RNA–Protein interactions for RNA: ENST00000572111.1

SRL-203, Transcript of sarcalumenin, humanhuman

TSL 1 (best)

Gene SRL, Length 5,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRL-203ENST00000572111 DCAF8L2P0C7V8 631 aa26.51■■□□□ 1.83
SRL-203ENST00000572111 NISCHQ9Y2I1 1504 aa25.65■■□□□ 1.7
SRL-203ENST00000572111 SUPT5HO00267 1087 aaKnown RBP24.58■■□□□ 1.53
SRL-203ENST00000572111 SHROOM4Q9ULL8 1493 aa24.47■■□□□ 1.51
SRL-203ENST00000572111 EHMT2Q96KQ7 1210 aa23.8■■□□□ 1.4
SRL-203ENST00000572111 PELP1Q8IZL8 1130 aaKnown RBP23.36■■□□□ 1.33
SRL-203ENST00000572111 FAM9AQ8IZU1 332 aaPredicted RBP23.27■■□□□ 1.32
SRL-203ENST00000572111 APLP2Q06481 763 aa23.25■■□□□ 1.31
SRL-203ENST00000572111 RANGAP1P46060 587 aaPredicted RBP22.97■■□□□ 1.27
SRL-203ENST00000572111 PCGF6Q9BYE7 350 aa22.92■■□□□ 1.26
SRL-203ENST00000572111 TTBK1Q5TCY1 1321 aaPredicted RBP22.87■■□□□ 1.25
SRL-203ENST00000572111 TRIM41Q8WV44 630 aa22.82■■□□□ 1.24
SRL-203ENST00000572111 ATP1B4Q9UN42 357 aaPredicted RBP22.79■■□□□ 1.24
SRL-203ENST00000572111 ABCC9O60706 1549 aa22.62■■□□□ 1.21
SRL-203ENST00000572111 CENPBP07199 599 aaPredicted RBP22.6■■□□□ 1.21
SRL-203ENST00000572111 UBTFP17480 764 aaKnown RBP22.59■■□□□ 1.21
SRL-203ENST00000572111 ERICH6Q7L0X2 663 aa22.57■■□□□ 1.2
SRL-203ENST00000572111 ZEB1P37275 1124 aaPredicted RBP22.4■■□□□ 1.18
SRL-203ENST00000572111 PABPN1Q86U42 306 aaKnown RBP eCLIP22.39■■□□□ 1.18
SRL-203ENST00000572111 CCER1Q8TC90 406 aaPredicted RBP22.39■■□□□ 1.18
SRL-203ENST00000572111 YTHDC1Q96MU7 727 aaKnown RBP22.26■■□□□ 1.15
SRL-203ENST00000572111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.15■■□□□ 1.14
SRL-203ENST00000572111 HNRNPUL2Q1KMD3 747 aaKnown RBP22.15■■□□□ 1.14
SRL-203ENST00000572111 MYT1Q01538 1121 aa22.12■■□□□ 1.13
SRL-203ENST00000572111 MYT1LQ9UL68 1186 aa22.11■■□□□ 1.13
SRL-203ENST00000572111 NEFLP07196 543 aa22.03■■□□□ 1.12
SRL-203ENST00000572111 PPARGC1BQ86YN6 1023 aaKnown RBP21.95■■□□□ 1.1
SRL-203ENST00000572111 ITGAEP38570 1179 aa21.78■■□□□ 1.08
SRL-203ENST00000572111 HRCP23327 699 aa21.77■■□□□ 1.08
SRL-203ENST00000572111 TRIM26Q12899 539 aaPredicted RBP21.73■■□□□ 1.07
SRL-203ENST00000572111 FBLN2P98095 1184 aa21.66■■□□□ 1.06
SRL-203ENST00000572111 CHIC1Q5VXU3 224 aa21.65■■□□□ 1.06
SRL-203ENST00000572111 LOC105371045A0A1W2PR82 267 aa21.59■■□□□ 1.05
SRL-203ENST00000572111 POLR3GLQ9BT43 218 aa21.44■■□□□ 1.02
SRL-203ENST00000572111 SCRIBQ14160 1630 aa21.44■■□□□ 1.02
SRL-203ENST00000572111 DAXXQ9UER7 740 aaPredicted RBP21.43■■□□□ 1.02
SRL-203ENST00000572111 FAM50AQ14320 339 aaKnown RBP21.33■■□□□ 1
SRL-203ENST00000572111 CNGB1Q14028 1251 aaPredicted RBP21.28■■□□□ 1
SRL-203ENST00000572111 SLC4A1APQ9BWU0 796 aaKnown RBP21.23■□□□□ 0.99
SRL-203ENST00000572111 CCDC180Q9P1Z9 1646 aa21.22■□□□□ 0.99
SRL-203ENST00000572111 DIEXFQ68CQ4 756 aaKnown RBP21.19■□□□□ 0.98
SRL-203ENST00000572111 TRIM52Q96A61 297 aa21.19■□□□□ 0.98
SRL-203ENST00000572111 ARID3CA6NKF2 412 aa21.17■□□□□ 0.98
SRL-203ENST00000572111 ZCCHC6Q5VYS8 1495 aaKnown RBP21.16■□□□□ 0.98
SRL-203ENST00000572111 P3H3Q8IVL6 736 aa21.15■□□□□ 0.98
SRL-203ENST00000572111 RTL5Q5HYW3 569 aaPredicted RBP21.08■□□□□ 0.96
SRL-203ENST00000572111 RB1CC1Q8TDY2 1594 aa21.08■□□□□ 0.96
SRL-203ENST00000572111 GTF3C3Q9Y5Q9 886 aa21■□□□□ 0.95
SRL-203ENST00000572111 BCANQ96GW7 911 aa20.98■□□□□ 0.95
SRL-203ENST00000572111 ZNF316A6NFI3 1004 aaPredicted RBP20.98■□□□□ 0.95
SRL-203ENST00000572111 CSRNP3Q8WYN3 585 aa20.96■□□□□ 0.95
SRL-203ENST00000572111 ZNF777Q9ULD5 760 aaPredicted RBP20.93■□□□□ 0.94
SRL-203ENST00000572111 NPM1P06748 294 aaKnown RBP eCLIP20.91■□□□□ 0.94
SRL-203ENST00000572111 NEUROD1Q13562 356 aa20.91■□□□□ 0.94
SRL-203ENST00000572111 CLSPNQ9HAW4 1339 aa20.9■□□□□ 0.94
SRL-203ENST00000572111 ZNF326Q5BKZ1 582 aaKnown RBP20.88■□□□□ 0.93
SRL-203ENST00000572111 CDK11AQ9UQ88 783 aaPredicted RBP20.87■□□□□ 0.93
SRL-203ENST00000572111 ESF1Q9H501 851 aaKnown RBP20.81■□□□□ 0.92
SRL-203ENST00000572111 NACADO15069 1562 aa20.76■□□□□ 0.91
SRL-203ENST00000572111 CHMP7Q8WUX9 453 aaPredicted RBP20.76■□□□□ 0.91
SRL-203ENST00000572111 PLPPR3Q6T4P5 718 aa20.76■□□□□ 0.91
SRL-203ENST00000572111 ACIN1Q9UKV3 1341 aaKnown RBP20.61■□□□□ 0.89
SRL-203ENST00000572111 ANP32CO43423 234 aa20.6■□□□□ 0.89
SRL-203ENST00000572111 STAG3Q9UJ98 1225 aa20.6■□□□□ 0.89
SRL-203ENST00000572111 BAZ1BQ9UIG0 1483 aaKnown RBP20.58■□□□□ 0.88
SRL-203ENST00000572111 ERCC6Q03468 1493 aa20.56■□□□□ 0.88
SRL-203ENST00000572111 CHGAP10645 457 aaKnown RBP20.56■□□□□ 0.88
SRL-203ENST00000572111 SLC24A1O60721 1099 aa20.48■□□□□ 0.87
SRL-203ENST00000572111 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.43■□□□□ 0.86
SRL-203ENST00000572111 RSF1Q96T23 1441 aaPredicted RBP20.41■□□□□ 0.86
SRL-203ENST00000572111 KCNH8Q96L42 1107 aa20.39■□□□□ 0.86
SRL-203ENST00000572111 CHIC2Q9UKJ5 165 aa20.39■□□□□ 0.85
SRL-203ENST00000572111 BCL11AQ9H165 835 aa20.35■□□□□ 0.85
SRL-203ENST00000572111 NEFMP07197 916 aa20.35■□□□□ 0.85
SRL-203ENST00000572111 TSPY4P0CV99 314 aa20.34■□□□□ 0.85
SRL-203ENST00000572111 TSPY10P0CW01 314 aa20.34■□□□□ 0.85
SRL-203ENST00000572111 NPM2Q86SE8 214 aaKnown RBP20.34■□□□□ 0.85
SRL-203ENST00000572111 ANP32AP39687 249 aaKnown RBP20.33■□□□□ 0.85
SRL-203ENST00000572111 MTUS2Q5JR59 1369 aa20.33■□□□□ 0.85
SRL-203ENST00000572111 CANXP27824 592 aaKnown RBP20.31■□□□□ 0.84
SRL-203ENST00000572111 ZBTB47Q9UFB7 747 aaPredicted RBP20.29■□□□□ 0.84
SRL-203ENST00000572111 FKBP8Q14318 412 aa20.27■□□□□ 0.84
SRL-203ENST00000572111 WRNQ14191 1432 aaPredicted RBP eCLIP20.26■□□□□ 0.83
SRL-203ENST00000572111 PLEKHD1A6NEE1 506 aa20.25■□□□□ 0.83
SRL-203ENST00000572111 BAZ1AQ9NRL2 1556 aaPredicted RBP20.24■□□□□ 0.83
SRL-203ENST00000572111 EIF5BO60841 1220 aaKnown RBP20.23■□□□□ 0.83
SRL-203ENST00000572111 TONSLQ96HA7 1378 aa20.2■□□□□ 0.82
SRL-203ENST00000572111 ARID4BQ4LE39 1312 aaPredicted RBP20.19■□□□□ 0.82
SRL-203ENST00000572111 CLIP1P30622 1438 aa20.19■□□□□ 0.82
SRL-203ENST00000572111 KIF27Q86VH2 1401 aa20.18■□□□□ 0.82
SRL-203ENST00000572111 CECR2Q9BXF3 1484 aa20.16■□□□□ 0.82
SRL-203ENST00000572111 DCAF1Q9Y4B6 1507 aa20.15■□□□□ 0.82
SRL-203ENST00000572111 SENP3Q9H4L4 574 aaPredicted RBP20.12■□□□□ 0.81
SRL-203ENST00000572111 TRHP20396 242 aaPredicted RBP20.1■□□□□ 0.81
SRL-203ENST00000572111 SCAF1Q9H7N4 1312 aaKnown RBP20.09■□□□□ 0.81
SRL-203ENST00000572111 KDM2AQ9Y2K7 1162 aa20.09■□□□□ 0.81
SRL-203ENST00000572111 GOLGA3Q08378 1498 aa20.09■□□□□ 0.81
SRL-203ENST00000572111 EEA1Q15075 1411 aa20.08■□□□□ 0.81
SRL-203ENST00000572111 PPP1R15AO75807 674 aaPredicted RBP20.08■□□□□ 0.8
SRL-203ENST00000572111 RRP7BPQ9NSQ0 103 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms