RNA–Protein interactions for RNA: ENST00000572007.1

LINC01896-204, Transcript of long intergenic non-protein coding RNA 1896, humanhuman

TSL 3

Gene LINC01896, Length 471 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01896-204ENST00000572007 AEBP2Q6ZN18 517 aaPredicted RBP27.77■■■□□ 2.04
LINC01896-204ENST00000572007 CHIC1Q5VXU3 224 aa27.3■■□□□ 1.96
LINC01896-204ENST00000572007 PHF23Q9BUL5 403 aaPredicted RBP24.18■■□□□ 1.46
LINC01896-204ENST00000572007 NISCHQ9Y2I1 1504 aa23.59■■□□□ 1.37
LINC01896-204ENST00000572007 SENP3Q9H4L4 574 aaPredicted RBP23.27■■□□□ 1.32
LINC01896-204ENST00000572007 PLPPR3Q6T4P5 718 aa22.22■■□□□ 1.15
LINC01896-204ENST00000572007 FOXD1Q16676 465 aa21.71■■□□□ 1.07
LINC01896-204ENST00000572007 PPP6R1Q9UPN7 881 aa21.24■□□□□ 0.99
LINC01896-204ENST00000572007 ADRA2BP18089 450 aa21.19■□□□□ 0.98
LINC01896-204ENST00000572007 CCDC180Q9P1Z9 1646 aa20.98■□□□□ 0.95
LINC01896-204ENST00000572007 ABCC9O60706 1549 aa20.97■□□□□ 0.95
LINC01896-204ENST00000572007 PIAS4Q8N2W9 510 aaPredicted RBP20.46■□□□□ 0.87
LINC01896-204ENST00000572007 RB1CC1Q8TDY2 1594 aa19.95■□□□□ 0.78
LINC01896-204ENST00000572007 DCAF8L2P0C7V8 631 aa19.93■□□□□ 0.78
LINC01896-204ENST00000572007 NACADO15069 1562 aa19.87■□□□□ 0.77
LINC01896-204ENST00000572007 KCNA4P22459 653 aa19.72■□□□□ 0.75
LINC01896-204ENST00000572007 PPP4R3CPQ6ZMV5 832 aa19.71■□□□□ 0.75
LINC01896-204ENST00000572007 MSH5O43196 834 aa19.69■□□□□ 0.74
LINC01896-204ENST00000572007 MYO15BQ96JP2 1530 aa19.65■□□□□ 0.74
LINC01896-204ENST00000572007 PABPN1Q86U42 306 aaKnown RBP eCLIP19.61■□□□□ 0.73
LINC01896-204ENST00000572007 ZCCHC6Q5VYS8 1495 aaKnown RBP19.6■□□□□ 0.73
LINC01896-204ENST00000572007 DNAJC5BQ9UF47 199 aa19.56■□□□□ 0.72
LINC01896-204ENST00000572007 DCAF1Q9Y4B6 1507 aa19.46■□□□□ 0.71
LINC01896-204ENST00000572007 UNC13AQ9UPW8 1703 aa19.39■□□□□ 0.69
LINC01896-204ENST00000572007 BICRAQ9NZM4 1560 aa19.38■□□□□ 0.69
LINC01896-204ENST00000572007 SCRIBQ14160 1630 aa19.22■□□□□ 0.67
LINC01896-204ENST00000572007 MAPK8IP2Q13387 824 aaPredicted RBP19.17■□□□□ 0.66
LINC01896-204ENST00000572007 NCBP3Q53F19 620 aaKnown RBP19.12■□□□□ 0.65
LINC01896-204ENST00000572007 SHROOM4Q9ULL8 1493 aa19.11■□□□□ 0.65
LINC01896-204ENST00000572007 SCAF1Q9H7N4 1312 aaKnown RBP19.1■□□□□ 0.65
LINC01896-204ENST00000572007 NPM3O75607 178 aaKnown RBP19.05■□□□□ 0.64
LINC01896-204ENST00000572007 CNKSR2Q8WXI2 1034 aa19.01■□□□□ 0.63
LINC01896-204ENST00000572007 EIF4G1Q04637 1599 aaKnown RBP18.89■□□□□ 0.62
LINC01896-204ENST00000572007 CC2D2AQ9P2K1 1620 aa18.88■□□□□ 0.61
LINC01896-204ENST00000572007 CECR2Q9BXF3 1484 aa18.85■□□□□ 0.61
LINC01896-204ENST00000572007 SLC4A1APQ9BWU0 796 aaKnown RBP18.73■□□□□ 0.59
LINC01896-204ENST00000572007 DMRT2Q9Y5R5 561 aa18.69■□□□□ 0.58
LINC01896-204ENST00000572007 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
LINC01896-204ENST00000572007 RNF216Q9NWF9 866 aaPredicted RBP18.56■□□□□ 0.56
LINC01896-204ENST00000572007 HOXD11P31277 338 aaPredicted RBP18.45■□□□□ 0.54
LINC01896-204ENST00000572007 NCAPD3P42695 1498 aa18.39■□□□□ 0.53
LINC01896-204ENST00000572007 ATAD2BQ9ULI0 1458 aa18.37■□□□□ 0.53
LINC01896-204ENST00000572007 CSRNP3Q8WYN3 585 aa18.33■□□□□ 0.52
LINC01896-204ENST00000572007 SMARCA4P51532 1647 aa18.33■□□□□ 0.52
LINC01896-204ENST00000572007 BAZ1AQ9NRL2 1556 aaPredicted RBP18.28■□□□□ 0.52
LINC01896-204ENST00000572007 SMARCA2P51531 1590 aa18.27■□□□□ 0.52
LINC01896-204ENST00000572007 ZBTB22O15209 634 aa18.24■□□□□ 0.51
LINC01896-204ENST00000572007 HMGXB3Q12766 1538 aa18.22■□□□□ 0.51
LINC01896-204ENST00000572007 MROH2BQ7Z745 1585 aa18.21■□□□□ 0.51
LINC01896-204ENST00000572007 BAZ1BQ9UIG0 1483 aaKnown RBP18.18■□□□□ 0.5
LINC01896-204ENST00000572007 PEG3Q9GZU2 1588 aa18.14■□□□□ 0.49
LINC01896-204ENST00000572007 ERCC6Q03468 1493 aa18.07■□□□□ 0.48
LINC01896-204ENST00000572007 NESP48681 1621 aa18.05■□□□□ 0.48
LINC01896-204ENST00000572007 SLC4A2P04920 1241 aa17.97■□□□□ 0.47
LINC01896-204ENST00000572007 CUX2O14529 1486 aa17.95■□□□□ 0.46
LINC01896-204ENST00000572007 WIZO95785 1651 aa17.94■□□□□ 0.46
LINC01896-204ENST00000572007 FOXD4L1Q9NU39 408 aa17.93■□□□□ 0.46
LINC01896-204ENST00000572007 RSF1Q96T23 1441 aaPredicted RBP17.91■□□□□ 0.46
LINC01896-204ENST00000572007 LAMC3Q9Y6N6 1575 aa17.88■□□□□ 0.45
LINC01896-204ENST00000572007 CADPSQ9ULU8 1353 aa17.86■□□□□ 0.45
LINC01896-204ENST00000572007 PDS5BQ9NTI5 1447 aa17.83■□□□□ 0.45
LINC01896-204ENST00000572007 DCAF8L1A6NGE4 600 aa17.82■□□□□ 0.44
LINC01896-204ENST00000572007 DNAJC5Q9H3Z4 198 aa17.79■□□□□ 0.44
LINC01896-204ENST00000572007 THOC2Q8NI27 1593 aaKnown RBP17.77■□□□□ 0.44
LINC01896-204ENST00000572007 TOP2AP11388 1531 aaKnown RBP17.75■□□□□ 0.43
LINC01896-204ENST00000572007 KIF21AQ7Z4S6 1674 aa17.71■□□□□ 0.42
LINC01896-204ENST00000572007 CFTRP13569 1480 aa17.67■□□□□ 0.42
LINC01896-204ENST00000572007 MRC2Q9UBG0 1479 aa17.66■□□□□ 0.42
LINC01896-204ENST00000572007 FANCD2Q9BXW9 1451 aa17.64■□□□□ 0.41
LINC01896-204ENST00000572007 CEP164Q9UPV0 1460 aa17.63■□□□□ 0.41
LINC01896-204ENST00000572007 WDR62O43379 1518 aa17.59■□□□□ 0.41
LINC01896-204ENST00000572007 CCDC88BA6NC98 1476 aa17.58■□□□□ 0.41
LINC01896-204ENST00000572007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.51■□□□□ 0.39
LINC01896-204ENST00000572007 POTEDQ86YR6 584 aa17.5■□□□□ 0.39
LINC01896-204ENST00000572007 URB2Q14146 1524 aaKnown RBP17.48■□□□□ 0.39
LINC01896-204ENST00000572007 MYCNP04198 464 aaPredicted RBP17.48■□□□□ 0.39
LINC01896-204ENST00000572007 U3KPZ7 1027 aaPredicted RBP17.39■□□□□ 0.37
LINC01896-204ENST00000572007 TOPBP1Q92547 1522 aa17.31■□□□□ 0.36
LINC01896-204ENST00000572007 PRDM2Q13029 1718 aa17.31■□□□□ 0.36
LINC01896-204ENST00000572007 SUPT5HO00267 1087 aaKnown RBP17.3■□□□□ 0.36
LINC01896-204ENST00000572007 IFT140Q96RY7 1462 aa17.28■□□□□ 0.36
LINC01896-204ENST00000572007 ABCC8Q09428 1581 aa17.26■□□□□ 0.35
LINC01896-204ENST00000572007 ZNF608Q9ULD9 1512 aaPredicted RBP17.26■□□□□ 0.35
LINC01896-204ENST00000572007 DNMBPQ6XZF7 1577 aa17.23■□□□□ 0.35
LINC01896-204ENST00000572007 OSCARQ8IYS5 282 aa17.21■□□□□ 0.35
LINC01896-204ENST00000572007 ATF5Q9Y2D1 282 aaPredicted RBP17.21■□□□□ 0.35
LINC01896-204ENST00000572007 ATXN8OSP0DMR3 200 aa17.2■□□□□ 0.34
LINC01896-204ENST00000572007 POLA1P09884 1462 aaPredicted RBP17.16■□□□□ 0.34
LINC01896-204ENST00000572007 AQRO60306 1485 aaKnown RBP eCLIP17.12■□□□□ 0.33
LINC01896-204ENST00000572007 RAD54L2Q9Y4B4 1467 aa17.12■□□□□ 0.33
LINC01896-204ENST00000572007 TRIM41Q8WV44 630 aa17.12■□□□□ 0.33
LINC01896-204ENST00000572007 SOGA1O94964 1423 aa17.1■□□□□ 0.33
LINC01896-204ENST00000572007 EIF4G3O43432 1585 aaKnown RBP17.1■□□□□ 0.33
LINC01896-204ENST00000572007 TARBP1Q13395 1621 aaKnown RBP17.1■□□□□ 0.33
LINC01896-204ENST00000572007 CUX1P39880 1505 aa17.09■□□□□ 0.33
LINC01896-204ENST00000572007 FGD5Q6ZNL6 1462 aa17.08■□□□□ 0.32
LINC01896-204ENST00000572007 TDRD9Q8NDG6 1382 aaKnown RBP17.07■□□□□ 0.32
LINC01896-204ENST00000572007 SAMD1Q6SPF0 538 aaPredicted RBP17.05■□□□□ 0.32
LINC01896-204ENST00000572007 RNF39Q9H2S5 420 aa17.03■□□□□ 0.32
LINC01896-204ENST00000572007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms