RNA–Protein interactions for RNA: ENST00000636292.1

CHRNA7-213, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 4,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-213ENST00000636292 NISCHQ9Y2I1 1504 aa25.31■■□□□ 1.64
CHRNA7-213ENST00000636292 DCAF8L2P0C7V8 631 aa24.89■■□□□ 1.58
CHRNA7-213ENST00000636292 SHROOM4Q9ULL8 1493 aa23.3■■□□□ 1.32
CHRNA7-213ENST00000636292 SUPT5HO00267 1087 aaKnown RBP23.26■■□□□ 1.31
CHRNA7-213ENST00000636292 EHMT2Q96KQ7 1210 aa22.16■■□□□ 1.14
CHRNA7-213ENST00000636292 ABCC9O60706 1549 aa21.92■■□□□ 1.1
CHRNA7-213ENST00000636292 FAM9AQ8IZU1 332 aaPredicted RBP21.83■■□□□ 1.09
CHRNA7-213ENST00000636292 TRIM41Q8WV44 630 aa21.64■■□□□ 1.05
CHRNA7-213ENST00000636292 APLP2Q06481 763 aa21.6■■□□□ 1.05
CHRNA7-213ENST00000636292 PABPN1Q86U42 306 aaKnown RBP eCLIP21.49■■□□□ 1.03
CHRNA7-213ENST00000636292 RANGAP1P46060 587 aaPredicted RBP21.42■■□□□ 1.02
CHRNA7-213ENST00000636292 TTBK1Q5TCY1 1321 aaPredicted RBP21.28■■□□□ 1
CHRNA7-213ENST00000636292 UBTFP17480 764 aaKnown RBP21.26■□□□□ 0.99
CHRNA7-213ENST00000636292 ATP1B4Q9UN42 357 aaPredicted RBP21.16■□□□□ 0.98
CHRNA7-213ENST00000636292 CCDC180Q9P1Z9 1646 aa21.09■□□□□ 0.97
CHRNA7-213ENST00000636292 ZCCHC6Q5VYS8 1495 aaKnown RBP20.96■□□□□ 0.95
CHRNA7-213ENST00000636292 PCGF6Q9BYE7 350 aa20.93■□□□□ 0.94
CHRNA7-213ENST00000636292 CHIC1Q5VXU3 224 aa20.89■□□□□ 0.94
CHRNA7-213ENST00000636292 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
CHRNA7-213ENST00000636292 LOC105371045A0A1W2PR82 267 aa20.67■□□□□ 0.9
CHRNA7-213ENST00000636292 PPARGC1BQ86YN6 1023 aaKnown RBP20.67■□□□□ 0.9
CHRNA7-213ENST00000636292 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.62■□□□□ 0.89
CHRNA7-213ENST00000636292 HNRNPUL2Q1KMD3 747 aaKnown RBP20.62■□□□□ 0.89
CHRNA7-213ENST00000636292 RB1CC1Q8TDY2 1594 aa20.59■□□□□ 0.89
CHRNA7-213ENST00000636292 CCER1Q8TC90 406 aaPredicted RBP20.57■□□□□ 0.88
CHRNA7-213ENST00000636292 NACADO15069 1562 aa20.44■□□□□ 0.86
CHRNA7-213ENST00000636292 ITGAEP38570 1179 aa20.37■□□□□ 0.85
CHRNA7-213ENST00000636292 MYT1LQ9UL68 1186 aa20.37■□□□□ 0.85
CHRNA7-213ENST00000636292 ZEB1P37275 1124 aaPredicted RBP20.36■□□□□ 0.85
CHRNA7-213ENST00000636292 FBLN2P98095 1184 aa20.36■□□□□ 0.85
CHRNA7-213ENST00000636292 TRIM26Q12899 539 aaPredicted RBP20.31■□□□□ 0.84
CHRNA7-213ENST00000636292 CSRNP3Q8WYN3 585 aa20.16■□□□□ 0.82
CHRNA7-213ENST00000636292 DCAF1Q9Y4B6 1507 aa20.14■□□□□ 0.81
CHRNA7-213ENST00000636292 RSF1Q96T23 1441 aaPredicted RBP20.06■□□□□ 0.8
CHRNA7-213ENST00000636292 P3H3Q8IVL6 736 aa20.02■□□□□ 0.8
CHRNA7-213ENST00000636292 FAM50AQ14320 339 aaKnown RBP20.01■□□□□ 0.79
CHRNA7-213ENST00000636292 BAZ1BQ9UIG0 1483 aaKnown RBP19.95■□□□□ 0.78
CHRNA7-213ENST00000636292 ARID3CA6NKF2 412 aa19.91■□□□□ 0.78
CHRNA7-213ENST00000636292 PELP1Q8IZL8 1130 aaKnown RBP19.9■□□□□ 0.78
CHRNA7-213ENST00000636292 CECR2Q9BXF3 1484 aa19.87■□□□□ 0.77
CHRNA7-213ENST00000636292 BAZ1AQ9NRL2 1556 aaPredicted RBP19.85■□□□□ 0.77
CHRNA7-213ENST00000636292 TRIM52Q96A61 297 aa19.79■□□□□ 0.76
CHRNA7-213ENST00000636292 POLR3GLQ9BT43 218 aa19.77■□□□□ 0.75
CHRNA7-213ENST00000636292 CENPBP07199 599 aaPredicted RBP19.74■□□□□ 0.75
CHRNA7-213ENST00000636292 CDK11AQ9UQ88 783 aaPredicted RBP19.72■□□□□ 0.75
CHRNA7-213ENST00000636292 CHMP7Q8WUX9 453 aaPredicted RBP19.71■□□□□ 0.75
CHRNA7-213ENST00000636292 MYO15BQ96JP2 1530 aa19.7■□□□□ 0.74
CHRNA7-213ENST00000636292 HRCP23327 699 aa19.68■□□□□ 0.74
CHRNA7-213ENST00000636292 WRNQ14191 1432 aaPredicted RBP eCLIP19.65■□□□□ 0.74
CHRNA7-213ENST00000636292 ZNF777Q9ULD5 760 aaPredicted RBP19.64■□□□□ 0.74
CHRNA7-213ENST00000636292 YTHDC1Q96MU7 727 aaKnown RBP19.61■□□□□ 0.73
CHRNA7-213ENST00000636292 NPM1P06748 294 aaKnown RBP eCLIP19.61■□□□□ 0.73
CHRNA7-213ENST00000636292 ERCC6Q03468 1493 aa19.6■□□□□ 0.73
CHRNA7-213ENST00000636292 MROH2BQ7Z745 1585 aa19.59■□□□□ 0.73
CHRNA7-213ENST00000636292 NEUROD1Q13562 356 aa19.57■□□□□ 0.72
CHRNA7-213ENST00000636292 CNGB1Q14028 1251 aaPredicted RBP19.53■□□□□ 0.72
CHRNA7-213ENST00000636292 SMARCA2P51531 1590 aa19.49■□□□□ 0.71
CHRNA7-213ENST00000636292 EEA1Q15075 1411 aa19.48■□□□□ 0.71
CHRNA7-213ENST00000636292 KIF27Q86VH2 1401 aa19.47■□□□□ 0.71
CHRNA7-213ENST00000636292 SLC4A1APQ9BWU0 796 aaKnown RBP19.47■□□□□ 0.71
CHRNA7-213ENST00000636292 ZNF326Q5BKZ1 582 aaKnown RBP19.44■□□□□ 0.7
CHRNA7-213ENST00000636292 CLIP1P30622 1438 aa19.42■□□□□ 0.7
CHRNA7-213ENST00000636292 NEFLP07196 543 aa19.41■□□□□ 0.7
CHRNA7-213ENST00000636292 CCDC88BA6NC98 1476 aa19.41■□□□□ 0.7
CHRNA7-213ENST00000636292 GOLGA3Q08378 1498 aa19.36■□□□□ 0.69
CHRNA7-213ENST00000636292 MTUS2Q5JR59 1369 aa19.35■□□□□ 0.69
CHRNA7-213ENST00000636292 PDS5BQ9NTI5 1447 aa19.32■□□□□ 0.68
CHRNA7-213ENST00000636292 ESF1Q9H501 851 aaKnown RBP19.3■□□□□ 0.68
CHRNA7-213ENST00000636292 ATAD2BQ9ULI0 1458 aa19.29■□□□□ 0.68
CHRNA7-213ENST00000636292 WIZO95785 1651 aa19.28■□□□□ 0.68
CHRNA7-213ENST00000636292 CHIC2Q9UKJ5 165 aa19.27■□□□□ 0.68
CHRNA7-213ENST00000636292 CUX2O14529 1486 aa19.26■□□□□ 0.67
CHRNA7-213ENST00000636292 CEP164Q9UPV0 1460 aa19.26■□□□□ 0.67
CHRNA7-213ENST00000636292 CEP162Q5TB80 1403 aa19.25■□□□□ 0.67
CHRNA7-213ENST00000636292 BCANQ96GW7 911 aa19.25■□□□□ 0.67
CHRNA7-213ENST00000636292 KCNH8Q96L42 1107 aa19.25■□□□□ 0.67
CHRNA7-213ENST00000636292 TOP2AP11388 1531 aaKnown RBP19.25■□□□□ 0.67
CHRNA7-213ENST00000636292 TSPY4P0CV99 314 aa19.23■□□□□ 0.67
CHRNA7-213ENST00000636292 TSPY10P0CW01 314 aa19.23■□□□□ 0.67
CHRNA7-213ENST00000636292 PLEKHD1A6NEE1 506 aa19.23■□□□□ 0.67
CHRNA7-213ENST00000636292 CADPSQ9ULU8 1353 aa19.23■□□□□ 0.67
CHRNA7-213ENST00000636292 DIEXFQ68CQ4 756 aaKnown RBP19.21■□□□□ 0.67
CHRNA7-213ENST00000636292 SMARCA4P51532 1647 aa19.2■□□□□ 0.66
CHRNA7-213ENST00000636292 CARMIL1Q5VZK9 1371 aa19.2■□□□□ 0.66
CHRNA7-213ENST00000636292 TNIKQ9UKE5 1360 aa19.19■□□□□ 0.66
CHRNA7-213ENST00000636292 SOGA1O94964 1423 aa19.18■□□□□ 0.66
CHRNA7-213ENST00000636292 ABCC8Q09428 1581 aa19.16■□□□□ 0.66
CHRNA7-213ENST00000636292 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.16■□□□□ 0.66
CHRNA7-213ENST00000636292 CHGAP10645 457 aaKnown RBP19.14■□□□□ 0.66
CHRNA7-213ENST00000636292 PLPPR3Q6T4P5 718 aa19.14■□□□□ 0.66
CHRNA7-213ENST00000636292 TDRD9Q8NDG6 1382 aaKnown RBP19.13■□□□□ 0.65
CHRNA7-213ENST00000636292 STAG3Q9UJ98 1225 aa19.11■□□□□ 0.65
CHRNA7-213ENST00000636292 EIF4G1Q04637 1599 aaKnown RBP19.06■□□□□ 0.64
CHRNA7-213ENST00000636292 TONSLQ96HA7 1378 aa19.05■□□□□ 0.64
CHRNA7-213ENST00000636292 CFDP1Q9UEE9 299 aaPredicted RBP19.03■□□□□ 0.64
CHRNA7-213ENST00000636292 RRP7BPQ9NSQ0 103 aa19.02■□□□□ 0.64
CHRNA7-213ENST00000636292 ZNF316A6NFI3 1004 aaPredicted RBP19.01■□□□□ 0.63
CHRNA7-213ENST00000636292 ANP32CO43423 234 aa19.01■□□□□ 0.63
CHRNA7-213ENST00000636292 ERICH6Q7L0X2 663 aa18.96■□□□□ 0.63
CHRNA7-213ENST00000636292 FANCD2Q9BXW9 1451 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms