RNA–Protein interactions for RNA: ENST00000622990.1

PCDHB18P-203, Transcript of protocadherin beta 18 pseudogene, humanhuman

TSL 4

Gene PCDHB18P, Length 549 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-203ENST00000622990 AEBP2Q6ZN18 517 aaPredicted RBP26.66■■□□□ 1.86
PCDHB18P-203ENST00000622990 CHIC1Q5VXU3 224 aa25.4■■□□□ 1.66
PCDHB18P-203ENST00000622990 SENP3Q9H4L4 574 aaPredicted RBP22.78■■□□□ 1.24
PCDHB18P-203ENST00000622990 PHF23Q9BUL5 403 aaPredicted RBP22.48■■□□□ 1.19
PCDHB18P-203ENST00000622990 FOXD1Q16676 465 aa21.2■□□□□ 0.98
PCDHB18P-203ENST00000622990 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
PCDHB18P-203ENST00000622990 MSH5O43196 834 aa19.86■□□□□ 0.77
PCDHB18P-203ENST00000622990 PIAS4Q8N2W9 510 aaPredicted RBP19.86■□□□□ 0.77
PCDHB18P-203ENST00000622990 PPP6R1Q9UPN7 881 aa19.85■□□□□ 0.77
PCDHB18P-203ENST00000622990 ADRA2BP18089 450 aa19.81■□□□□ 0.76
PCDHB18P-203ENST00000622990 POTEDQ86YR6 584 aa19.27■□□□□ 0.68
PCDHB18P-203ENST00000622990 MAPK8IP2Q13387 824 aaPredicted RBP18.17■□□□□ 0.5
PCDHB18P-203ENST00000622990 SCAF1Q9H7N4 1312 aaKnown RBP18.17■□□□□ 0.5
PCDHB18P-203ENST00000622990 DMRT2Q9Y5R5 561 aa18.06■□□□□ 0.48
PCDHB18P-203ENST00000622990 PPP4R3CPQ6ZMV5 832 aa17.83■□□□□ 0.44
PCDHB18P-203ENST00000622990 NISCHQ9Y2I1 1504 aa17.57■□□□□ 0.4
PCDHB18P-203ENST00000622990 CNKSR2Q8WXI2 1034 aa17.49■□□□□ 0.39
PCDHB18P-203ENST00000622990 HOXD11P31277 338 aaPredicted RBP17.4■□□□□ 0.38
PCDHB18P-203ENST00000622990 DCAF8L1A6NGE4 600 aa17.37■□□□□ 0.37
PCDHB18P-203ENST00000622990 RNF216Q9NWF9 866 aaPredicted RBP17.3■□□□□ 0.36
PCDHB18P-203ENST00000622990 NCBP3Q53F19 620 aaKnown RBP17.18■□□□□ 0.34
PCDHB18P-203ENST00000622990 CACNB1Q02641 598 aaPredicted RBP17.02■□□□□ 0.32
PCDHB18P-203ENST00000622990 RNF39Q9H2S5 420 aa16.91■□□□□ 0.3
PCDHB18P-203ENST00000622990 NPM3O75607 178 aaKnown RBP16.9■□□□□ 0.3
PCDHB18P-203ENST00000622990 DNAJC5BQ9UF47 199 aa16.79■□□□□ 0.28
PCDHB18P-203ENST00000622990 KCNA4P22459 653 aa16.77■□□□□ 0.28
PCDHB18P-203ENST00000622990 C1QBPQ07021 282 aaKnown RBP16.7■□□□□ 0.26
PCDHB18P-203ENST00000622990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.63■□□□□ 0.25
PCDHB18P-203ENST00000622990 U3KPZ7 1027 aaPredicted RBP16.25■□□□□ 0.19
PCDHB18P-203ENST00000622990 ABCC9O60706 1549 aa16.17■□□□□ 0.18
PCDHB18P-203ENST00000622990 SLC4A2P04920 1241 aa16.1■□□□□ 0.17
PCDHB18P-203ENST00000622990 CAPN15O75808 1086 aa16.01■□□□□ 0.15
PCDHB18P-203ENST00000622990 SPINK5Q9NQ38 1064 aaPredicted RBP16■□□□□ 0.15
PCDHB18P-203ENST00000622990 CCDC180Q9P1Z9 1646 aa15.9■□□□□ 0.14
PCDHB18P-203ENST00000622990 DSG3P32926 999 aa15.87■□□□□ 0.13
PCDHB18P-203ENST00000622990 APLP2Q06481 763 aa15.86■□□□□ 0.13
PCDHB18P-203ENST00000622990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.85■□□□□ 0.13
PCDHB18P-203ENST00000622990 HNRNPUL2Q1KMD3 747 aaKnown RBP15.85■□□□□ 0.13
PCDHB18P-203ENST00000622990 SLC4A1APQ9BWU0 796 aaKnown RBP15.84■□□□□ 0.13
PCDHB18P-203ENST00000622990 TRHP20396 242 aaPredicted RBP15.76■□□□□ 0.11
PCDHB18P-203ENST00000622990 SAMD1Q6SPF0 538 aaPredicted RBP15.75■□□□□ 0.11
PCDHB18P-203ENST00000622990 ZNF219Q9P2Y4 722 aaPredicted RBP15.73■□□□□ 0.11
PCDHB18P-203ENST00000622990 MYCNP04198 464 aaPredicted RBP15.65■□□□□ 0.1
PCDHB18P-203ENST00000622990 ABCB7O75027 752 aa15.63■□□□□ 0.09
PCDHB18P-203ENST00000622990 FOXD4L1Q9NU39 408 aa15.52■□□□□ 0.08
PCDHB18P-203ENST00000622990 ZBTB22O15209 634 aa15.46■□□□□ 0.07
PCDHB18P-203ENST00000622990 POLA2Q14181 598 aa15.33■□□□□ 0.04
PCDHB18P-203ENST00000622990 RB1CC1Q8TDY2 1594 aa15.27■□□□□ 0.03
PCDHB18P-203ENST00000622990 ATF5Q9Y2D1 282 aaPredicted RBP15.25■□□□□ 0.03
PCDHB18P-203ENST00000622990 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
PCDHB18P-203ENST00000622990 POTEHQ6S545 545 aa15.13■□□□□ 0.01
PCDHB18P-203ENST00000622990 NACADO15069 1562 aa15.11■□□□□ 0.01
PCDHB18P-203ENST00000622990 ZBTB12Q9Y330 459 aaPredicted RBP15.05■□□□□ -0
PCDHB18P-203ENST00000622990 ATXN8OSP0DMR3 200 aa15.02■□□□□ -0
PCDHB18P-203ENST00000622990 PABPN1Q86U42 306 aaKnown RBP eCLIP15.01□□□□□ -0.01
PCDHB18P-203ENST00000622990 UNC13AQ9UPW8 1703 aa14.98□□□□□ -0.01
PCDHB18P-203ENST00000622990 CSRNP3Q8WYN3 585 aa14.95□□□□□ -0.02
PCDHB18P-203ENST00000622990 BICRAQ9NZM4 1560 aa14.92□□□□□ -0.02
PCDHB18P-203ENST00000622990 EHMT2Q96KQ7 1210 aa14.87□□□□□ -0.03
PCDHB18P-203ENST00000622990 MYO15BQ96JP2 1530 aa14.85□□□□□ -0.03
PCDHB18P-203ENST00000622990 OSCARQ8IYS5 282 aa14.84□□□□□ -0.03
PCDHB18P-203ENST00000622990 DCAF8L2P0C7V8 631 aa14.83□□□□□ -0.04
PCDHB18P-203ENST00000622990 AKT1S1Q96B36 256 aa14.82□□□□□ -0.04
PCDHB18P-203ENST00000622990 CHRDL2Q6WN34 429 aa14.8□□□□□ -0.04
PCDHB18P-203ENST00000622990 FBLN2P98095 1184 aa14.71□□□□□ -0.05
PCDHB18P-203ENST00000622990 REM2Q8IYK8 340 aaPredicted RBP14.67□□□□□ -0.06
PCDHB18P-203ENST00000622990 SHROOM4Q9ULL8 1493 aa14.64□□□□□ -0.07
PCDHB18P-203ENST00000622990 CC2D2AQ9P2K1 1620 aa14.63□□□□□ -0.07
PCDHB18P-203ENST00000622990 CECR2Q9BXF3 1484 aa14.62□□□□□ -0.07
PCDHB18P-203ENST00000622990 SPDYE2BA6NHP3 402 aa14.57□□□□□ -0.08
PCDHB18P-203ENST00000622990 SPDYE6P0CI01 402 aa14.57□□□□□ -0.08
PCDHB18P-203ENST00000622990 SPDYE2Q495Y8 402 aa14.57□□□□□ -0.08
PCDHB18P-203ENST00000622990 MKRN4PQ13434 485 aaPredicted RBP14.55□□□□□ -0.08
PCDHB18P-203ENST00000622990 DNAJC5Q9H3Z4 198 aa14.54□□□□□ -0.08
PCDHB18P-203ENST00000622990 DCAF1Q9Y4B6 1507 aa14.53□□□□□ -0.08
PCDHB18P-203ENST00000622990 EIF4G1Q04637 1599 aaKnown RBP14.51□□□□□ -0.09
PCDHB18P-203ENST00000622990 PITPNM1O00562 1244 aa14.51□□□□□ -0.09
PCDHB18P-203ENST00000622990 ZCCHC6Q5VYS8 1495 aaKnown RBP14.48□□□□□ -0.09
PCDHB18P-203ENST00000622990 PIP4P2Q8N4L2 257 aa14.45□□□□□ -0.1
PCDHB18P-203ENST00000622990 ZNF692Q9BU19 519 aaPredicted RBP14.42□□□□□ -0.1
PCDHB18P-203ENST00000622990 SCRIBQ14160 1630 aa14.4□□□□□ -0.1
PCDHB18P-203ENST00000622990 FXR2P51116 673 aaKnown RBP eCLIP14.37□□□□□ -0.11
PCDHB18P-203ENST00000622990 SSUH2Q9Y2M2 353 aa14.36□□□□□ -0.11
PCDHB18P-203ENST00000622990 SPDYE1Q8NFV5 336 aaPredicted RBP14.32□□□□□ -0.12
PCDHB18P-203ENST00000622990 CLEC11AQ9Y240 323 aa14.31□□□□□ -0.12
PCDHB18P-203ENST00000622990 HAX1O00165 279 aa14.2□□□□□ -0.14
PCDHB18P-203ENST00000622990 SP7Q8TDD2 431 aaPredicted RBP14.2□□□□□ -0.14
PCDHB18P-203ENST00000622990 PRKAR2AP13861 404 aaKnown RBP14.16□□□□□ -0.14
PCDHB18P-203ENST00000622990 CUX2O14529 1486 aa14.11□□□□□ -0.15
PCDHB18P-203ENST00000622990 PRR29P0C7W0 189 aa14.07□□□□□ -0.16
PCDHB18P-203ENST00000622990 CHADLQ6NUI6 762 aa14□□□□□ -0.17
PCDHB18P-203ENST00000622990 NCAPD3P42695 1498 aa13.99□□□□□ -0.17
PCDHB18P-203ENST00000622990 EVX2Q03828 476 aa13.98□□□□□ -0.17
PCDHB18P-203ENST00000622990 SPDYE4A6NLX3 237 aa13.93□□□□□ -0.18
PCDHB18P-203ENST00000622990 ERCC6Q03468 1493 aa13.93□□□□□ -0.18
PCDHB18P-203ENST00000622990 C19orf67A6NJJ6 358 aa13.91□□□□□ -0.18
PCDHB18P-203ENST00000622990 ATAD2BQ9ULI0 1458 aa13.87□□□□□ -0.19
PCDHB18P-203ENST00000622990 STAG3Q9UJ98 1225 aa13.84□□□□□ -0.19
PCDHB18P-203ENST00000622990 NESP48681 1621 aa13.83□□□□□ -0.2
PCDHB18P-203ENST00000622990 HMGXB3Q12766 1538 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 195 ms