 RTL5Q5HYW3 569 aaPredicted RBP14.46□□□□□ -0.09
ARHGEF9-232ENST00000637417 CLIP1P30622 1438 aa14.46□□□□□ -0.1
ARHGEF9-232ENST00000637417 EEA1Q15075 1411 aa14.44□□□□□ -0.1
ARHGEF9-232ENST00000637417 PLEKHD1A6NEE1 506 aa14.43□□□□□ -0.1
ARHGEF9-232ENST00000637417 ERCC6Q03468 1493 aa14.42□□□□□ -0.1
ARHGEF9-232ENST00000637417 KDM2AQ9Y2K7 1162 aa14.41□□□□□ -0.1
ARHGEF9-232ENST00000637417 KIF27Q86VH2 1401 aa14.41□□□□□ -0.1
ARHGEF9-232ENST00000637417 MYT1Q01538 1121 aa14.39□□□□□ -0.11
ARHGEF9-232ENST00000637417 GTF3C3Q9Y5Q9 886 aa14.39□□□□□ -0.11
ARHGEF9-232ENST00000637417 GOLGA3Q08378 1498 aa14.36□□□□□ -0.11
ARHGEF9-232ENST00000637417 RRP7BPQ9NSQ0 103 aa14.36□□□□□ -0.11
ARHGEF9-232ENST00000637417 DDX10Q13206 875 aaKnown RBP14.36□□□□□ -0.11
ARHGEF9-232ENST00000637417 SENP3Q9H4L4 574 aaPredicted RBP14.33□□□□□ -0.12
ARHGEF9-232ENST00000637417 MROH2BQ7Z745 1585 aa14.33□□□□□ -0.12
ARHGEF9-232ENST00000637417 FAM9BQ8IZU0 186 aa14.31□□□□□ -0.12
ARHGEF9-232ENST00000637417 PPP1R15AO75807 674 aaPredicted RBP14.31□□□□□ -0.12
ARHGEF9-232ENST00000637417 SCAF1Q9H7N4 1312 aaKnown RBP14.31□□□□□ -0.12
ARHGEF9-232ENST00000637417 CEP162Q5TB80 1403 aa14.31□□□□□ -0.12
ARHGEF9-232ENST00000637417 SALL2Q9Y467 1007 aaPredicted RBP14.3□□□□□ -0.12
ARHGEF9-232ENST00000637417 ARID4BQ4LE39 1312 aaPredicted RBP14.29□□□□□ -0.12
ARHGEF9-232ENST00000637417 CFDP1Q9UEE9 299 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms