RNA–Protein interactions for RNA: ENST00000637250.2

TCF4-286, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-286ENST00000637250 DCAF8L2P0C7V8 631 aa11.85□□□□□ -0.51
TCF4-286ENST00000637250 NISCHQ9Y2I1 1504 aa11.65□□□□□ -0.55
TCF4-286ENST00000637250 SHROOM4Q9ULL8 1493 aa10.91□□□□□ -0.66
TCF4-286ENST00000637250 MYT1Q01538 1121 aa10.88□□□□□ -0.67
TCF4-286ENST00000637250 SUPT5HO00267 1087 aaKnown RBP10.85□□□□□ -0.67
TCF4-286ENST00000637250 PELP1Q8IZL8 1130 aaKnown RBP10.84□□□□□ -0.67
TCF4-286ENST00000637250 FAM9AQ8IZU1 332 aaPredicted RBP10.6□□□□□ -0.71
TCF4-286ENST00000637250 EHMT2Q96KQ7 1210 aa10.54□□□□□ -0.72
TCF4-286ENST00000637250 APLP2Q06481 763 aa10.41□□□□□ -0.74
TCF4-286ENST00000637250 ABCC9O60706 1549 aa10.28□□□□□ -0.76
TCF4-286ENST00000637250 ERICH6Q7L0X2 663 aa10.25□□□□□ -0.77
TCF4-286ENST00000637250 ATP1B4Q9UN42 357 aaPredicted RBP10.24□□□□□ -0.77
TCF4-286ENST00000637250 RANGAP1P46060 587 aaPredicted RBP10.23□□□□□ -0.77
TCF4-286ENST00000637250 CENPBP07199 599 aaPredicted RBP10.16□□□□□ -0.78
TCF4-286ENST00000637250 TTBK1Q5TCY1 1321 aaPredicted RBP10.15□□□□□ -0.78
TCF4-286ENST00000637250 TRIM41Q8WV44 630 aa10.14□□□□□ -0.79
TCF4-286ENST00000637250 CCER1Q8TC90 406 aaPredicted RBP10.07□□□□□ -0.8
TCF4-286ENST00000637250 UBTFP17480 764 aaKnown RBP10.07□□□□□ -0.8
TCF4-286ENST00000637250 PABPN1Q86U42 306 aaKnown RBP eCLIP10.06□□□□□ -0.8
TCF4-286ENST00000637250 CCDC180Q9P1Z9 1646 aa10.02□□□□□ -0.81
TCF4-286ENST00000637250 MYT1LQ9UL68 1186 aa9.99□□□□□ -0.81
TCF4-286ENST00000637250 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.94□□□□□ -0.82
TCF4-286ENST00000637250 HNRNPUL2Q1KMD3 747 aaKnown RBP9.94□□□□□ -0.82
TCF4-286ENST00000637250 PCGF6Q9BYE7 350 aa9.94□□□□□ -0.82
TCF4-286ENST00000637250 SCRIBQ14160 1630 aa9.89□□□□□ -0.83
TCF4-286ENST00000637250 ZEB1P37275 1124 aaPredicted RBP9.87□□□□□ -0.83
TCF4-286ENST00000637250 RB1CC1Q8TDY2 1594 aa9.79□□□□□ -0.84
TCF4-286ENST00000637250 YTHDC1Q96MU7 727 aaKnown RBP9.76□□□□□ -0.85
TCF4-286ENST00000637250 CHIC1Q5VXU3 224 aa9.75□□□□□ -0.85
TCF4-286ENST00000637250 FBLN2P98095 1184 aa9.75□□□□□ -0.85
TCF4-286ENST00000637250 NEFLP07196 543 aa9.73□□□□□ -0.85
TCF4-286ENST00000637250 HRCP23327 699 aa9.71□□□□□ -0.85
TCF4-286ENST00000637250 PPARGC1BQ86YN6 1023 aaKnown RBP9.67□□□□□ -0.86
TCF4-286ENST00000637250 ITGAEP38570 1179 aa9.67□□□□□ -0.86
TCF4-286ENST00000637250 NACADO15069 1562 aa9.61□□□□□ -0.87
TCF4-286ENST00000637250 ZCCHC6Q5VYS8 1495 aaKnown RBP9.6□□□□□ -0.87
TCF4-286ENST00000637250 RTL5Q5HYW3 569 aaPredicted RBP9.56□□□□□ -0.88
TCF4-286ENST00000637250 SLC4A1APQ9BWU0 796 aaKnown RBP9.56□□□□□ -0.88
TCF4-286ENST00000637250 POLR3GLQ9BT43 218 aa9.55□□□□□ -0.88
TCF4-286ENST00000637250 FAM50AQ14320 339 aaKnown RBP9.54□□□□□ -0.88
TCF4-286ENST00000637250 DAXXQ9UER7 740 aaPredicted RBP9.5□□□□□ -0.89
TCF4-286ENST00000637250 LOC105371045A0A1W2PR82 267 aa9.48□□□□□ -0.89
TCF4-286ENST00000637250 GTF3C3Q9Y5Q9 886 aa9.48□□□□□ -0.89
TCF4-286ENST00000637250 TRIM52Q96A61 297 aa9.47□□□□□ -0.89
TCF4-286ENST00000637250 NPM1P06748 294 aaKnown RBP eCLIP9.47□□□□□ -0.89
TCF4-286ENST00000637250 BCANQ96GW7 911 aa9.47□□□□□ -0.89
TCF4-286ENST00000637250 ERCC6Q03468 1493 aa9.46□□□□□ -0.9
TCF4-286ENST00000637250 TRIM26Q12899 539 aaPredicted RBP9.46□□□□□ -0.9
TCF4-286ENST00000637250 GLIPR1L2Q4G1C9 344 aa9.45□□□□□ -0.9
TCF4-286ENST00000637250 EIF5BO60841 1220 aaKnown RBP9.43□□□□□ -0.9
TCF4-286ENST00000637250 ESF1Q9H501 851 aaKnown RBP9.43□□□□□ -0.9
TCF4-286ENST00000637250 ARID3CA6NKF2 412 aa9.43□□□□□ -0.9
TCF4-286ENST00000637250 P3H3Q8IVL6 736 aa9.42□□□□□ -0.9
TCF4-286ENST00000637250 BAZ1BQ9UIG0 1483 aaKnown RBP9.39□□□□□ -0.91
TCF4-286ENST00000637250 PLPPR3Q6T4P5 718 aa9.38□□□□□ -0.91
TCF4-286ENST00000637250 CDK11AQ9UQ88 783 aaPredicted RBP9.37□□□□□ -0.91
TCF4-286ENST00000637250 CNGB1Q14028 1251 aaPredicted RBP9.37□□□□□ -0.91
TCF4-286ENST00000637250 CHMP7Q8WUX9 453 aaPredicted RBP9.37□□□□□ -0.91
TCF4-286ENST00000637250 ZNF777Q9ULD5 760 aaPredicted RBP9.36□□□□□ -0.91
TCF4-286ENST00000637250 ZNF316A6NFI3 1004 aaPredicted RBP9.31□□□□□ -0.92
TCF4-286ENST00000637250 DIEXFQ68CQ4 756 aaKnown RBP9.31□□□□□ -0.92
TCF4-286ENST00000637250 STAG3Q9UJ98 1225 aa9.31□□□□□ -0.92
TCF4-286ENST00000637250 ACIN1Q9UKV3 1341 aaKnown RBP9.31□□□□□ -0.92
TCF4-286ENST00000637250 NEUROD1Q13562 356 aa9.3□□□□□ -0.92
TCF4-286ENST00000637250 ZNF326Q5BKZ1 582 aaKnown RBP9.28□□□□□ -0.92
TCF4-286ENST00000637250 CSRNP3Q8WYN3 585 aa9.27□□□□□ -0.93
TCF4-286ENST00000637250 BCL11AQ9H165 835 aa9.27□□□□□ -0.93
TCF4-286ENST00000637250 BAZ1AQ9NRL2 1556 aaPredicted RBP9.25□□□□□ -0.93
TCF4-286ENST00000637250 SLC24A1O60721 1099 aa9.23□□□□□ -0.93
TCF4-286ENST00000637250 CHGAP10645 457 aaKnown RBP9.21□□□□□ -0.93
TCF4-286ENST00000637250 DCAF1Q9Y4B6 1507 aa9.2□□□□□ -0.94
TCF4-286ENST00000637250 SMARCA2P51531 1590 aa9.2□□□□□ -0.94
TCF4-286ENST00000637250 SCAF1Q9H7N4 1312 aaKnown RBP9.2□□□□□ -0.94
TCF4-286ENST00000637250 NEFMP07197 916 aa9.15□□□□□ -0.94
TCF4-286ENST00000637250 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.15□□□□□ -0.94
TCF4-286ENST00000637250 KCNH8Q96L42 1107 aa9.15□□□□□ -0.94
TCF4-286ENST00000637250 ARID4BQ4LE39 1312 aaPredicted RBP9.15□□□□□ -0.94
TCF4-286ENST00000637250 EIF4G1Q04637 1599 aaKnown RBP9.14□□□□□ -0.95
TCF4-286ENST00000637250 TRHP20396 242 aaPredicted RBP9.14□□□□□ -0.95
TCF4-286ENST00000637250 ANP32EQ9BTT0 268 aa9.13□□□□□ -0.95
TCF4-286ENST00000637250 RSF1Q96T23 1441 aaPredicted RBP9.11□□□□□ -0.95
TCF4-286ENST00000637250 PDS5BQ9NTI5 1447 aa9.1□□□□□ -0.95
TCF4-286ENST00000637250 MTUS2Q5JR59 1369 aa9.1□□□□□ -0.95
TCF4-286ENST00000637250 TSPY4P0CV99 314 aa9.09□□□□□ -0.95
TCF4-286ENST00000637250 TSPY10P0CW01 314 aa9.09□□□□□ -0.95
TCF4-286ENST00000637250 KIF27Q86VH2 1401 aa9.09□□□□□ -0.95
TCF4-286ENST00000637250 CECR2Q9BXF3 1484 aa9.09□□□□□ -0.95
TCF4-286ENST00000637250 ANP32AP39687 249 aaKnown RBP9.08□□□□□ -0.96
TCF4-286ENST00000637250 WRNQ14191 1432 aaPredicted RBP eCLIP9.08□□□□□ -0.96
TCF4-286ENST00000637250 PLEKHD1A6NEE1 506 aa9.08□□□□□ -0.96
TCF4-286ENST00000637250 WIZO95785 1651 aa9.08□□□□□ -0.96
TCF4-286ENST00000637250 ZBTB47Q9UFB7 747 aaPredicted RBP9.07□□□□□ -0.96
TCF4-286ENST00000637250 CHIC2Q9UKJ5 165 aa9.06□□□□□ -0.96
TCF4-286ENST00000637250 ANP32CO43423 234 aa9.06□□□□□ -0.96
TCF4-286ENST00000637250 CLSPNQ9HAW4 1339 aa9.06□□□□□ -0.96
TCF4-286ENST00000637250 NBR1Q14596 966 aa9.05□□□□□ -0.96
TCF4-286ENST00000637250 GOLGA3Q08378 1498 aa9.05□□□□□ -0.96
TCF4-286ENST00000637250 PPP1R15AO75807 674 aaPredicted RBP9.04□□□□□ -0.96
TCF4-286ENST00000637250 C14orf37Q86TY3 774 aa9.03□□□□□ -0.96
TCF4-286ENST00000637250 CANXP27824 592 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms