RNA–Protein interactions for RNA: ENST00000590570.1

HKR1-217, Transcript of HKR1, GLI-Kruppel zinc finger family member, humanhuman

TSL 4

Gene HKR1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1-217ENST00000590570 AEBP2Q6ZN18 517 aaPredicted RBP26.1■■□□□ 1.77
HKR1-217ENST00000590570 CHIC1Q5VXU3 224 aa24.44■■□□□ 1.5
HKR1-217ENST00000590570 SENP3Q9H4L4 574 aaPredicted RBP22.39■■□□□ 1.17
HKR1-217ENST00000590570 PHF23Q9BUL5 403 aaPredicted RBP22■■□□□ 1.11
HKR1-217ENST00000590570 FOXD1Q16676 465 aa20.9■□□□□ 0.94
HKR1-217ENST00000590570 POTEDQ86YR6 584 aa20.1■□□□□ 0.81
HKR1-217ENST00000590570 MSH5O43196 834 aa19.78■□□□□ 0.76
HKR1-217ENST00000590570 PIAS4Q8N2W9 510 aaPredicted RBP19.43■□□□□ 0.7
HKR1-217ENST00000590570 PLPPR3Q6T4P5 718 aa19.25■□□□□ 0.67
HKR1-217ENST00000590570 PPP6R1Q9UPN7 881 aa19.14■□□□□ 0.65
HKR1-217ENST00000590570 ADRA2BP18089 450 aa19.06■□□□□ 0.64
HKR1-217ENST00000590570 DMRT2Q9Y5R5 561 aa17.67■□□□□ 0.42
HKR1-217ENST00000590570 MAPK8IP2Q13387 824 aaPredicted RBP17.64■□□□□ 0.41
HKR1-217ENST00000590570 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
HKR1-217ENST00000590570 CACNB1Q02641 598 aaPredicted RBP17.25■□□□□ 0.35
HKR1-217ENST00000590570 DCAF8L1A6NGE4 600 aa16.96■□□□□ 0.31
HKR1-217ENST00000590570 HOXD11P31277 338 aaPredicted RBP16.83■□□□□ 0.28
HKR1-217ENST00000590570 RNF39Q9H2S5 420 aa16.81■□□□□ 0.28
HKR1-217ENST00000590570 PPP4R3CPQ6ZMV5 832 aa16.8■□□□□ 0.28
HKR1-217ENST00000590570 CNKSR2Q8WXI2 1034 aa16.6■□□□□ 0.25
HKR1-217ENST00000590570 RNF216Q9NWF9 866 aaPredicted RBP16.58■□□□□ 0.24
HKR1-217ENST00000590570 C1QBPQ07021 282 aaKnown RBP16.56■□□□□ 0.24
HKR1-217ENST00000590570 DNAJC5BQ9UF47 199 aa16.37■□□□□ 0.21
HKR1-217ENST00000590570 NISCHQ9Y2I1 1504 aa16.04■□□□□ 0.16
HKR1-217ENST00000590570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.04■□□□□ 0.16
HKR1-217ENST00000590570 NCBP3Q53F19 620 aaKnown RBP16.03■□□□□ 0.16
HKR1-217ENST00000590570 NPM3O75607 178 aaKnown RBP15.77■□□□□ 0.12
HKR1-217ENST00000590570 POTEHQ6S545 545 aa15.66■□□□□ 0.1
HKR1-217ENST00000590570 U3KPZ7 1027 aaPredicted RBP15.64■□□□□ 0.09
HKR1-217ENST00000590570 ABCC9O60706 1549 aa15.62■□□□□ 0.09
HKR1-217ENST00000590570 DSG3P32926 999 aa15.58■□□□□ 0.08
HKR1-217ENST00000590570 CAPN15O75808 1086 aa15.56■□□□□ 0.08
HKR1-217ENST00000590570 SPINK5Q9NQ38 1064 aaPredicted RBP15.54■□□□□ 0.08
HKR1-217ENST00000590570 APLP2Q06481 763 aa15.2■□□□□ 0.02
HKR1-217ENST00000590570 TRHP20396 242 aaPredicted RBP15.19■□□□□ 0.02
HKR1-217ENST00000590570 SLC4A2P04920 1241 aa15.17■□□□□ 0.02
HKR1-217ENST00000590570 ZNF219Q9P2Y4 722 aaPredicted RBP15.16■□□□□ 0.02
HKR1-217ENST00000590570 ABCB7O75027 752 aa15.14■□□□□ 0.01
HKR1-217ENST00000590570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.06■□□□□ 0
HKR1-217ENST00000590570 KCNA4P22459 653 aa15.06■□□□□ 0
HKR1-217ENST00000590570 HNRNPUL2Q1KMD3 747 aaKnown RBP15.06■□□□□ 0
HKR1-217ENST00000590570 SAMD1Q6SPF0 538 aaPredicted RBP14.94□□□□□ -0.02
HKR1-217ENST00000590570 RBM42Q9BTD8 480 aaKnown RBP14.91□□□□□ -0.02
HKR1-217ENST00000590570 CHRDL2Q6WN34 429 aa14.75□□□□□ -0.05
HKR1-217ENST00000590570 CCDC180Q9P1Z9 1646 aa14.73□□□□□ -0.05
HKR1-217ENST00000590570 DNAJC5Q9H3Z4 198 aa14.69□□□□□ -0.06
HKR1-217ENST00000590570 POLA2Q14181 598 aa14.66□□□□□ -0.06
HKR1-217ENST00000590570 MYCNP04198 464 aaPredicted RBP14.62□□□□□ -0.07
HKR1-217ENST00000590570 SP7Q8TDD2 431 aaPredicted RBP14.46□□□□□ -0.09
HKR1-217ENST00000590570 AKT1S1Q96B36 256 aa14.45□□□□□ -0.1
HKR1-217ENST00000590570 PABPN1Q86U42 306 aaKnown RBP eCLIP14.42□□□□□ -0.1
HKR1-217ENST00000590570 RB1CC1Q8TDY2 1594 aa14.42□□□□□ -0.1
HKR1-217ENST00000590570 ZBTB12Q9Y330 459 aaPredicted RBP14.37□□□□□ -0.11
HKR1-217ENST00000590570 SLC4A1APQ9BWU0 796 aaKnown RBP14.35□□□□□ -0.11
HKR1-217ENST00000590570 REM2Q8IYK8 340 aaPredicted RBP14.3□□□□□ -0.12
HKR1-217ENST00000590570 PIP4P2Q8N4L2 257 aa14.29□□□□□ -0.12
HKR1-217ENST00000590570 ATF5Q9Y2D1 282 aaPredicted RBP14.27□□□□□ -0.13
HKR1-217ENST00000590570 OSCARQ8IYS5 282 aa14.22□□□□□ -0.13
HKR1-217ENST00000590570 FOXD4L1Q9NU39 408 aa14.2□□□□□ -0.14
HKR1-217ENST00000590570 HAX1O00165 279 aa14.17□□□□□ -0.14
HKR1-217ENST00000590570 UNC13AQ9UPW8 1703 aa14.17□□□□□ -0.14
HKR1-217ENST00000590570 PELP1Q8IZL8 1130 aaKnown RBP14.16□□□□□ -0.14
HKR1-217ENST00000590570 PITPNM1O00562 1244 aa14.15□□□□□ -0.14
HKR1-217ENST00000590570 CECR2Q9BXF3 1484 aa14.13□□□□□ -0.15
HKR1-217ENST00000590570 FXR2P51116 673 aaKnown RBP eCLIP14.13□□□□□ -0.15
HKR1-217ENST00000590570 NACADO15069 1562 aa14.11□□□□□ -0.15
HKR1-217ENST00000590570 BICRAQ9NZM4 1560 aa14.11□□□□□ -0.15
HKR1-217ENST00000590570 MYT1Q01538 1121 aa14.05□□□□□ -0.16
HKR1-217ENST00000590570 CC2D2AQ9P2K1 1620 aa14.04□□□□□ -0.16
HKR1-217ENST00000590570 EVX2Q03828 476 aa13.92□□□□□ -0.18
HKR1-217ENST00000590570 DCAF8L2P0C7V8 631 aa13.89□□□□□ -0.19
HKR1-217ENST00000590570 SPDYE2BA6NHP3 402 aa13.87□□□□□ -0.19
HKR1-217ENST00000590570 SPDYE6P0CI01 402 aa13.87□□□□□ -0.19
HKR1-217ENST00000590570 SPDYE2Q495Y8 402 aa13.87□□□□□ -0.19
HKR1-217ENST00000590570 ATXN8OSP0DMR3 200 aa13.82□□□□□ -0.2
HKR1-217ENST00000590570 EIF4G1Q04637 1599 aaKnown RBP13.81□□□□□ -0.2
HKR1-217ENST00000590570 FBLN2P98095 1184 aa13.8□□□□□ -0.2
HKR1-217ENST00000590570 ZBTB22O15209 634 aa13.79□□□□□ -0.2
HKR1-217ENST00000590570 PRKAR2AP13861 404 aaKnown RBP13.79□□□□□ -0.2
HKR1-217ENST00000590570 SPDYE1Q8NFV5 336 aaPredicted RBP13.75□□□□□ -0.21
HKR1-217ENST00000590570 TRIM41Q8WV44 630 aa13.74□□□□□ -0.21
HKR1-217ENST00000590570 CLEC11AQ9Y240 323 aa13.74□□□□□ -0.21
HKR1-217ENST00000590570 CUX2O14529 1486 aa13.74□□□□□ -0.21
HKR1-217ENST00000590570 SHROOM4Q9ULL8 1493 aa13.73□□□□□ -0.21
HKR1-217ENST00000590570 C19orf67A6NJJ6 358 aa13.7□□□□□ -0.22
HKR1-217ENST00000590570 SSUH2Q9Y2M2 353 aa13.62□□□□□ -0.23
HKR1-217ENST00000590570 MYO15BQ96JP2 1530 aa13.61□□□□□ -0.23
HKR1-217ENST00000590570 GABBR2O75899 941 aa13.61□□□□□ -0.23
HKR1-217ENST00000590570 ZNF692Q9BU19 519 aaPredicted RBP13.61□□□□□ -0.23
HKR1-217ENST00000590570 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
HKR1-217ENST00000590570 LHX8Q68G74 356 aa13.55□□□□□ -0.24
HKR1-217ENST00000590570 CHADLQ6NUI6 762 aa13.51□□□□□ -0.25
HKR1-217ENST00000590570 ERCC6Q03468 1493 aa13.5□□□□□ -0.25
HKR1-217ENST00000590570 CSRNP3Q8WYN3 585 aa13.49□□□□□ -0.25
HKR1-217ENST00000590570 EHMT2Q96KQ7 1210 aa13.49□□□□□ -0.25
HKR1-217ENST00000590570 SCRIBQ14160 1630 aa13.45□□□□□ -0.26
HKR1-217ENST00000590570 PRR29P0C7W0 189 aa13.44□□□□□ -0.26
HKR1-217ENST00000590570 TTBK1Q5TCY1 1321 aaPredicted RBP13.42□□□□□ -0.26
HKR1-217ENST00000590570 CD44P16070 742 aaKnown RBP13.33□□□□□ -0.28
HKR1-217ENST00000590570 POTEIP0CG38 1075 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 343.2 ms