RNA–Protein interactions for RNA: ENST00000636627.1

CACNA1D-214, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-214ENST00000636627 NISCHQ9Y2I1 1504 aa22.53■■□□□ 1.2
CACNA1D-214ENST00000636627 DCAF8L2P0C7V8 631 aa20.06■□□□□ 0.8
CACNA1D-214ENST00000636627 SUPT5HO00267 1087 aaKnown RBP19.98■□□□□ 0.79
CACNA1D-214ENST00000636627 SHROOM4Q9ULL8 1493 aa19.95■□□□□ 0.78
CACNA1D-214ENST00000636627 PCGF6Q9BYE7 350 aa18.97■□□□□ 0.63
CACNA1D-214ENST00000636627 CHIC1Q5VXU3 224 aa18.95■□□□□ 0.62
CACNA1D-214ENST00000636627 ZCCHC6Q5VYS8 1495 aaKnown RBP18.95■□□□□ 0.62
CACNA1D-214ENST00000636627 CCDC180Q9P1Z9 1646 aa18.94■□□□□ 0.62
CACNA1D-214ENST00000636627 HRCP23327 699 aa18.81■□□□□ 0.6
CACNA1D-214ENST00000636627 ZEB1P37275 1124 aaPredicted RBP18.76■□□□□ 0.59
CACNA1D-214ENST00000636627 TRIM41Q8WV44 630 aa18.71■□□□□ 0.59
CACNA1D-214ENST00000636627 TRIM26Q12899 539 aaPredicted RBP18.61■□□□□ 0.57
CACNA1D-214ENST00000636627 FAM9AQ8IZU1 332 aaPredicted RBP18.54■□□□□ 0.56
CACNA1D-214ENST00000636627 EHMT2Q96KQ7 1210 aa18.45■□□□□ 0.54
CACNA1D-214ENST00000636627 LOC105371045A0A1W2PR82 267 aa18.43■□□□□ 0.54
CACNA1D-214ENST00000636627 DCAF1Q9Y4B6 1507 aa18.37■□□□□ 0.53
CACNA1D-214ENST00000636627 APLP2Q06481 763 aa18.21■□□□□ 0.51
CACNA1D-214ENST00000636627 CCER1Q8TC90 406 aaPredicted RBP18.19■□□□□ 0.5
CACNA1D-214ENST00000636627 PELP1Q8IZL8 1130 aaKnown RBP18.18■□□□□ 0.5
CACNA1D-214ENST00000636627 MYO15BQ96JP2 1530 aa18.16■□□□□ 0.5
CACNA1D-214ENST00000636627 PPARGC1BQ86YN6 1023 aaKnown RBP18.11■□□□□ 0.49
CACNA1D-214ENST00000636627 CENPBP07199 599 aaPredicted RBP18.1■□□□□ 0.49
CACNA1D-214ENST00000636627 UBTFP17480 764 aaKnown RBP18.03■□□□□ 0.48
CACNA1D-214ENST00000636627 SCRIBQ14160 1630 aa18.03■□□□□ 0.48
CACNA1D-214ENST00000636627 ABCC9O60706 1549 aa17.98■□□□□ 0.47
CACNA1D-214ENST00000636627 RSF1Q96T23 1441 aaPredicted RBP17.93■□□□□ 0.46
CACNA1D-214ENST00000636627 TTBK1Q5TCY1 1321 aaPredicted RBP17.93■□□□□ 0.46
CACNA1D-214ENST00000636627 NACADO15069 1562 aa17.82■□□□□ 0.44
CACNA1D-214ENST00000636627 RB1CC1Q8TDY2 1594 aa17.79■□□□□ 0.44
CACNA1D-214ENST00000636627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.7■□□□□ 0.42
CACNA1D-214ENST00000636627 DIEXFQ68CQ4 756 aaKnown RBP17.63■□□□□ 0.41
CACNA1D-214ENST00000636627 MYT1Q01538 1121 aa17.63■□□□□ 0.41
CACNA1D-214ENST00000636627 RANGAP1P46060 587 aaPredicted RBP17.61■□□□□ 0.41
CACNA1D-214ENST00000636627 CSRNP3Q8WYN3 585 aa17.61■□□□□ 0.41
CACNA1D-214ENST00000636627 EEA1Q15075 1411 aa17.54■□□□□ 0.4
CACNA1D-214ENST00000636627 BAZ1AQ9NRL2 1556 aaPredicted RBP17.53■□□□□ 0.4
CACNA1D-214ENST00000636627 HNRNPUL2Q1KMD3 747 aaKnown RBP17.51■□□□□ 0.39
CACNA1D-214ENST00000636627 CECR2Q9BXF3 1484 aa17.46■□□□□ 0.38
CACNA1D-214ENST00000636627 YTHDC1Q96MU7 727 aaKnown RBP17.45■□□□□ 0.38
CACNA1D-214ENST00000636627 PABPN1Q86U42 306 aaKnown RBP eCLIP17.43■□□□□ 0.38
CACNA1D-214ENST00000636627 ZNF316A6NFI3 1004 aaPredicted RBP17.42■□□□□ 0.38
CACNA1D-214ENST00000636627 MROH2BQ7Z745 1585 aa17.4■□□□□ 0.38
CACNA1D-214ENST00000636627 ACIN1Q9UKV3 1341 aaKnown RBP17.4■□□□□ 0.38
CACNA1D-214ENST00000636627 TNIKQ9UKE5 1360 aa17.35■□□□□ 0.37
CACNA1D-214ENST00000636627 CEP162Q5TB80 1403 aa17.34■□□□□ 0.37
CACNA1D-214ENST00000636627 GOLGA3Q08378 1498 aa17.31■□□□□ 0.36
CACNA1D-214ENST00000636627 GTF3C3Q9Y5Q9 886 aa17.28■□□□□ 0.36
CACNA1D-214ENST00000636627 ATP1B4Q9UN42 357 aaPredicted RBP17.27■□□□□ 0.36
CACNA1D-214ENST00000636627 WRNQ14191 1432 aaPredicted RBP eCLIP17.23■□□□□ 0.35
CACNA1D-214ENST00000636627 WIZO95785 1651 aa17.23■□□□□ 0.35
CACNA1D-214ENST00000636627 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.35
CACNA1D-214ENST00000636627 NEFLP07196 543 aa17.21■□□□□ 0.35
CACNA1D-214ENST00000636627 CEP164Q9UPV0 1460 aa17.2■□□□□ 0.34
CACNA1D-214ENST00000636627 CLIP1P30622 1438 aa17.2■□□□□ 0.34
CACNA1D-214ENST00000636627 ITGAEP38570 1179 aa17.17■□□□□ 0.34
CACNA1D-214ENST00000636627 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
CACNA1D-214ENST00000636627 CCDC88BA6NC98 1476 aa17.16■□□□□ 0.34
CACNA1D-214ENST00000636627 CLSPNQ9HAW4 1339 aa17.13■□□□□ 0.33
CACNA1D-214ENST00000636627 NEUROD1Q13562 356 aa17.09■□□□□ 0.33
CACNA1D-214ENST00000636627 SOGA1O94964 1423 aa17.07■□□□□ 0.32
CACNA1D-214ENST00000636627 BAZ1BQ9UIG0 1483 aaKnown RBP17.07■□□□□ 0.32
CACNA1D-214ENST00000636627 ABCC8Q09428 1581 aa17.06■□□□□ 0.32
CACNA1D-214ENST00000636627 SMARCA4P51532 1647 aa17.05■□□□□ 0.32
CACNA1D-214ENST00000636627 FAM50AQ14320 339 aaKnown RBP16.98■□□□□ 0.31
CACNA1D-214ENST00000636627 VPS8Q8N3P4 1428 aa16.95■□□□□ 0.3
CACNA1D-214ENST00000636627 SMARCA2P51531 1590 aa16.93■□□□□ 0.3
CACNA1D-214ENST00000636627 KIF27Q86VH2 1401 aa16.9■□□□□ 0.3
CACNA1D-214ENST00000636627 ERICH6Q7L0X2 663 aa16.89■□□□□ 0.3
CACNA1D-214ENST00000636627 MIER1Q8N108 512 aa16.88■□□□□ 0.29
CACNA1D-214ENST00000636627 ANP32CO43423 234 aa16.83■□□□□ 0.29
CACNA1D-214ENST00000636627 ATAD2BQ9ULI0 1458 aa16.75■□□□□ 0.27
CACNA1D-214ENST00000636627 RUSC2Q8N2Y8 1516 aa16.73■□□□□ 0.27
CACNA1D-214ENST00000636627 CCNB3Q8WWL7 1395 aa16.7■□□□□ 0.26
CACNA1D-214ENST00000636627 P3H3Q8IVL6 736 aa16.69■□□□□ 0.26
CACNA1D-214ENST00000636627 KIF21BO75037 1637 aa16.69■□□□□ 0.26
CACNA1D-214ENST00000636627 TONSLQ96HA7 1378 aa16.68■□□□□ 0.26
CACNA1D-214ENST00000636627 RAPGEF2Q9Y4G8 1499 aa16.67■□□□□ 0.26
CACNA1D-214ENST00000636627 TRIM52Q96A61 297 aa16.66■□□□□ 0.26
CACNA1D-214ENST00000636627 FHAD1B1AJZ9 1412 aa16.66■□□□□ 0.26
CACNA1D-214ENST00000636627 TIMELESSQ9UNS1 1208 aa16.63■□□□□ 0.25
CACNA1D-214ENST00000636627 DDX10Q13206 875 aaKnown RBP16.6■□□□□ 0.25
CACNA1D-214ENST00000636627 MTUS2Q5JR59 1369 aa16.58■□□□□ 0.25
CACNA1D-214ENST00000636627 CARMIL1Q5VZK9 1371 aa16.57■□□□□ 0.24
CACNA1D-214ENST00000636627 CUX2O14529 1486 aa16.57■□□□□ 0.24
CACNA1D-214ENST00000636627 BCANQ96GW7 911 aa16.54■□□□□ 0.24
CACNA1D-214ENST00000636627 KANK4Q5T7N3 995 aaPredicted RBP16.54■□□□□ 0.24
CACNA1D-214ENST00000636627 ERICH3Q5RHP9 1530 aa16.53■□□□□ 0.24
CACNA1D-214ENST00000636627 SETD5Q9C0A6 1442 aa16.52■□□□□ 0.23
CACNA1D-214ENST00000636627 CDK11AQ9UQ88 783 aaPredicted RBP16.51■□□□□ 0.23
CACNA1D-214ENST00000636627 SYNJ1O43426 1573 aa16.51■□□□□ 0.23
CACNA1D-214ENST00000636627 EIF4G1Q04637 1599 aaKnown RBP16.51■□□□□ 0.23
CACNA1D-214ENST00000636627 FKBP8Q14318 412 aa16.51■□□□□ 0.23
CACNA1D-214ENST00000636627 DHX57Q6P158 1386 aaKnown RBP16.51■□□□□ 0.23
CACNA1D-214ENST00000636627 PEG3Q9GZU2 1588 aa16.47■□□□□ 0.23
CACNA1D-214ENST00000636627 POLR3GLQ9BT43 218 aa16.47■□□□□ 0.23
CACNA1D-214ENST00000636627 TOP2BQ02880 1626 aa16.44■□□□□ 0.22
CACNA1D-214ENST00000636627 RAB3GAP2Q9H2M9 1393 aa16.44■□□□□ 0.22
CACNA1D-214ENST00000636627 NCAPD3P42695 1498 aa16.43■□□□□ 0.22
CACNA1D-214ENST00000636627 ARHGAP35Q9NRY4 1499 aa16.42■□□□□ 0.22
CACNA1D-214ENST00000636627 SUPT16HQ9Y5B9 1047 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms