RNA–Protein interactions for RNA: ENST00000608007.1

C1orf61-226, Transcript of chromosome 1 open reading frame 61, humanhuman

TSL 1 (best)

Gene C1orf61, Length 3,138 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf61-226ENST00000608007 NISCHQ9Y2I1 1504 aa13.42□□□□□ -0.26
C1orf61-226ENST00000608007 HRCP23327 699 aa12.05□□□□□ -0.48
C1orf61-226ENST00000608007 CHIC1Q5VXU3 224 aa12.01□□□□□ -0.49
C1orf61-226ENST00000608007 SLC24A1O60721 1099 aa11.88□□□□□ -0.51
C1orf61-226ENST00000608007 PPARGC1BQ86YN6 1023 aaKnown RBP11.86□□□□□ -0.51
C1orf61-226ENST00000608007 SHROOM4Q9ULL8 1493 aa11.79□□□□□ -0.52
C1orf61-226ENST00000608007 PELP1Q8IZL8 1130 aaKnown RBP11.78□□□□□ -0.52
C1orf61-226ENST00000608007 PCGF6Q9BYE7 350 aa11.7□□□□□ -0.54
C1orf61-226ENST00000608007 MYO15BQ96JP2 1530 aa11.67□□□□□ -0.54
C1orf61-226ENST00000608007 SUPT5HO00267 1087 aaKnown RBP11.6□□□□□ -0.55
C1orf61-226ENST00000608007 SCAF1Q9H7N4 1312 aaKnown RBP11.55□□□□□ -0.56
C1orf61-226ENST00000608007 EHMT2Q96KQ7 1210 aa11.52□□□□□ -0.56
C1orf61-226ENST00000608007 AEBP2Q6ZN18 517 aaPredicted RBP11.48□□□□□ -0.57
C1orf61-226ENST00000608007 DCAF1Q9Y4B6 1507 aa11.37□□□□□ -0.59
C1orf61-226ENST00000608007 ZCCHC6Q5VYS8 1495 aaKnown RBP11.36□□□□□ -0.59
C1orf61-226ENST00000608007 DCAF8L2P0C7V8 631 aa11.34□□□□□ -0.59
C1orf61-226ENST00000608007 MYT1Q01538 1121 aa11.33□□□□□ -0.6
C1orf61-226ENST00000608007 CCDC180Q9P1Z9 1646 aa11.28□□□□□ -0.6
C1orf61-226ENST00000608007 TRIM26Q12899 539 aaPredicted RBP11.25□□□□□ -0.61
C1orf61-226ENST00000608007 LOC105371045A0A1W2PR82 267 aa11.22□□□□□ -0.61
C1orf61-226ENST00000608007 PLPPR3Q6T4P5 718 aa11.18□□□□□ -0.62
C1orf61-226ENST00000608007 ZEB1P37275 1124 aaPredicted RBP11.15□□□□□ -0.62
C1orf61-226ENST00000608007 ACIN1Q9UKV3 1341 aaKnown RBP11.15□□□□□ -0.62
C1orf61-226ENST00000608007 NEUROD1Q13562 356 aa11.15□□□□□ -0.62
C1orf61-226ENST00000608007 GTF3C3Q9Y5Q9 886 aa11.08□□□□□ -0.64
C1orf61-226ENST00000608007 PHF23Q9BUL5 403 aaPredicted RBP10.97□□□□□ -0.65
C1orf61-226ENST00000608007 RTN4Q9NQC3 1192 aaKnown RBP10.96□□□□□ -0.65
C1orf61-226ENST00000608007 ABCC9O60706 1549 aa10.96□□□□□ -0.66
C1orf61-226ENST00000608007 CENPBP07199 599 aaPredicted RBP10.89□□□□□ -0.67
C1orf61-226ENST00000608007 DIEXFQ68CQ4 756 aaKnown RBP10.84□□□□□ -0.67
C1orf61-226ENST00000608007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.79□□□□□ -0.68
C1orf61-226ENST00000608007 SCRIBQ14160 1630 aa10.76□□□□□ -0.69
C1orf61-226ENST00000608007 FAM9AQ8IZU1 332 aaPredicted RBP10.75□□□□□ -0.69
C1orf61-226ENST00000608007 BCL11AQ9H165 835 aa10.73□□□□□ -0.69
C1orf61-226ENST00000608007 RSF1Q96T23 1441 aaPredicted RBP10.73□□□□□ -0.69
C1orf61-226ENST00000608007 CCER1Q8TC90 406 aaPredicted RBP10.71□□□□□ -0.69
C1orf61-226ENST00000608007 TRIM41Q8WV44 630 aa10.71□□□□□ -0.7
C1orf61-226ENST00000608007 YTHDC1Q96MU7 727 aaKnown RBP10.7□□□□□ -0.7
C1orf61-226ENST00000608007 TTBK1Q5TCY1 1321 aaPredicted RBP10.69□□□□□ -0.7
C1orf61-226ENST00000608007 KCNA4P22459 653 aa10.69□□□□□ -0.7
C1orf61-226ENST00000608007 RB1CC1Q8TDY2 1594 aa10.66□□□□□ -0.7
C1orf61-226ENST00000608007 CSRNP3Q8WYN3 585 aa10.66□□□□□ -0.7
C1orf61-226ENST00000608007 ANP32EQ9BTT0 268 aa10.6□□□□□ -0.71
C1orf61-226ENST00000608007 MIER1Q8N108 512 aa10.59□□□□□ -0.71
C1orf61-226ENST00000608007 CECR2Q9BXF3 1484 aa10.58□□□□□ -0.72
C1orf61-226ENST00000608007 ZNF316A6NFI3 1004 aaPredicted RBP10.58□□□□□ -0.72
C1orf61-226ENST00000608007 TSHZ2Q9NRE2 1034 aa10.53□□□□□ -0.72
C1orf61-226ENST00000608007 MROH2BQ7Z745 1585 aa10.52□□□□□ -0.73
C1orf61-226ENST00000608007 PABPN1Q86U42 306 aaKnown RBP eCLIP10.51□□□□□ -0.73
C1orf61-226ENST00000608007 SUPT16HQ9Y5B9 1047 aaKnown RBP10.51□□□□□ -0.73
C1orf61-226ENST00000608007 PRKCSHP14314 528 aaPredicted RBP10.51□□□□□ -0.73
C1orf61-226ENST00000608007 NCBP3Q53F19 620 aaKnown RBP10.5□□□□□ -0.73
C1orf61-226ENST00000608007 DAXXQ9UER7 740 aaPredicted RBP10.49□□□□□ -0.73
C1orf61-226ENST00000608007 AMER1Q5JTC6 1135 aaPredicted RBP10.48□□□□□ -0.73
C1orf61-226ENST00000608007 WIZO95785 1651 aa10.48□□□□□ -0.73
C1orf61-226ENST00000608007 NACADO15069 1562 aa10.38□□□□□ -0.75
C1orf61-226ENST00000608007 CLSPNQ9HAW4 1339 aa10.37□□□□□ -0.75
C1orf61-226ENST00000608007 WRNQ14191 1432 aaPredicted RBP eCLIP10.35□□□□□ -0.75
C1orf61-226ENST00000608007 ABCC8Q09428 1581 aa10.33□□□□□ -0.76
C1orf61-226ENST00000608007 BAZ1AQ9NRL2 1556 aaPredicted RBP10.31□□□□□ -0.76
C1orf61-226ENST00000608007 EIF4G1Q04637 1599 aaKnown RBP10.31□□□□□ -0.76
C1orf61-226ENST00000608007 CCDC88BA6NC98 1476 aa10.31□□□□□ -0.76
C1orf61-226ENST00000608007 SOGA1O94964 1423 aa10.26□□□□□ -0.77
C1orf61-226ENST00000608007 CEP162Q5TB80 1403 aa10.25□□□□□ -0.77
C1orf61-226ENST00000608007 BCANQ96GW7 911 aa10.24□□□□□ -0.77
C1orf61-226ENST00000608007 RUSC2Q8N2Y8 1516 aa10.24□□□□□ -0.77
C1orf61-226ENST00000608007 RBM19Q9Y4C8 960 aaKnown RBP10.24□□□□□ -0.77
C1orf61-226ENST00000608007 MSH5O43196 834 aa10.23□□□□□ -0.77
C1orf61-226ENST00000608007 TOP2AP11388 1531 aaKnown RBP10.21□□□□□ -0.77
C1orf61-226ENST00000608007 SMARCA2P51531 1590 aa10.2□□□□□ -0.78
C1orf61-226ENST00000608007 HNRNPUL2Q1KMD3 747 aaKnown RBP10.2□□□□□ -0.78
C1orf61-226ENST00000608007 UBTFP17480 764 aaKnown RBP10.2□□□□□ -0.78
C1orf61-226ENST00000608007 SMARCA4P51532 1647 aa10.2□□□□□ -0.78
C1orf61-226ENST00000608007 KCNH8Q96L42 1107 aa10.19□□□□□ -0.78
C1orf61-226ENST00000608007 TIMELESSQ9UNS1 1208 aa10.17□□□□□ -0.78
C1orf61-226ENST00000608007 FKBP8Q14318 412 aa10.16□□□□□ -0.78
C1orf61-226ENST00000608007 UNC13AQ9UPW8 1703 aa10.15□□□□□ -0.78
C1orf61-226ENST00000608007 TNIKQ9UKE5 1360 aa10.14□□□□□ -0.79
C1orf61-226ENST00000608007 RANGAP1P46060 587 aaPredicted RBP10.11□□□□□ -0.79
C1orf61-226ENST00000608007 SLC4A1APQ9BWU0 796 aaKnown RBP10.11□□□□□ -0.79
C1orf61-226ENST00000608007 ITGAEP38570 1179 aa10.11□□□□□ -0.79
C1orf61-226ENST00000608007 ANO8Q9HCE9 1232 aaPredicted RBP10.08□□□□□ -0.8
C1orf61-226ENST00000608007 ERICH6Q7L0X2 663 aa10.07□□□□□ -0.8
C1orf61-226ENST00000608007 DHX57Q6P158 1386 aaKnown RBP10.06□□□□□ -0.8
C1orf61-226ENST00000608007 GOLGA3Q08378 1498 aa10.05□□□□□ -0.8
C1orf61-226ENST00000608007 APLP2Q06481 763 aa10.04□□□□□ -0.8
C1orf61-226ENST00000608007 DNAJC5BQ9UF47 199 aa10.04□□□□□ -0.8
C1orf61-226ENST00000608007 FANCIQ9NVI1 1328 aa10.04□□□□□ -0.8
C1orf61-226ENST00000608007 SYNJ1O43426 1573 aa10.03□□□□□ -0.8
C1orf61-226ENST00000608007 DEKP35659 375 aaKnown RBP10.02□□□□□ -0.8
C1orf61-226ENST00000608007 EEA1Q15075 1411 aa10.02□□□□□ -0.8
C1orf61-226ENST00000608007 BICRAQ9NZM4 1560 aa10.02□□□□□ -0.81
C1orf61-226ENST00000608007 TAOK2Q9UL54 1235 aa10.01□□□□□ -0.81
C1orf61-226ENST00000608007 TULP1O00294 542 aaPredicted RBP10□□□□□ -0.81
C1orf61-226ENST00000608007 CLIP1P30622 1438 aa9.99□□□□□ -0.81
C1orf61-226ENST00000608007 ADRA2BP18089 450 aa9.98□□□□□ -0.81
C1orf61-226ENST00000608007 RAPGEF2Q9Y4G8 1499 aa9.98□□□□□ -0.81
C1orf61-226ENST00000608007 SALL2Q9Y467 1007 aaPredicted RBP9.97□□□□□ -0.81
C1orf61-226ENST00000608007 NEFLP07196 543 aa9.96□□□□□ -0.81
C1orf61-226ENST00000608007 CEP164Q9UPV0 1460 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms