RNA–Protein interactions for RNA: ENST00000599436.1

MUC16-204, Transcript of mucin 16, cell surface associated, humanhuman

TSL 5

Gene MUC16, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC16-204ENST00000599436 NISCHQ9Y2I1 1504 aa16.24■□□□□ 0.19
MUC16-204ENST00000599436 SUPT5HO00267 1087 aaKnown RBP15.6■□□□□ 0.09
MUC16-204ENST00000599436 DCAF8L2P0C7V8 631 aa15.59■□□□□ 0.09
MUC16-204ENST00000599436 SHROOM4Q9ULL8 1493 aa15.47■□□□□ 0.07
MUC16-204ENST00000599436 PCGF6Q9BYE7 350 aa15.02■□□□□ -0
MUC16-204ENST00000599436 EHMT2Q96KQ7 1210 aa14.89□□□□□ -0.03
MUC16-204ENST00000599436 HRCP23327 699 aa14.65□□□□□ -0.06
MUC16-204ENST00000599436 FAM9AQ8IZU1 332 aaPredicted RBP14.62□□□□□ -0.07
MUC16-204ENST00000599436 PPARGC1BQ86YN6 1023 aaKnown RBP14.59□□□□□ -0.07
MUC16-204ENST00000599436 CHIC1Q5VXU3 224 aa14.49□□□□□ -0.09
MUC16-204ENST00000599436 LOC105371045A0A1W2PR82 267 aa14.46□□□□□ -0.09
MUC16-204ENST00000599436 TTBK1Q5TCY1 1321 aaPredicted RBP14.42□□□□□ -0.1
MUC16-204ENST00000599436 TRIM41Q8WV44 630 aa14.3□□□□□ -0.12
MUC16-204ENST00000599436 TRIM26Q12899 539 aaPredicted RBP14.28□□□□□ -0.12
MUC16-204ENST00000599436 ZEB1P37275 1124 aaPredicted RBP14.27□□□□□ -0.13
MUC16-204ENST00000599436 CCER1Q8TC90 406 aaPredicted RBP14.22□□□□□ -0.13
MUC16-204ENST00000599436 PELP1Q8IZL8 1130 aaKnown RBP14.17□□□□□ -0.14
MUC16-204ENST00000599436 CENPBP07199 599 aaPredicted RBP14.1□□□□□ -0.15
MUC16-204ENST00000599436 YTHDC1Q96MU7 727 aaKnown RBP14.06□□□□□ -0.16
MUC16-204ENST00000599436 RANGAP1P46060 587 aaPredicted RBP13.98□□□□□ -0.17
MUC16-204ENST00000599436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.96□□□□□ -0.18
MUC16-204ENST00000599436 APLP2Q06481 763 aa13.94□□□□□ -0.18
MUC16-204ENST00000599436 MYO15BQ96JP2 1530 aa13.9□□□□□ -0.18
MUC16-204ENST00000599436 UBTFP17480 764 aaKnown RBP13.89□□□□□ -0.19
MUC16-204ENST00000599436 DIEXFQ68CQ4 756 aaKnown RBP13.8□□□□□ -0.2
MUC16-204ENST00000599436 GTF3C3Q9Y5Q9 886 aa13.76□□□□□ -0.21
MUC16-204ENST00000599436 HNRNPUL2Q1KMD3 747 aaKnown RBP13.72□□□□□ -0.21
MUC16-204ENST00000599436 SCAF1Q9H7N4 1312 aaKnown RBP13.69□□□□□ -0.22
MUC16-204ENST00000599436 DCAF1Q9Y4B6 1507 aa13.66□□□□□ -0.22
MUC16-204ENST00000599436 MYT1Q01538 1121 aa13.66□□□□□ -0.22
MUC16-204ENST00000599436 ACIN1Q9UKV3 1341 aaKnown RBP13.64□□□□□ -0.23
MUC16-204ENST00000599436 ZCCHC6Q5VYS8 1495 aaKnown RBP13.59□□□□□ -0.23
MUC16-204ENST00000599436 NEUROD1Q13562 356 aa13.58□□□□□ -0.24
MUC16-204ENST00000599436 ITGAEP38570 1179 aa13.53□□□□□ -0.24
MUC16-204ENST00000599436 ATP1B4Q9UN42 357 aaPredicted RBP13.51□□□□□ -0.25
MUC16-204ENST00000599436 ZNF316A6NFI3 1004 aaPredicted RBP13.45□□□□□ -0.26
MUC16-204ENST00000599436 NEFLP07196 543 aa13.42□□□□□ -0.26
MUC16-204ENST00000599436 ERICH6Q7L0X2 663 aa13.41□□□□□ -0.26
MUC16-204ENST00000599436 BCANQ96GW7 911 aa13.35□□□□□ -0.27
MUC16-204ENST00000599436 MIER1Q8N108 512 aa13.27□□□□□ -0.29
MUC16-204ENST00000599436 CCDC180Q9P1Z9 1646 aa13.26□□□□□ -0.29
MUC16-204ENST00000599436 CSRNP3Q8WYN3 585 aa13.25□□□□□ -0.29
MUC16-204ENST00000599436 ABCC9O60706 1549 aa13.25□□□□□ -0.29
MUC16-204ENST00000599436 SCRIBQ14160 1630 aa13.21□□□□□ -0.29
MUC16-204ENST00000599436 CNGB1Q14028 1251 aaPredicted RBP13.19□□□□□ -0.3
MUC16-204ENST00000599436 PABPN1Q86U42 306 aaKnown RBP eCLIP13.19□□□□□ -0.3
MUC16-204ENST00000599436 RSF1Q96T23 1441 aaPredicted RBP13.19□□□□□ -0.3
MUC16-204ENST00000599436 FAM50AQ14320 339 aaKnown RBP13.11□□□□□ -0.31
MUC16-204ENST00000599436 POLR3GLQ9BT43 218 aa13.07□□□□□ -0.32
MUC16-204ENST00000599436 FKBP8Q14318 412 aa13.04□□□□□ -0.32
MUC16-204ENST00000599436 DDX10Q13206 875 aaKnown RBP13□□□□□ -0.33
MUC16-204ENST00000599436 CEP162Q5TB80 1403 aa13□□□□□ -0.33
MUC16-204ENST00000599436 ANP32CO43423 234 aa12.98□□□□□ -0.33
MUC16-204ENST00000599436 TRIM52Q96A61 297 aa12.96□□□□□ -0.33
MUC16-204ENST00000599436 HIRIP3Q9BW71 556 aaPredicted RBP12.96□□□□□ -0.34
MUC16-204ENST00000599436 P3H3Q8IVL6 736 aa12.95□□□□□ -0.34
MUC16-204ENST00000599436 RB1CC1Q8TDY2 1594 aa12.93□□□□□ -0.34
MUC16-204ENST00000599436 CECR2Q9BXF3 1484 aa12.91□□□□□ -0.34
MUC16-204ENST00000599436 CDK11AQ9UQ88 783 aaPredicted RBP12.89□□□□□ -0.35
MUC16-204ENST00000599436 CLIP1P30622 1438 aa12.87□□□□□ -0.35
MUC16-204ENST00000599436 SUPT16HQ9Y5B9 1047 aaKnown RBP12.87□□□□□ -0.35
MUC16-204ENST00000599436 CLSPNQ9HAW4 1339 aa12.85□□□□□ -0.35
MUC16-204ENST00000599436 SOGA1O94964 1423 aa12.85□□□□□ -0.35
MUC16-204ENST00000599436 IRX6P78412 446 aaPredicted RBP12.84□□□□□ -0.35
MUC16-204ENST00000599436 TNIKQ9UKE5 1360 aa12.84□□□□□ -0.35
MUC16-204ENST00000599436 HNRNPUQ00839 825 aaKnown RBP eCLIP12.82□□□□□ -0.36
MUC16-204ENST00000599436 ANP32EQ9BTT0 268 aa12.79□□□□□ -0.36
MUC16-204ENST00000599436 RTL5Q5HYW3 569 aaPredicted RBP12.78□□□□□ -0.36
MUC16-204ENST00000599436 GOLGA3Q08378 1498 aa12.77□□□□□ -0.37
MUC16-204ENST00000599436 ZNF326Q5BKZ1 582 aaKnown RBP12.77□□□□□ -0.37
MUC16-204ENST00000599436 CCDC88BA6NC98 1476 aa12.75□□□□□ -0.37
MUC16-204ENST00000599436 MROH2BQ7Z745 1585 aa12.75□□□□□ -0.37
MUC16-204ENST00000599436 ARID3CA6NKF2 412 aa12.74□□□□□ -0.37
MUC16-204ENST00000599436 ABCC8Q09428 1581 aa12.74□□□□□ -0.37
MUC16-204ENST00000599436 FAM9BQ8IZU0 186 aa12.73□□□□□ -0.37
MUC16-204ENST00000599436 DAXXQ9UER7 740 aaPredicted RBP12.72□□□□□ -0.37
MUC16-204ENST00000599436 SIN3AQ96ST3 1273 aa12.72□□□□□ -0.37
MUC16-204ENST00000599436 TONSLQ96HA7 1378 aa12.7□□□□□ -0.38
MUC16-204ENST00000599436 WRNQ14191 1432 aaPredicted RBP eCLIP12.7□□□□□ -0.38
MUC16-204ENST00000599436 EEA1Q15075 1411 aa12.7□□□□□ -0.38
MUC16-204ENST00000599436 TSHZ2Q9NRE2 1034 aa12.68□□□□□ -0.38
MUC16-204ENST00000599436 KCNH8Q96L42 1107 aa12.67□□□□□ -0.38
MUC16-204ENST00000599436 NBR1Q14596 966 aa12.67□□□□□ -0.38
MUC16-204ENST00000599436 SENP3-EIF4A1A0A087X0R7 540 aa12.67□□□□□ -0.38
MUC16-204ENST00000599436 KANK4Q5T7N3 995 aaPredicted RBP12.65□□□□□ -0.38
MUC16-204ENST00000599436 NPM2Q86SE8 214 aaKnown RBP12.65□□□□□ -0.38
MUC16-204ENST00000599436 CHIC2Q9UKJ5 165 aa12.64□□□□□ -0.39
MUC16-204ENST00000599436 CEP164Q9UPV0 1460 aa12.63□□□□□ -0.39
MUC16-204ENST00000599436 RUSC2Q8N2Y8 1516 aa12.61□□□□□ -0.39
MUC16-204ENST00000599436 WIZO95785 1651 aa12.61□□□□□ -0.39
MUC16-204ENST00000599436 RBM19Q9Y4C8 960 aaKnown RBP12.6□□□□□ -0.39
MUC16-204ENST00000599436 BCL11AQ9H165 835 aa12.6□□□□□ -0.39
MUC16-204ENST00000599436 SALL2Q9Y467 1007 aaPredicted RBP12.6□□□□□ -0.39
MUC16-204ENST00000599436 ANP32AP39687 249 aaKnown RBP12.59□□□□□ -0.39
MUC16-204ENST00000599436 MRS2Q9HD23 443 aa12.59□□□□□ -0.39
MUC16-204ENST00000599436 VPS8Q8N3P4 1428 aa12.56□□□□□ -0.4
MUC16-204ENST00000599436 BAZ1AQ9NRL2 1556 aaPredicted RBP12.55□□□□□ -0.4
MUC16-204ENST00000599436 CCDC136Q96JN2 1154 aa12.54□□□□□ -0.4
MUC16-204ENST00000599436 RRP7BPQ9NSQ0 103 aa12.53□□□□□ -0.4
MUC16-204ENST00000599436 CCNB3Q8WWL7 1395 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms