RNA–Protein interactions for RNA: ENST00000579014.5

LAMA1-207, Transcript of laminin subunit alpha 1, humanhuman

TSL 2

Gene LAMA1, Length 10,374 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1-207ENST00000579014 NISCHQ9Y2I1 1504 aa17.44■□□□□ 0.38
LAMA1-207ENST00000579014 DCAF8L2P0C7V8 631 aa16.39■□□□□ 0.21
LAMA1-207ENST00000579014 PELP1Q8IZL8 1130 aaKnown RBP15.98■□□□□ 0.15
LAMA1-207ENST00000579014 MYT1Q01538 1121 aa15.64■□□□□ 0.09
LAMA1-207ENST00000579014 ERICH6Q7L0X2 663 aa15.4■□□□□ 0.06
LAMA1-207ENST00000579014 SUPT5HO00267 1087 aaKnown RBP15.39■□□□□ 0.05
LAMA1-207ENST00000579014 SHROOM4Q9ULL8 1493 aa15.33■□□□□ 0.05
LAMA1-207ENST00000579014 CCER1Q8TC90 406 aaPredicted RBP15.18■□□□□ 0.02
LAMA1-207ENST00000579014 FAM9AQ8IZU1 332 aaPredicted RBP15.02□□□□□ -0.01
LAMA1-207ENST00000579014 CCDC180Q9P1Z9 1646 aa15□□□□□ -0.01
LAMA1-207ENST00000579014 CENPBP07199 599 aaPredicted RBP14.96□□□□□ -0.01
LAMA1-207ENST00000579014 TTBK1Q5TCY1 1321 aaPredicted RBP14.84□□□□□ -0.03
LAMA1-207ENST00000579014 EHMT2Q96KQ7 1210 aa14.81□□□□□ -0.04
LAMA1-207ENST00000579014 APLP2Q06481 763 aa14.8□□□□□ -0.04
LAMA1-207ENST00000579014 YTHDC1Q96MU7 727 aaKnown RBP14.71□□□□□ -0.06
LAMA1-207ENST00000579014 ABCC9O60706 1549 aa14.68□□□□□ -0.06
LAMA1-207ENST00000579014 NEFLP07196 543 aa14.61□□□□□ -0.07
LAMA1-207ENST00000579014 TRIM41Q8WV44 630 aa14.61□□□□□ -0.07
LAMA1-207ENST00000579014 PCGF6Q9BYE7 350 aa14.58□□□□□ -0.08
LAMA1-207ENST00000579014 ZCCHC6Q5VYS8 1495 aaKnown RBP14.52□□□□□ -0.09
LAMA1-207ENST00000579014 ZEB1P37275 1124 aaPredicted RBP14.49□□□□□ -0.09
LAMA1-207ENST00000579014 DAXXQ9UER7 740 aaPredicted RBP14.45□□□□□ -0.1
LAMA1-207ENST00000579014 RB1CC1Q8TDY2 1594 aa14.38□□□□□ -0.11
LAMA1-207ENST00000579014 NACADO15069 1562 aa14.34□□□□□ -0.11
LAMA1-207ENST00000579014 UBTFP17480 764 aaKnown RBP14.29□□□□□ -0.12
LAMA1-207ENST00000579014 DCAF1Q9Y4B6 1507 aa14.26□□□□□ -0.13
LAMA1-207ENST00000579014 RTL5Q5HYW3 569 aaPredicted RBP14.25□□□□□ -0.13
LAMA1-207ENST00000579014 SCRIBQ14160 1630 aa14.18□□□□□ -0.14
LAMA1-207ENST00000579014 PABPN1Q86U42 306 aaKnown RBP eCLIP14.15□□□□□ -0.14
LAMA1-207ENST00000579014 RANGAP1P46060 587 aaPredicted RBP14.1□□□□□ -0.15
LAMA1-207ENST00000579014 ZNF316A6NFI3 1004 aaPredicted RBP14.09□□□□□ -0.15
LAMA1-207ENST00000579014 ATP1B4Q9UN42 357 aaPredicted RBP14.05□□□□□ -0.16
LAMA1-207ENST00000579014 MYO15BQ96JP2 1530 aa14.04□□□□□ -0.16
LAMA1-207ENST00000579014 CHIC1Q5VXU3 224 aa14.01□□□□□ -0.17
LAMA1-207ENST00000579014 GLIPR1L2Q4G1C9 344 aa13.94□□□□□ -0.18
LAMA1-207ENST00000579014 HRCP23327 699 aa13.92□□□□□ -0.18
LAMA1-207ENST00000579014 TRIM26Q12899 539 aaPredicted RBP13.88□□□□□ -0.19
LAMA1-207ENST00000579014 EIF5BO60841 1220 aaKnown RBP13.88□□□□□ -0.19
LAMA1-207ENST00000579014 BAZ1AQ9NRL2 1556 aaPredicted RBP13.83□□□□□ -0.2
LAMA1-207ENST00000579014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.79□□□□□ -0.2
LAMA1-207ENST00000579014 HNRNPUL2Q1KMD3 747 aaKnown RBP13.79□□□□□ -0.2
LAMA1-207ENST00000579014 PPARGC1BQ86YN6 1023 aaKnown RBP13.79□□□□□ -0.2
LAMA1-207ENST00000579014 CLSPNQ9HAW4 1339 aa13.78□□□□□ -0.2
LAMA1-207ENST00000579014 BAZ1BQ9UIG0 1483 aaKnown RBP13.72□□□□□ -0.21
LAMA1-207ENST00000579014 EEA1Q15075 1411 aa13.69□□□□□ -0.22
LAMA1-207ENST00000579014 CSRNP3Q8WYN3 585 aa13.66□□□□□ -0.22
LAMA1-207ENST00000579014 RSF1Q96T23 1441 aaPredicted RBP13.65□□□□□ -0.22
LAMA1-207ENST00000579014 SMARCA2P51531 1590 aa13.64□□□□□ -0.23
LAMA1-207ENST00000579014 MYT1LQ9UL68 1186 aa13.64□□□□□ -0.23
LAMA1-207ENST00000579014 CDK11AQ9UQ88 783 aaPredicted RBP13.61□□□□□ -0.23
LAMA1-207ENST00000579014 POLR3GLQ9BT43 218 aa13.61□□□□□ -0.23
LAMA1-207ENST00000579014 GTF3C3Q9Y5Q9 886 aa13.61□□□□□ -0.23
LAMA1-207ENST00000579014 ITGAEP38570 1179 aa13.55□□□□□ -0.24
LAMA1-207ENST00000579014 DIEXFQ68CQ4 756 aaKnown RBP13.55□□□□□ -0.24
LAMA1-207ENST00000579014 LOC105371045A0A1W2PR82 267 aa13.55□□□□□ -0.24
LAMA1-207ENST00000579014 BCANQ96GW7 911 aa13.54□□□□□ -0.24
LAMA1-207ENST00000579014 ANP32BQ92688 251 aaKnown RBP13.5□□□□□ -0.25
LAMA1-207ENST00000579014 ACIN1Q9UKV3 1341 aaKnown RBP13.5□□□□□ -0.25
LAMA1-207ENST00000579014 FBLN2P98095 1184 aa13.5□□□□□ -0.25
LAMA1-207ENST00000579014 ANP32AP39687 249 aaKnown RBP13.49□□□□□ -0.25
LAMA1-207ENST00000579014 CNGB1Q14028 1251 aaPredicted RBP13.47□□□□□ -0.25
LAMA1-207ENST00000579014 WRNQ14191 1432 aaPredicted RBP eCLIP13.45□□□□□ -0.26
LAMA1-207ENST00000579014 FAM50AQ14320 339 aaKnown RBP13.43□□□□□ -0.26
LAMA1-207ENST00000579014 KIF27Q86VH2 1401 aa13.42□□□□□ -0.26
LAMA1-207ENST00000579014 GOLGA3Q08378 1498 aa13.4□□□□□ -0.27
LAMA1-207ENST00000579014 TOP2AP11388 1531 aaKnown RBP13.38□□□□□ -0.27
LAMA1-207ENST00000579014 NPM1P06748 294 aaKnown RBP eCLIP13.37□□□□□ -0.27
LAMA1-207ENST00000579014 ERCC6Q03468 1493 aa13.37□□□□□ -0.27
LAMA1-207ENST00000579014 PDS5BQ9NTI5 1447 aa13.36□□□□□ -0.27
LAMA1-207ENST00000579014 CEP164Q9UPV0 1460 aa13.35□□□□□ -0.27
LAMA1-207ENST00000579014 CHMP7Q8WUX9 453 aaPredicted RBP13.33□□□□□ -0.28
LAMA1-207ENST00000579014 ZBTB47Q9UFB7 747 aaPredicted RBP13.32□□□□□ -0.28
LAMA1-207ENST00000579014 CECR2Q9BXF3 1484 aa13.32□□□□□ -0.28
LAMA1-207ENST00000579014 TNNT2P45379 298 aaPredicted RBP13.32□□□□□ -0.28
LAMA1-207ENST00000579014 TRIM52Q96A61 297 aa13.31□□□□□ -0.28
LAMA1-207ENST00000579014 SMARCA4P51532 1647 aa13.31□□□□□ -0.28
LAMA1-207ENST00000579014 SLC4A1APQ9BWU0 796 aaKnown RBP13.3□□□□□ -0.28
LAMA1-207ENST00000579014 NPM2Q86SE8 214 aaKnown RBP13.29□□□□□ -0.28
LAMA1-207ENST00000579014 MROH2BQ7Z745 1585 aa13.29□□□□□ -0.28
LAMA1-207ENST00000579014 NBR1Q14596 966 aa13.27□□□□□ -0.28
LAMA1-207ENST00000579014 CLIP1P30622 1438 aa13.27□□□□□ -0.29
LAMA1-207ENST00000579014 ABCC8Q09428 1581 aa13.25□□□□□ -0.29
LAMA1-207ENST00000579014 ANP32CO43423 234 aa13.23□□□□□ -0.29
LAMA1-207ENST00000579014 TNIKQ9UKE5 1360 aa13.22□□□□□ -0.29
LAMA1-207ENST00000579014 CCDC88BA6NC98 1476 aa13.21□□□□□ -0.3
LAMA1-207ENST00000579014 MTUS2Q5JR59 1369 aa13.2□□□□□ -0.3
LAMA1-207ENST00000579014 FHAD1B1AJZ9 1412 aa13.2□□□□□ -0.3
LAMA1-207ENST00000579014 ATAD2BQ9ULI0 1458 aa13.19□□□□□ -0.3
LAMA1-207ENST00000579014 HSP90AA1P07900 732 aaKnown RBP13.19□□□□□ -0.3
LAMA1-207ENST00000579014 CDK11BP21127 795 aaKnown RBP13.18□□□□□ -0.3
LAMA1-207ENST00000579014 CANXP27824 592 aaKnown RBP13.17□□□□□ -0.3
LAMA1-207ENST00000579014 P3H3Q8IVL6 736 aa13.17□□□□□ -0.3
LAMA1-207ENST00000579014 NEUROD1Q13562 356 aa13.17□□□□□ -0.3
LAMA1-207ENST00000579014 ARXQ96QS3 562 aa13.16□□□□□ -0.3
LAMA1-207ENST00000579014 ESF1Q9H501 851 aaKnown RBP13.16□□□□□ -0.3
LAMA1-207ENST00000579014 BCL11AQ9H165 835 aa13.15□□□□□ -0.3
LAMA1-207ENST00000579014 CADPSQ9ULU8 1353 aa13.15□□□□□ -0.3
LAMA1-207ENST00000579014 WIZO95785 1651 aa13.13□□□□□ -0.31
LAMA1-207ENST00000579014 CEP162Q5TB80 1403 aa13.13□□□□□ -0.31
LAMA1-207ENST00000579014 TSPY4P0CV99 314 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms