RNA–Protein interactions for RNA: ENST00000573483.1

CAMKK1-204, Transcript of calcium/calmodulin dependent protein kinase kinase 1, humanhuman

TSL 2

Gene CAMKK1, Length 3,898 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAMKK1-204ENST00000573483 NISCHQ9Y2I1 1504 aa22.28■■□□□ 1.16
CAMKK1-204ENST00000573483 SHROOM4Q9ULL8 1493 aa19.91■□□□□ 0.78
CAMKK1-204ENST00000573483 SUPT5HO00267 1087 aaKnown RBP19.78■□□□□ 0.76
CAMKK1-204ENST00000573483 DCAF8L2P0C7V8 631 aa19.59■□□□□ 0.73
CAMKK1-204ENST00000573483 PCGF6Q9BYE7 350 aa18.95■□□□□ 0.62
CAMKK1-204ENST00000573483 CHIC1Q5VXU3 224 aa18.95■□□□□ 0.62
CAMKK1-204ENST00000573483 HRCP23327 699 aa18.83■□□□□ 0.61
CAMKK1-204ENST00000573483 ZCCHC6Q5VYS8 1495 aaKnown RBP18.79■□□□□ 0.6
CAMKK1-204ENST00000573483 MYO15BQ96JP2 1530 aa18.65■□□□□ 0.58
CAMKK1-204ENST00000573483 LOC105371045A0A1W2PR82 267 aa18.62■□□□□ 0.57
CAMKK1-204ENST00000573483 PPARGC1BQ86YN6 1023 aaKnown RBP18.58■□□□□ 0.57
CAMKK1-204ENST00000573483 CCDC180Q9P1Z9 1646 aa18.51■□□□□ 0.55
CAMKK1-204ENST00000573483 EHMT2Q96KQ7 1210 aa18.44■□□□□ 0.54
CAMKK1-204ENST00000573483 FAM9AQ8IZU1 332 aaPredicted RBP18.38■□□□□ 0.53
CAMKK1-204ENST00000573483 TRIM26Q12899 539 aaPredicted RBP18.32■□□□□ 0.52
CAMKK1-204ENST00000573483 TRIM41Q8WV44 630 aa18.28■□□□□ 0.52
CAMKK1-204ENST00000573483 ABCC9O60706 1549 aa18.21■□□□□ 0.51
CAMKK1-204ENST00000573483 DCAF1Q9Y4B6 1507 aa18.18■□□□□ 0.5
CAMKK1-204ENST00000573483 ZEB1P37275 1124 aaPredicted RBP18.08■□□□□ 0.49
CAMKK1-204ENST00000573483 SCRIBQ14160 1630 aa17.86■□□□□ 0.45
CAMKK1-204ENST00000573483 TTBK1Q5TCY1 1321 aaPredicted RBP17.86■□□□□ 0.45
CAMKK1-204ENST00000573483 RSF1Q96T23 1441 aaPredicted RBP17.85■□□□□ 0.45
CAMKK1-204ENST00000573483 CCER1Q8TC90 406 aaPredicted RBP17.8■□□□□ 0.44
CAMKK1-204ENST00000573483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.72■□□□□ 0.43
CAMKK1-204ENST00000573483 PABPN1Q86U42 306 aaKnown RBP eCLIP17.67■□□□□ 0.42
CAMKK1-204ENST00000573483 RB1CC1Q8TDY2 1594 aa17.62■□□□□ 0.41
CAMKK1-204ENST00000573483 PELP1Q8IZL8 1130 aaKnown RBP17.59■□□□□ 0.41
CAMKK1-204ENST00000573483 UBTFP17480 764 aaKnown RBP17.53■□□□□ 0.4
CAMKK1-204ENST00000573483 SCAF1Q9H7N4 1312 aaKnown RBP17.52■□□□□ 0.4
CAMKK1-204ENST00000573483 CECR2Q9BXF3 1484 aa17.52■□□□□ 0.4
CAMKK1-204ENST00000573483 CENPBP07199 599 aaPredicted RBP17.46■□□□□ 0.39
CAMKK1-204ENST00000573483 DIEXFQ68CQ4 756 aaKnown RBP17.44■□□□□ 0.38
CAMKK1-204ENST00000573483 MROH2BQ7Z745 1585 aa17.4■□□□□ 0.38
CAMKK1-204ENST00000573483 RANGAP1P46060 587 aaPredicted RBP17.37■□□□□ 0.37
CAMKK1-204ENST00000573483 ACIN1Q9UKV3 1341 aaKnown RBP17.35■□□□□ 0.37
CAMKK1-204ENST00000573483 YTHDC1Q96MU7 727 aaKnown RBP17.34■□□□□ 0.37
CAMKK1-204ENST00000573483 APLP2Q06481 763 aa17.31■□□□□ 0.36
CAMKK1-204ENST00000573483 NEUROD1Q13562 356 aa17.31■□□□□ 0.36
CAMKK1-204ENST00000573483 GTF3C3Q9Y5Q9 886 aa17.29■□□□□ 0.36
CAMKK1-204ENST00000573483 HNRNPUL2Q1KMD3 747 aaKnown RBP17.29■□□□□ 0.36
CAMKK1-204ENST00000573483 NACADO15069 1562 aa17.29■□□□□ 0.36
CAMKK1-204ENST00000573483 WIZO95785 1651 aa17.28■□□□□ 0.36
CAMKK1-204ENST00000573483 CSRNP3Q8WYN3 585 aa17.25■□□□□ 0.35
CAMKK1-204ENST00000573483 CEP162Q5TB80 1403 aa17.17■□□□□ 0.34
CAMKK1-204ENST00000573483 ZNF316A6NFI3 1004 aaPredicted RBP17.17■□□□□ 0.34
CAMKK1-204ENST00000573483 ABCC8Q09428 1581 aa17.14■□□□□ 0.33
CAMKK1-204ENST00000573483 CCDC88BA6NC98 1476 aa17.13■□□□□ 0.33
CAMKK1-204ENST00000573483 BAZ1AQ9NRL2 1556 aaPredicted RBP17.12■□□□□ 0.33
CAMKK1-204ENST00000573483 SOGA1O94964 1423 aa17.12■□□□□ 0.33
CAMKK1-204ENST00000573483 TNIKQ9UKE5 1360 aa17.06■□□□□ 0.32
CAMKK1-204ENST00000573483 WRNQ14191 1432 aaPredicted RBP eCLIP16.96■□□□□ 0.31
CAMKK1-204ENST00000573483 RUSC2Q8N2Y8 1516 aa16.96■□□□□ 0.31
CAMKK1-204ENST00000573483 MIER1Q8N108 512 aa16.96■□□□□ 0.31
CAMKK1-204ENST00000573483 EEA1Q15075 1411 aa16.95■□□□□ 0.3
CAMKK1-204ENST00000573483 TOP2AP11388 1531 aaKnown RBP16.95■□□□□ 0.3
CAMKK1-204ENST00000573483 GOLGA3Q08378 1498 aa16.94■□□□□ 0.3
CAMKK1-204ENST00000573483 CLIP1P30622 1438 aa16.88■□□□□ 0.29
CAMKK1-204ENST00000573483 ITGAEP38570 1179 aa16.88■□□□□ 0.29
CAMKK1-204ENST00000573483 SMARCA4P51532 1647 aa16.86■□□□□ 0.29
CAMKK1-204ENST00000573483 SMARCA2P51531 1590 aa16.85■□□□□ 0.29
CAMKK1-204ENST00000573483 CEP164Q9UPV0 1460 aa16.79■□□□□ 0.28
CAMKK1-204ENST00000573483 MYT1Q01538 1121 aa16.78■□□□□ 0.28
CAMKK1-204ENST00000573483 EIF4G1Q04637 1599 aaKnown RBP16.75■□□□□ 0.27
CAMKK1-204ENST00000573483 ATP1B4Q9UN42 357 aaPredicted RBP16.72■□□□□ 0.27
CAMKK1-204ENST00000573483 VPS8Q8N3P4 1428 aa16.7■□□□□ 0.26
CAMKK1-204ENST00000573483 RAPGEF2Q9Y4G8 1499 aa16.64■□□□□ 0.25
CAMKK1-204ENST00000573483 BAZ1BQ9UIG0 1483 aaKnown RBP16.62■□□□□ 0.25
CAMKK1-204ENST00000573483 KANK4Q5T7N3 995 aaPredicted RBP16.59■□□□□ 0.25
CAMKK1-204ENST00000573483 SYNJ1O43426 1573 aa16.55■□□□□ 0.24
CAMKK1-204ENST00000573483 FAM50AQ14320 339 aaKnown RBP16.54■□□□□ 0.24
CAMKK1-204ENST00000573483 ATAD2BQ9ULI0 1458 aa16.5■□□□□ 0.23
CAMKK1-204ENST00000573483 BCANQ96GW7 911 aa16.5■□□□□ 0.23
CAMKK1-204ENST00000573483 CLSPNQ9HAW4 1339 aa16.5■□□□□ 0.23
CAMKK1-204ENST00000573483 KIF21BO75037 1637 aa16.48■□□□□ 0.23
CAMKK1-204ENST00000573483 DHX57Q6P158 1386 aaKnown RBP16.48■□□□□ 0.23
CAMKK1-204ENST00000573483 P3H3Q8IVL6 736 aa16.48■□□□□ 0.23
CAMKK1-204ENST00000573483 SUPT16HQ9Y5B9 1047 aaKnown RBP16.45■□□□□ 0.22
CAMKK1-204ENST00000573483 UNC13AQ9UPW8 1703 aa16.44■□□□□ 0.22
CAMKK1-204ENST00000573483 NEFLP07196 543 aa16.44■□□□□ 0.22
CAMKK1-204ENST00000573483 DDX10Q13206 875 aaKnown RBP16.44■□□□□ 0.22
CAMKK1-204ENST00000573483 KIF27Q86VH2 1401 aa16.41■□□□□ 0.22
CAMKK1-204ENST00000573483 CCNB3Q8WWL7 1395 aa16.41■□□□□ 0.22
CAMKK1-204ENST00000573483 HIRIP3Q9BW71 556 aaPredicted RBP16.38■□□□□ 0.21
CAMKK1-204ENST00000573483 BICRAQ9NZM4 1560 aa16.37■□□□□ 0.21
CAMKK1-204ENST00000573483 SIN3AQ96ST3 1273 aa16.35■□□□□ 0.21
CAMKK1-204ENST00000573483 FKBP8Q14318 412 aa16.34■□□□□ 0.21
CAMKK1-204ENST00000573483 KCNH8Q96L42 1107 aa16.34■□□□□ 0.21
CAMKK1-204ENST00000573483 ARAP1Q96P48 1450 aa16.3■□□□□ 0.2
CAMKK1-204ENST00000573483 ANP32CO43423 234 aa16.3■□□□□ 0.2
CAMKK1-204ENST00000573483 RAB3GAP2Q9H2M9 1393 aa16.3■□□□□ 0.2
CAMKK1-204ENST00000573483 TRIM52Q96A61 297 aa16.28■□□□□ 0.2
CAMKK1-204ENST00000573483 PEG3Q9GZU2 1588 aa16.27■□□□□ 0.2
CAMKK1-204ENST00000573483 PRXQ9BXM0 1461 aa16.27■□□□□ 0.19
CAMKK1-204ENST00000573483 TOP2BQ02880 1626 aa16.26■□□□□ 0.19
CAMKK1-204ENST00000573483 CUX2O14529 1486 aa16.23■□□□□ 0.19
CAMKK1-204ENST00000573483 TSHZ2Q9NRE2 1034 aa16.21■□□□□ 0.19
CAMKK1-204ENST00000573483 ERICH3Q5RHP9 1530 aa16.21■□□□□ 0.19
CAMKK1-204ENST00000573483 RRBP1Q9P2E9 1410 aaKnown RBP16.21■□□□□ 0.19
CAMKK1-204ENST00000573483 SETD5Q9C0A6 1442 aa16.21■□□□□ 0.19
CAMKK1-204ENST00000573483 CARMIL1Q5VZK9 1371 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms