RNA–Protein interactions for RNA: ENST00000636184.1

CHRNA7-210, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 3,426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-210ENST00000636184 NISCHQ9Y2I1 1504 aa17.03■□□□□ 0.32
CHRNA7-210ENST00000636184 PELP1Q8IZL8 1130 aaKnown RBP15.93■□□□□ 0.14
CHRNA7-210ENST00000636184 MYT1Q01538 1121 aa15.67■□□□□ 0.1
CHRNA7-210ENST00000636184 DCAF8L2P0C7V8 631 aa15.55■□□□□ 0.08
CHRNA7-210ENST00000636184 PRKCSHP14314 528 aaPredicted RBP15.15■□□□□ 0.02
CHRNA7-210ENST00000636184 TTBK1Q5TCY1 1321 aaPredicted RBP15.12■□□□□ 0.01
CHRNA7-210ENST00000636184 SHROOM4Q9ULL8 1493 aa14.87□□□□□ -0.03
CHRNA7-210ENST00000636184 ABCC9O60706 1549 aa14.86□□□□□ -0.03
CHRNA7-210ENST00000636184 SLC24A1O60721 1099 aa14.74□□□□□ -0.05
CHRNA7-210ENST00000636184 APLP2Q06481 763 aa14.69□□□□□ -0.06
CHRNA7-210ENST00000636184 BCL11AQ9H165 835 aa14.62□□□□□ -0.07
CHRNA7-210ENST00000636184 ERICH6Q7L0X2 663 aa14.6□□□□□ -0.07
CHRNA7-210ENST00000636184 HRCP23327 699 aa14.6□□□□□ -0.07
CHRNA7-210ENST00000636184 SCAF1Q9H7N4 1312 aaKnown RBP14.58□□□□□ -0.08
CHRNA7-210ENST00000636184 FAM9AQ8IZU1 332 aaPredicted RBP14.49□□□□□ -0.09
CHRNA7-210ENST00000636184 CCDC180Q9P1Z9 1646 aa14.44□□□□□ -0.1
CHRNA7-210ENST00000636184 SUPT5HO00267 1087 aaKnown RBP14.33□□□□□ -0.12
CHRNA7-210ENST00000636184 PABPN1Q86U42 306 aaKnown RBP eCLIP14.33□□□□□ -0.12
CHRNA7-210ENST00000636184 PPARGC1BQ86YN6 1023 aaKnown RBP14.31□□□□□ -0.12
CHRNA7-210ENST00000636184 ZCCHC6Q5VYS8 1495 aaKnown RBP14.15□□□□□ -0.14
CHRNA7-210ENST00000636184 DAXXQ9UER7 740 aaPredicted RBP14.05□□□□□ -0.16
CHRNA7-210ENST00000636184 CHIC1Q5VXU3 224 aa14.02□□□□□ -0.17
CHRNA7-210ENST00000636184 SCRIBQ14160 1630 aa14□□□□□ -0.17
CHRNA7-210ENST00000636184 CENPBP07199 599 aaPredicted RBP13.96□□□□□ -0.18
CHRNA7-210ENST00000636184 EIF5BO60841 1220 aaKnown RBP13.86□□□□□ -0.19
CHRNA7-210ENST00000636184 RB1CC1Q8TDY2 1594 aa13.81□□□□□ -0.2
CHRNA7-210ENST00000636184 ACIN1Q9UKV3 1341 aaKnown RBP13.77□□□□□ -0.21
CHRNA7-210ENST00000636184 NACADO15069 1562 aa13.75□□□□□ -0.21
CHRNA7-210ENST00000636184 GTF3C3Q9Y5Q9 886 aa13.74□□□□□ -0.21
CHRNA7-210ENST00000636184 PLEKHG5O94827 1062 aa13.74□□□□□ -0.21
CHRNA7-210ENST00000636184 AEBP2Q6ZN18 517 aaPredicted RBP13.72□□□□□ -0.21
CHRNA7-210ENST00000636184 NEUROD1Q13562 356 aa13.71□□□□□ -0.22
CHRNA7-210ENST00000636184 ANP32EQ9BTT0 268 aa13.7□□□□□ -0.22
CHRNA7-210ENST00000636184 PCGF6Q9BYE7 350 aa13.68□□□□□ -0.22
CHRNA7-210ENST00000636184 CSRNP3Q8WYN3 585 aa13.66□□□□□ -0.22
CHRNA7-210ENST00000636184 EHMT2Q96KQ7 1210 aa13.62□□□□□ -0.23
CHRNA7-210ENST00000636184 ANO8Q9HCE9 1232 aaPredicted RBP13.61□□□□□ -0.23
CHRNA7-210ENST00000636184 DCAF1Q9Y4B6 1507 aa13.61□□□□□ -0.23
CHRNA7-210ENST00000636184 CECR2Q9BXF3 1484 aa13.58□□□□□ -0.24
CHRNA7-210ENST00000636184 UBE2Q2Q8WVN8 375 aa13.53□□□□□ -0.24
CHRNA7-210ENST00000636184 MYO15BQ96JP2 1530 aa13.41□□□□□ -0.26
CHRNA7-210ENST00000636184 DNAJC5BQ9UF47 199 aa13.4□□□□□ -0.26
CHRNA7-210ENST00000636184 PODXL2Q9NZ53 605 aa13.38□□□□□ -0.27
CHRNA7-210ENST00000636184 RSF1Q96T23 1441 aaPredicted RBP13.35□□□□□ -0.27
CHRNA7-210ENST00000636184 MROH2BQ7Z745 1585 aa13.33□□□□□ -0.28
CHRNA7-210ENST00000636184 BICRAQ9NZM4 1560 aa13.31□□□□□ -0.28
CHRNA7-210ENST00000636184 UNC13AQ9UPW8 1703 aa13.3□□□□□ -0.28
CHRNA7-210ENST00000636184 ZEB1P37275 1124 aaPredicted RBP13.28□□□□□ -0.28
CHRNA7-210ENST00000636184 PKNOX2Q96KN3 472 aa13.26□□□□□ -0.29
CHRNA7-210ENST00000636184 SALL2Q9Y467 1007 aaPredicted RBP13.25□□□□□ -0.29
CHRNA7-210ENST00000636184 CCDC136Q96JN2 1154 aa13.24□□□□□ -0.29
CHRNA7-210ENST00000636184 TRIM41Q8WV44 630 aa13.2□□□□□ -0.3
CHRNA7-210ENST00000636184 WIZO95785 1651 aa13.18□□□□□ -0.3
CHRNA7-210ENST00000636184 RANGAP1P46060 587 aaPredicted RBP13.16□□□□□ -0.3
CHRNA7-210ENST00000636184 BAZ1AQ9NRL2 1556 aaPredicted RBP13.13□□□□□ -0.31
CHRNA7-210ENST00000636184 BAZ1BQ9UIG0 1483 aaKnown RBP13.1□□□□□ -0.31
CHRNA7-210ENST00000636184 EIF4G1Q04637 1599 aaKnown RBP13.09□□□□□ -0.31
CHRNA7-210ENST00000636184 TSHZ2Q9NRE2 1034 aa13.07□□□□□ -0.32
CHRNA7-210ENST00000636184 SMARCA4P51532 1647 aa13.06□□□□□ -0.32
CHRNA7-210ENST00000636184 ATAD2BQ9ULI0 1458 aa13.06□□□□□ -0.32
CHRNA7-210ENST00000636184 LOC105371045A0A1W2PR82 267 aa13.04□□□□□ -0.32
CHRNA7-210ENST00000636184 CC2D2AQ9P2K1 1620 aa13□□□□□ -0.33
CHRNA7-210ENST00000636184 KLHL34Q8N239 644 aa13□□□□□ -0.33
CHRNA7-210ENST00000636184 CCDC88BA6NC98 1476 aa12.97□□□□□ -0.33
CHRNA7-210ENST00000636184 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.94□□□□□ -0.34
CHRNA7-210ENST00000636184 NCBP3Q53F19 620 aaKnown RBP12.94□□□□□ -0.34
CHRNA7-210ENST00000636184 SMARCA2P51531 1590 aa12.89□□□□□ -0.35
CHRNA7-210ENST00000636184 ERICH6BQ5W0A0 696 aa12.88□□□□□ -0.35
CHRNA7-210ENST00000636184 NESP48681 1621 aa12.88□□□□□ -0.35
CHRNA7-210ENST00000636184 PDIA4P13667 645 aaKnown RBP12.86□□□□□ -0.35
CHRNA7-210ENST00000636184 PDE4CQ08493 712 aa12.86□□□□□ -0.35
CHRNA7-210ENST00000636184 UBTFP17480 764 aaKnown RBP12.84□□□□□ -0.35
CHRNA7-210ENST00000636184 FBLN2P98095 1184 aa12.84□□□□□ -0.35
CHRNA7-210ENST00000636184 TRIM26Q12899 539 aaPredicted RBP12.84□□□□□ -0.35
CHRNA7-210ENST00000636184 NCAPD3P42695 1498 aa12.83□□□□□ -0.36
CHRNA7-210ENST00000636184 NEFLP07196 543 aa12.82□□□□□ -0.36
CHRNA7-210ENST00000636184 DIEXFQ68CQ4 756 aaKnown RBP12.82□□□□□ -0.36
CHRNA7-210ENST00000636184 TOP2AP11388 1531 aaKnown RBP12.82□□□□□ -0.36
CHRNA7-210ENST00000636184 ABCC8Q09428 1581 aa12.81□□□□□ -0.36
CHRNA7-210ENST00000636184 DEKP35659 375 aaKnown RBP12.8□□□□□ -0.36
CHRNA7-210ENST00000636184 YTHDC1Q96MU7 727 aaKnown RBP12.79□□□□□ -0.36
CHRNA7-210ENST00000636184 ERCC6Q03468 1493 aa12.77□□□□□ -0.37
CHRNA7-210ENST00000636184 SUPT16HQ9Y5B9 1047 aaKnown RBP12.76□□□□□ -0.37
CHRNA7-210ENST00000636184 CADPSQ9ULU8 1353 aa12.75□□□□□ -0.37
CHRNA7-210ENST00000636184 FGD1P98174 961 aa12.74□□□□□ -0.37
CHRNA7-210ENST00000636184 BCL11BQ9C0K0 894 aaPredicted RBP12.74□□□□□ -0.37
CHRNA7-210ENST00000636184 A0A0U1RQG5 324 aaPredicted RBP12.73□□□□□ -0.37
CHRNA7-210ENST00000636184 ATP1B4Q9UN42 357 aaPredicted RBP12.72□□□□□ -0.37
CHRNA7-210ENST00000636184 ARXQ96QS3 562 aa12.71□□□□□ -0.38
CHRNA7-210ENST00000636184 MSH5O43196 834 aa12.7□□□□□ -0.38
CHRNA7-210ENST00000636184 TIMELESSQ9UNS1 1208 aa12.7□□□□□ -0.38
CHRNA7-210ENST00000636184 WRNQ14191 1432 aaPredicted RBP eCLIP12.67□□□□□ -0.38
CHRNA7-210ENST00000636184 PHF23Q9BUL5 403 aaPredicted RBP12.67□□□□□ -0.38
CHRNA7-210ENST00000636184 ZMYND15Q9H091 742 aa12.67□□□□□ -0.38
CHRNA7-210ENST00000636184 MYT1LQ9UL68 1186 aa12.67□□□□□ -0.38
CHRNA7-210ENST00000636184 P3H3Q8IVL6 736 aa12.65□□□□□ -0.38
CHRNA7-210ENST00000636184 PLPPR3Q6T4P5 718 aa12.64□□□□□ -0.39
CHRNA7-210ENST00000636184 RTN4Q9NQC3 1192 aaKnown RBP12.64□□□□□ -0.39
CHRNA7-210ENST00000636184 IL27Q8NEV9 243 aa12.64□□□□□ -0.39
CHRNA7-210ENST00000636184 RBM19Q9Y4C8 960 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms