RNA–Protein interactions for RNA: ENST00000587444.1

VASP-204, Transcript of vasodilator stimulated phosphoprotein, humanhuman

TSL 2

Gene VASP, Length 240 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VASP-204ENST00000587444 CHIC1Q5VXU3 224 aa14.21□□□□□ -0.13
VASP-204ENST00000587444 AEBP2Q6ZN18 517 aaPredicted RBP13.87□□□□□ -0.19
VASP-204ENST00000587444 PHF23Q9BUL5 403 aaPredicted RBP12.52□□□□□ -0.41
VASP-204ENST00000587444 PLPPR3Q6T4P5 718 aa11.81□□□□□ -0.52
VASP-204ENST00000587444 SENP3Q9H4L4 574 aaPredicted RBP11.72□□□□□ -0.53
VASP-204ENST00000587444 NISCHQ9Y2I1 1504 aa11.68□□□□□ -0.54
VASP-204ENST00000587444 EHMT2Q96KQ7 1210 aa11.42□□□□□ -0.58
VASP-204ENST00000587444 KCNA4P22459 653 aa11.06□□□□□ -0.64
VASP-204ENST00000587444 ADRA2BP18089 450 aa10.93□□□□□ -0.66
VASP-204ENST00000587444 SLC24A1O60721 1099 aa10.86□□□□□ -0.67
VASP-204ENST00000587444 CSRNP3Q8WYN3 585 aa10.86□□□□□ -0.67
VASP-204ENST00000587444 PPP6R1Q9UPN7 881 aa10.8□□□□□ -0.68
VASP-204ENST00000587444 FOXD1Q16676 465 aa10.75□□□□□ -0.69
VASP-204ENST00000587444 ABCC9O60706 1549 aa10.73□□□□□ -0.69
VASP-204ENST00000587444 SLC4A1APQ9BWU0 796 aaKnown RBP10.64□□□□□ -0.71
VASP-204ENST00000587444 CCDC180Q9P1Z9 1646 aa10.55□□□□□ -0.72
VASP-204ENST00000587444 RTN4Q9NQC3 1192 aaKnown RBP10.46□□□□□ -0.73
VASP-204ENST00000587444 PPP4R3CPQ6ZMV5 832 aa10.44□□□□□ -0.74
VASP-204ENST00000587444 NCBP3Q53F19 620 aaKnown RBP10.39□□□□□ -0.75
VASP-204ENST00000587444 AMER1Q5JTC6 1135 aaPredicted RBP10.32□□□□□ -0.76
VASP-204ENST00000587444 MYT1Q01538 1121 aa10.29□□□□□ -0.76
VASP-204ENST00000587444 PIAS4Q8N2W9 510 aaPredicted RBP10.26□□□□□ -0.77
VASP-204ENST00000587444 ZBTB22O15209 634 aa10.21□□□□□ -0.77
VASP-204ENST00000587444 TTBK1Q5TCY1 1321 aaPredicted RBP10.21□□□□□ -0.78
VASP-204ENST00000587444 NPM3O75607 178 aaKnown RBP10.2□□□□□ -0.78
VASP-204ENST00000587444 DNAJC5BQ9UF47 199 aa10.15□□□□□ -0.78
VASP-204ENST00000587444 RB1CC1Q8TDY2 1594 aa10.13□□□□□ -0.79
VASP-204ENST00000587444 PELP1Q8IZL8 1130 aaKnown RBP10.08□□□□□ -0.8
VASP-204ENST00000587444 CNKSR2Q8WXI2 1034 aa10.06□□□□□ -0.8
VASP-204ENST00000587444 NACADO15069 1562 aa10.01□□□□□ -0.81
VASP-204ENST00000587444 SCAF1Q9H7N4 1312 aaKnown RBP9.97□□□□□ -0.81
VASP-204ENST00000587444 PABPN1Q86U42 306 aaKnown RBP eCLIP9.93□□□□□ -0.82
VASP-204ENST00000587444 DCAF8L2P0C7V8 631 aa9.89□□□□□ -0.83
VASP-204ENST00000587444 FOXD4L1Q9NU39 408 aa9.89□□□□□ -0.83
VASP-204ENST00000587444 DAXXQ9UER7 740 aaPredicted RBP9.85□□□□□ -0.83
VASP-204ENST00000587444 MYO15BQ96JP2 1530 aa9.83□□□□□ -0.84
VASP-204ENST00000587444 UNC13AQ9UPW8 1703 aa9.83□□□□□ -0.84
VASP-204ENST00000587444 BICRAQ9NZM4 1560 aa9.83□□□□□ -0.84
VASP-204ENST00000587444 FKBP8Q14318 412 aa9.75□□□□□ -0.85
VASP-204ENST00000587444 MSH5O43196 834 aa9.73□□□□□ -0.85
VASP-204ENST00000587444 RNF216Q9NWF9 866 aaPredicted RBP9.73□□□□□ -0.85
VASP-204ENST00000587444 SHROOM4Q9ULL8 1493 aa9.72□□□□□ -0.85
VASP-204ENST00000587444 ERICH6Q7L0X2 663 aa9.7□□□□□ -0.86
VASP-204ENST00000587444 CECR2Q9BXF3 1484 aa9.68□□□□□ -0.86
VASP-204ENST00000587444 ZCCHC6Q5VYS8 1495 aaKnown RBP9.67□□□□□ -0.86
VASP-204ENST00000587444 CC2D2AQ9P2K1 1620 aa9.66□□□□□ -0.86
VASP-204ENST00000587444 PRKCSHP14314 528 aaPredicted RBP9.65□□□□□ -0.86
VASP-204ENST00000587444 APLP2Q06481 763 aa9.65□□□□□ -0.86
VASP-204ENST00000587444 DCAF1Q9Y4B6 1507 aa9.64□□□□□ -0.87
VASP-204ENST00000587444 SCRIBQ14160 1630 aa9.63□□□□□ -0.87
VASP-204ENST00000587444 EIF4G1Q04637 1599 aaKnown RBP9.63□□□□□ -0.87
VASP-204ENST00000587444 MAPK8IP2Q13387 824 aaPredicted RBP9.59□□□□□ -0.87
VASP-204ENST00000587444 ATXN8OSP0DMR3 200 aa9.57□□□□□ -0.88
VASP-204ENST00000587444 HOXD11P31277 338 aaPredicted RBP9.55□□□□□ -0.88
VASP-204ENST00000587444 PLCB2Q00722 1185 aa9.52□□□□□ -0.89
VASP-204ENST00000587444 SLC4A2P04920 1241 aa9.5□□□□□ -0.89
VASP-204ENST00000587444 TAOK2Q9UL54 1235 aa9.46□□□□□ -0.9
VASP-204ENST00000587444 DMRT2Q9Y5R5 561 aa9.46□□□□□ -0.9
VASP-204ENST00000587444 MYCNP04198 464 aaPredicted RBP9.45□□□□□ -0.9
VASP-204ENST00000587444 HAP1P54257 671 aaPredicted RBP9.45□□□□□ -0.9
VASP-204ENST00000587444 BCANQ96GW7 911 aa9.45□□□□□ -0.9
VASP-204ENST00000587444 DNAJC5Q9H3Z4 198 aa9.45□□□□□ -0.9
VASP-204ENST00000587444 CUX2O14529 1486 aa9.33□□□□□ -0.92
VASP-204ENST00000587444 TPRNQ4KMQ1 711 aa9.32□□□□□ -0.92
VASP-204ENST00000587444 ERCC6Q03468 1493 aa9.29□□□□□ -0.92
VASP-204ENST00000587444 VSIG10Q8N0Z9 540 aa9.26□□□□□ -0.93
VASP-204ENST00000587444 ARXQ96QS3 562 aa9.25□□□□□ -0.93
VASP-204ENST00000587444 NCAPD3P42695 1498 aa9.25□□□□□ -0.93
VASP-204ENST00000587444 ATAD2BQ9ULI0 1458 aa9.2□□□□□ -0.94
VASP-204ENST00000587444 HMGXB3Q12766 1538 aa9.19□□□□□ -0.94
VASP-204ENST00000587444 SMARCA2P51531 1590 aa9.17□□□□□ -0.94
VASP-204ENST00000587444 TIMELESSQ9UNS1 1208 aa9.16□□□□□ -0.94
VASP-204ENST00000587444 KDM2AQ9Y2K7 1162 aa9.16□□□□□ -0.94
VASP-204ENST00000587444 NESP48681 1621 aa9.16□□□□□ -0.94
VASP-204ENST00000587444 SMARCA4P51532 1647 aa9.15□□□□□ -0.94
VASP-204ENST00000587444 BAZ1BQ9UIG0 1483 aaKnown RBP9.12□□□□□ -0.95
VASP-204ENST00000587444 THOC2Q8NI27 1593 aaKnown RBP9.12□□□□□ -0.95
VASP-204ENST00000587444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.11□□□□□ -0.95
VASP-204ENST00000587444 TULP1O00294 542 aaPredicted RBP9.11□□□□□ -0.95
VASP-204ENST00000587444 HNRNPUL2Q1KMD3 747 aaKnown RBP9.11□□□□□ -0.95
VASP-204ENST00000587444 FBLN2P98095 1184 aa9.1□□□□□ -0.95
VASP-204ENST00000587444 BAZ1AQ9NRL2 1556 aaPredicted RBP9.09□□□□□ -0.95
VASP-204ENST00000587444 SAMD1Q6SPF0 538 aaPredicted RBP9.09□□□□□ -0.95
VASP-204ENST00000587444 ATF5Q9Y2D1 282 aaPredicted RBP9.08□□□□□ -0.96
VASP-204ENST00000587444 LAMC3Q9Y6N6 1575 aa9.07□□□□□ -0.96
VASP-204ENST00000587444 RANGAP1P46060 587 aaPredicted RBP9.07□□□□□ -0.96
VASP-204ENST00000587444 PEG3Q9GZU2 1588 aa9.06□□□□□ -0.96
VASP-204ENST00000587444 FBXO3Q9UK99 471 aa9.05□□□□□ -0.96
VASP-204ENST00000587444 PDS5BQ9NTI5 1447 aa9.03□□□□□ -0.96
VASP-204ENST00000587444 KIF21AQ7Z4S6 1674 aa9.01□□□□□ -0.97
VASP-204ENST00000587444 TRIM41Q8WV44 630 aa9□□□□□ -0.97
VASP-204ENST00000587444 MROH2BQ7Z745 1585 aa8.99□□□□□ -0.97
VASP-204ENST00000587444 PKD2Q13563 968 aa8.99□□□□□ -0.97
VASP-204ENST00000587444 GTF3C3Q9Y5Q9 886 aa8.99□□□□□ -0.97
VASP-204ENST00000587444 EIF5BO60841 1220 aaKnown RBP8.98□□□□□ -0.97
VASP-204ENST00000587444 MRC2Q9UBG0 1479 aa8.97□□□□□ -0.97
VASP-204ENST00000587444 PAXIP1Q6ZW49 1069 aaPredicted RBP8.97□□□□□ -0.97
VASP-204ENST00000587444 IFNLR1Q8IU57 520 aaPredicted RBP8.97□□□□□ -0.97
VASP-204ENST00000587444 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.97□□□□□ -0.97
VASP-204ENST00000587444 VASPP50552 380 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms