RNA–Protein interactions for RNA: ENST00000580186.1

TMEM220-204, Transcript of transmembrane protein 220, humanhuman

TSL 2

Gene TMEM220, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-204ENST00000580186 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
TMEM220-204ENST00000580186 CHIC1Q5VXU3 224 aa20.4■□□□□ 0.86
TMEM220-204ENST00000580186 PHF23Q9BUL5 403 aaPredicted RBP17.92■□□□□ 0.46
TMEM220-204ENST00000580186 SENP3Q9H4L4 574 aaPredicted RBP17.55■□□□□ 0.4
TMEM220-204ENST00000580186 PLPPR3Q6T4P5 718 aa16.65■□□□□ 0.26
TMEM220-204ENST00000580186 FOXD1Q16676 465 aa16.22■□□□□ 0.19
TMEM220-204ENST00000580186 EHMT2Q96KQ7 1210 aa16.1■□□□□ 0.17
TMEM220-204ENST00000580186 KCNA4P22459 653 aa15.77■□□□□ 0.12
TMEM220-204ENST00000580186 PPP6R1Q9UPN7 881 aa15.72■□□□□ 0.11
TMEM220-204ENST00000580186 ADRA2BP18089 450 aa15.7■□□□□ 0.1
TMEM220-204ENST00000580186 CSRNP3Q8WYN3 585 aa15.34■□□□□ 0.05
TMEM220-204ENST00000580186 PIAS4Q8N2W9 510 aaPredicted RBP15.32■□□□□ 0.04
TMEM220-204ENST00000580186 SLC4A1APQ9BWU0 796 aaKnown RBP15.15■□□□□ 0.02
TMEM220-204ENST00000580186 MSH5O43196 834 aa14.95□□□□□ -0.02
TMEM220-204ENST00000580186 SLC24A1O60721 1099 aa14.9□□□□□ -0.02
TMEM220-204ENST00000580186 PPP4R3CPQ6ZMV5 832 aa14.79□□□□□ -0.04
TMEM220-204ENST00000580186 NCBP3Q53F19 620 aaKnown RBP14.6□□□□□ -0.07
TMEM220-204ENST00000580186 ZBTB22O15209 634 aa14.59□□□□□ -0.07
TMEM220-204ENST00000580186 RTN4Q9NQC3 1192 aaKnown RBP14.57□□□□□ -0.08
TMEM220-204ENST00000580186 NPM3O75607 178 aaKnown RBP14.53□□□□□ -0.08
TMEM220-204ENST00000580186 SCAF1Q9H7N4 1312 aaKnown RBP14.46□□□□□ -0.09
TMEM220-204ENST00000580186 AMER1Q5JTC6 1135 aaPredicted RBP14.4□□□□□ -0.1
TMEM220-204ENST00000580186 CNKSR2Q8WXI2 1034 aa14.25□□□□□ -0.13
TMEM220-204ENST00000580186 MAPK8IP2Q13387 824 aaPredicted RBP14.17□□□□□ -0.14
TMEM220-204ENST00000580186 FOXD4L1Q9NU39 408 aa14.09□□□□□ -0.15
TMEM220-204ENST00000580186 DMRT2Q9Y5R5 561 aa14.04□□□□□ -0.16
TMEM220-204ENST00000580186 RNF216Q9NWF9 866 aaPredicted RBP13.94□□□□□ -0.18
TMEM220-204ENST00000580186 NISCHQ9Y2I1 1504 aa13.9□□□□□ -0.18
TMEM220-204ENST00000580186 POTEDQ86YR6 584 aa13.9□□□□□ -0.18
TMEM220-204ENST00000580186 DNAJC5BQ9UF47 199 aa13.86□□□□□ -0.19
TMEM220-204ENST00000580186 HOXD11P31277 338 aaPredicted RBP13.85□□□□□ -0.19
TMEM220-204ENST00000580186 FKBP8Q14318 412 aa13.79□□□□□ -0.2
TMEM220-204ENST00000580186 SLC4A2P04920 1241 aa13.48□□□□□ -0.25
TMEM220-204ENST00000580186 ABCC9O60706 1549 aa13.41□□□□□ -0.26
TMEM220-204ENST00000580186 ATXN8OSP0DMR3 200 aa13.4□□□□□ -0.26
TMEM220-204ENST00000580186 MYCNP04198 464 aaPredicted RBP13.31□□□□□ -0.28
TMEM220-204ENST00000580186 PRKCSHP14314 528 aaPredicted RBP13.3□□□□□ -0.28
TMEM220-204ENST00000580186 DCAF8L1A6NGE4 600 aa13.29□□□□□ -0.28
TMEM220-204ENST00000580186 PLCB2Q00722 1185 aa13.28□□□□□ -0.28
TMEM220-204ENST00000580186 HAP1P54257 671 aaPredicted RBP13.17□□□□□ -0.3
TMEM220-204ENST00000580186 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.11□□□□□ -0.31
TMEM220-204ENST00000580186 BCANQ96GW7 911 aa13.09□□□□□ -0.31
TMEM220-204ENST00000580186 TAOK2Q9UL54 1235 aa13.07□□□□□ -0.32
TMEM220-204ENST00000580186 ATF5Q9Y2D1 282 aaPredicted RBP13.06□□□□□ -0.32
TMEM220-204ENST00000580186 DCAF8L2P0C7V8 631 aa12.94□□□□□ -0.34
TMEM220-204ENST00000580186 U3KPZ7 1027 aaPredicted RBP12.94□□□□□ -0.34
TMEM220-204ENST00000580186 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.91□□□□□ -0.34
TMEM220-204ENST00000580186 HNRNPUL2Q1KMD3 747 aaKnown RBP12.91□□□□□ -0.34
TMEM220-204ENST00000580186 TPRNQ4KMQ1 711 aa12.91□□□□□ -0.34
TMEM220-204ENST00000580186 VSIG10Q8N0Z9 540 aa12.89□□□□□ -0.35
TMEM220-204ENST00000580186 SAMD1Q6SPF0 538 aaPredicted RBP12.86□□□□□ -0.35
TMEM220-204ENST00000580186 DNAJC5Q9H3Z4 198 aa12.83□□□□□ -0.36
TMEM220-204ENST00000580186 FBXO3Q9UK99 471 aa12.83□□□□□ -0.36
TMEM220-204ENST00000580186 RNF39Q9H2S5 420 aa12.81□□□□□ -0.36
TMEM220-204ENST00000580186 KDM2AQ9Y2K7 1162 aa12.78□□□□□ -0.36
TMEM220-204ENST00000580186 VASPP50552 380 aaPredicted RBP12.75□□□□□ -0.37
TMEM220-204ENST00000580186 APLP2Q06481 763 aa12.74□□□□□ -0.37
TMEM220-204ENST00000580186 FBLN2P98095 1184 aa12.72□□□□□ -0.37
TMEM220-204ENST00000580186 PKD2Q13563 968 aa12.71□□□□□ -0.37
TMEM220-204ENST00000580186 IFNLR1Q8IU57 520 aaPredicted RBP12.71□□□□□ -0.37
TMEM220-204ENST00000580186 C1QBPQ07021 282 aaKnown RBP12.69□□□□□ -0.38
TMEM220-204ENST00000580186 SPDYE4A6NLX3 237 aa12.67□□□□□ -0.38
TMEM220-204ENST00000580186 CCDC180Q9P1Z9 1646 aa12.59□□□□□ -0.39
TMEM220-204ENST00000580186 PAXIP1Q6ZW49 1069 aaPredicted RBP12.59□□□□□ -0.39
TMEM220-204ENST00000580186 PROM2Q8N271 834 aa12.59□□□□□ -0.39
TMEM220-204ENST00000580186 ZNF219Q9P2Y4 722 aaPredicted RBP12.58□□□□□ -0.4
TMEM220-204ENST00000580186 TIMELESSQ9UNS1 1208 aa12.57□□□□□ -0.4
TMEM220-204ENST00000580186 NPM1P06748 294 aaKnown RBP eCLIP12.56□□□□□ -0.4
TMEM220-204ENST00000580186 CFAP44Q96MT7 982 aa12.56□□□□□ -0.4
TMEM220-204ENST00000580186 BBXQ8WY36 941 aaPredicted RBP12.55□□□□□ -0.4
TMEM220-204ENST00000580186 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.55□□□□□ -0.4
TMEM220-204ENST00000580186 MKRN4PQ13434 485 aaPredicted RBP12.51□□□□□ -0.41
TMEM220-204ENST00000580186 TULP1O00294 542 aaPredicted RBP12.49□□□□□ -0.41
TMEM220-204ENST00000580186 SPINK5Q9NQ38 1064 aaPredicted RBP12.49□□□□□ -0.41
TMEM220-204ENST00000580186 TSHZ2Q9NRE2 1034 aa12.46□□□□□ -0.41
TMEM220-204ENST00000580186 CAPN15O75808 1086 aa12.42□□□□□ -0.42
TMEM220-204ENST00000580186 ECM2O94769 699 aaPredicted RBP12.41□□□□□ -0.42
TMEM220-204ENST00000580186 TRHP20396 242 aaPredicted RBP12.39□□□□□ -0.43
TMEM220-204ENST00000580186 PABPN1Q86U42 306 aaKnown RBP eCLIP12.39□□□□□ -0.43
TMEM220-204ENST00000580186 RB1CC1Q8TDY2 1594 aa12.38□□□□□ -0.43
TMEM220-204ENST00000580186 DAXXQ9UER7 740 aaPredicted RBP12.36□□□□□ -0.43
TMEM220-204ENST00000580186 SPRYD3Q8NCJ5 442 aa12.33□□□□□ -0.44
TMEM220-204ENST00000580186 GTF3C3Q9Y5Q9 886 aa12.33□□□□□ -0.44
TMEM220-204ENST00000580186 RGL2O15211 777 aa12.3□□□□□ -0.44
TMEM220-204ENST00000580186 SPOCK2Q92563 424 aa12.29□□□□□ -0.44
TMEM220-204ENST00000580186 CACNB1Q02641 598 aaPredicted RBP12.28□□□□□ -0.44
TMEM220-204ENST00000580186 KLHL34Q8N239 644 aa12.28□□□□□ -0.44
TMEM220-204ENST00000580186 ARXQ96QS3 562 aa12.28□□□□□ -0.44
TMEM220-204ENST00000580186 POLA2Q14181 598 aa12.26□□□□□ -0.45
TMEM220-204ENST00000580186 NBR1Q14596 966 aa12.26□□□□□ -0.45
TMEM220-204ENST00000580186 DSG3P32926 999 aa12.23□□□□□ -0.45
TMEM220-204ENST00000580186 ZBTB12Q9Y330 459 aaPredicted RBP12.18□□□□□ -0.46
TMEM220-204ENST00000580186 ABCB7O75027 752 aa12.17□□□□□ -0.46
TMEM220-204ENST00000580186 CECR2Q9BXF3 1484 aa12.16□□□□□ -0.46
TMEM220-204ENST00000580186 CHGAP10645 457 aaKnown RBP12.15□□□□□ -0.46
TMEM220-204ENST00000580186 UNC13AQ9UPW8 1703 aa12.13□□□□□ -0.47
TMEM220-204ENST00000580186 BICRAQ9NZM4 1560 aa12.12□□□□□ -0.47
TMEM220-204ENST00000580186 NACADO15069 1562 aa12.11□□□□□ -0.47
TMEM220-204ENST00000580186 TMEM132AQ24JP5 1023 aa12.09□□□□□ -0.47
TMEM220-204ENST00000580186 CC2D2AQ9P2K1 1620 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms