RNA–Protein interactions for RNA: ENST00000637340.1

EFHC1-232, Transcript of EF-hand domain containing 1, humanhuman

TSL 1 (best)

Gene EFHC1, Length 4,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-232ENST00000637340 NISCHQ9Y2I1 1504 aa19.42■□□□□ 0.7
EFHC1-232ENST00000637340 SUPT5HO00267 1087 aaKnown RBP18.78■□□□□ 0.6
EFHC1-232ENST00000637340 SHROOM4Q9ULL8 1493 aa18.67■□□□□ 0.58
EFHC1-232ENST00000637340 PCGF6Q9BYE7 350 aa18.5■□□□□ 0.55
EFHC1-232ENST00000637340 PPARGC1BQ86YN6 1023 aaKnown RBP18.35■□□□□ 0.53
EFHC1-232ENST00000637340 HRCP23327 699 aa18.27■□□□□ 0.51
EFHC1-232ENST00000637340 DCAF8L2P0C7V8 631 aa18.25■□□□□ 0.51
EFHC1-232ENST00000637340 EHMT2Q96KQ7 1210 aa17.98■□□□□ 0.47
EFHC1-232ENST00000637340 LOC105371045A0A1W2PR82 267 aa17.73■□□□□ 0.43
EFHC1-232ENST00000637340 PELP1Q8IZL8 1130 aaKnown RBP17.72■□□□□ 0.43
EFHC1-232ENST00000637340 CHIC1Q5VXU3 224 aa17.69■□□□□ 0.42
EFHC1-232ENST00000637340 FAM9AQ8IZU1 332 aaPredicted RBP17.61■□□□□ 0.41
EFHC1-232ENST00000637340 TTBK1Q5TCY1 1321 aaPredicted RBP17.46■□□□□ 0.39
EFHC1-232ENST00000637340 TRIM26Q12899 539 aaPredicted RBP17.43■□□□□ 0.38
EFHC1-232ENST00000637340 MYO15BQ96JP2 1530 aa17.39■□□□□ 0.37
EFHC1-232ENST00000637340 SCAF1Q9H7N4 1312 aaKnown RBP17.37■□□□□ 0.37
EFHC1-232ENST00000637340 YTHDC1Q96MU7 727 aaKnown RBP17.3■□□□□ 0.36
EFHC1-232ENST00000637340 ZEB1P37275 1124 aaPredicted RBP17.3■□□□□ 0.36
EFHC1-232ENST00000637340 CCER1Q8TC90 406 aaPredicted RBP17.23■□□□□ 0.35
EFHC1-232ENST00000637340 CENPBP07199 599 aaPredicted RBP17.18■□□□□ 0.34
EFHC1-232ENST00000637340 GTF3C3Q9Y5Q9 886 aa17.16■□□□□ 0.34
EFHC1-232ENST00000637340 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.12■□□□□ 0.33
EFHC1-232ENST00000637340 TRIM41Q8WV44 630 aa17.09■□□□□ 0.33
EFHC1-232ENST00000637340 NEUROD1Q13562 356 aa17.04■□□□□ 0.32
EFHC1-232ENST00000637340 ACIN1Q9UKV3 1341 aaKnown RBP17.01■□□□□ 0.31
EFHC1-232ENST00000637340 MYT1Q01538 1121 aa17■□□□□ 0.31
EFHC1-232ENST00000637340 DIEXFQ68CQ4 756 aaKnown RBP16.95■□□□□ 0.3
EFHC1-232ENST00000637340 DCAF1Q9Y4B6 1507 aa16.83■□□□□ 0.28
EFHC1-232ENST00000637340 RANGAP1P46060 587 aaPredicted RBP16.67■□□□□ 0.26
EFHC1-232ENST00000637340 HNRNPUL2Q1KMD3 747 aaKnown RBP16.58■□□□□ 0.24
EFHC1-232ENST00000637340 UBTFP17480 764 aaKnown RBP16.5■□□□□ 0.23
EFHC1-232ENST00000637340 CCDC180Q9P1Z9 1646 aa16.49■□□□□ 0.23
EFHC1-232ENST00000637340 BCANQ96GW7 911 aa16.48■□□□□ 0.23
EFHC1-232ENST00000637340 ZNF316A6NFI3 1004 aaPredicted RBP16.45■□□□□ 0.22
EFHC1-232ENST00000637340 MIER1Q8N108 512 aa16.42■□□□□ 0.22
EFHC1-232ENST00000637340 APLP2Q06481 763 aa16.39■□□□□ 0.21
EFHC1-232ENST00000637340 ZCCHC6Q5VYS8 1495 aaKnown RBP16.34■□□□□ 0.21
EFHC1-232ENST00000637340 ERICH6Q7L0X2 663 aa16.27■□□□□ 0.19
EFHC1-232ENST00000637340 ITGAEP38570 1179 aa16.21■□□□□ 0.19
EFHC1-232ENST00000637340 NEFLP07196 543 aa16.16■□□□□ 0.18
EFHC1-232ENST00000637340 BCL11AQ9H165 835 aa16.13■□□□□ 0.17
EFHC1-232ENST00000637340 ANP32EQ9BTT0 268 aa16.05■□□□□ 0.16
EFHC1-232ENST00000637340 SUPT16HQ9Y5B9 1047 aaKnown RBP16.04■□□□□ 0.16
EFHC1-232ENST00000637340 FKBP8Q14318 412 aa16.04■□□□□ 0.16
EFHC1-232ENST00000637340 CSRNP3Q8WYN3 585 aa15.99■□□□□ 0.15
EFHC1-232ENST00000637340 TSHZ2Q9NRE2 1034 aa15.93■□□□□ 0.14
EFHC1-232ENST00000637340 ATP1B4Q9UN42 357 aaPredicted RBP15.91■□□□□ 0.14
EFHC1-232ENST00000637340 CNGB1Q14028 1251 aaPredicted RBP15.9■□□□□ 0.14
EFHC1-232ENST00000637340 TRIM52Q96A61 297 aa15.89■□□□□ 0.13
EFHC1-232ENST00000637340 RSF1Q96T23 1441 aaPredicted RBP15.87■□□□□ 0.13
EFHC1-232ENST00000637340 HIRIP3Q9BW71 556 aaPredicted RBP15.85■□□□□ 0.13
EFHC1-232ENST00000637340 IRX6P78412 446 aaPredicted RBP15.84■□□□□ 0.13
EFHC1-232ENST00000637340 DDX10Q13206 875 aaKnown RBP15.83■□□□□ 0.12
EFHC1-232ENST00000637340 KCNH8Q96L42 1107 aa15.8■□□□□ 0.12
EFHC1-232ENST00000637340 SCRIBQ14160 1630 aa15.79■□□□□ 0.12
EFHC1-232ENST00000637340 CEP162Q5TB80 1403 aa15.76■□□□□ 0.11
EFHC1-232ENST00000637340 RB1CC1Q8TDY2 1594 aa15.76■□□□□ 0.11
EFHC1-232ENST00000637340 NBR1Q14596 966 aa15.71■□□□□ 0.1
EFHC1-232ENST00000637340 RBM19Q9Y4C8 960 aaKnown RBP15.7■□□□□ 0.1
EFHC1-232ENST00000637340 CDK11AQ9UQ88 783 aaPredicted RBP15.69■□□□□ 0.1
EFHC1-232ENST00000637340 CLSPNQ9HAW4 1339 aa15.66■□□□□ 0.1
EFHC1-232ENST00000637340 ANP32CO43423 234 aa15.63■□□□□ 0.09
EFHC1-232ENST00000637340 FAM50AQ14320 339 aaKnown RBP15.61■□□□□ 0.09
EFHC1-232ENST00000637340 POLR3GLQ9BT43 218 aa15.59■□□□□ 0.09
EFHC1-232ENST00000637340 HNRNPUQ00839 825 aaKnown RBP eCLIP15.58■□□□□ 0.08
EFHC1-232ENST00000637340 SOGA1O94964 1423 aa15.58■□□□□ 0.08
EFHC1-232ENST00000637340 SENP3-EIF4A1A0A087X0R7 540 aa15.57■□□□□ 0.08
EFHC1-232ENST00000637340 RTL5Q5HYW3 569 aaPredicted RBP15.55■□□□□ 0.08
EFHC1-232ENST00000637340 CECR2Q9BXF3 1484 aa15.54■□□□□ 0.08
EFHC1-232ENST00000637340 RTN4Q9NQC3 1192 aaKnown RBP15.52■□□□□ 0.08
EFHC1-232ENST00000637340 ABCC8Q09428 1581 aa15.48■□□□□ 0.07
EFHC1-232ENST00000637340 SIN3AQ96ST3 1273 aa15.48■□□□□ 0.07
EFHC1-232ENST00000637340 CCDC88BA6NC98 1476 aa15.48■□□□□ 0.07
EFHC1-232ENST00000637340 TNIKQ9UKE5 1360 aa15.48■□□□□ 0.07
EFHC1-232ENST00000637340 ABCC9O60706 1549 aa15.47■□□□□ 0.07
EFHC1-232ENST00000637340 CLIP1P30622 1438 aa15.47■□□□□ 0.07
EFHC1-232ENST00000637340 NPM2Q86SE8 214 aaKnown RBP15.47■□□□□ 0.07
EFHC1-232ENST00000637340 DEKP35659 375 aaKnown RBP15.45■□□□□ 0.06
EFHC1-232ENST00000637340 PABPN1Q86U42 306 aaKnown RBP eCLIP15.43■□□□□ 0.06
EFHC1-232ENST00000637340 FAM9BQ8IZU0 186 aa15.43■□□□□ 0.06
EFHC1-232ENST00000637340 P3H3Q8IVL6 736 aa15.41■□□□□ 0.06
EFHC1-232ENST00000637340 RUSC2Q8N2Y8 1516 aa15.4■□□□□ 0.06
EFHC1-232ENST00000637340 EIF5BO60841 1220 aaKnown RBP15.39■□□□□ 0.05
EFHC1-232ENST00000637340 B4GALNT3Q6L9W6 998 aa15.39■□□□□ 0.05
EFHC1-232ENST00000637340 KANK4Q5T7N3 995 aaPredicted RBP15.36■□□□□ 0.05
EFHC1-232ENST00000637340 MROH2BQ7Z745 1585 aa15.35■□□□□ 0.05
EFHC1-232ENST00000637340 CCDC136Q96JN2 1154 aa15.35■□□□□ 0.05
EFHC1-232ENST00000637340 GOLGA3Q08378 1498 aa15.33■□□□□ 0.05
EFHC1-232ENST00000637340 MSH5O43196 834 aa15.33■□□□□ 0.04
EFHC1-232ENST00000637340 WRNQ14191 1432 aaPredicted RBP eCLIP15.31■□□□□ 0.04
EFHC1-232ENST00000637340 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.31■□□□□ 0.04
EFHC1-232ENST00000637340 ANP32AP39687 249 aaKnown RBP15.3■□□□□ 0.04
EFHC1-232ENST00000637340 DHX57Q6P158 1386 aaKnown RBP15.29■□□□□ 0.04
EFHC1-232ENST00000637340 PRKCSHP14314 528 aaPredicted RBP15.28■□□□□ 0.04
EFHC1-232ENST00000637340 ANO8Q9HCE9 1232 aaPredicted RBP15.26■□□□□ 0.03
EFHC1-232ENST00000637340 WIZO95785 1651 aa15.26■□□□□ 0.03
EFHC1-232ENST00000637340 SALL2Q9Y467 1007 aaPredicted RBP15.25■□□□□ 0.03
EFHC1-232ENST00000637340 ZBTB47Q9UFB7 747 aaPredicted RBP15.24■□□□□ 0.03
EFHC1-232ENST00000637340 LAS1LQ9Y4W2 734 aaKnown RBP15.22■□□□□ 0.03
EFHC1-232ENST00000637340 DAXXQ9UER7 740 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms