RNA–Protein interactions for RNA: ENST00000570276.5

ULK3-222, Transcript of unc-51 like kinase 3, humanhuman

TSL 1 (best)

Gene ULK3, Length 2,951 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ULK3-222ENST00000570276 NISCHQ9Y2I1 1504 aa33.41■■■□□ 2.94
ULK3-222ENST00000570276 SHROOM4Q9ULL8 1493 aa29.76■■■□□ 2.35
ULK3-222ENST00000570276 SUPT5HO00267 1087 aaKnown RBP29.41■■■□□ 2.3
ULK3-222ENST00000570276 DCAF8L2P0C7V8 631 aa28.7■■■□□ 2.19
ULK3-222ENST00000570276 HRCP23327 699 aa28.64■■■□□ 2.18
ULK3-222ENST00000570276 PPARGC1BQ86YN6 1023 aaKnown RBP28.63■■■□□ 2.17
ULK3-222ENST00000570276 CHIC1Q5VXU3 224 aa28.44■■■□□ 2.14
ULK3-222ENST00000570276 MYO15BQ96JP2 1530 aa28.42■■■□□ 2.14
ULK3-222ENST00000570276 PCGF6Q9BYE7 350 aa28.33■■■□□ 2.13
ULK3-222ENST00000570276 ZCCHC6Q5VYS8 1495 aaKnown RBP28.25■■■□□ 2.11
ULK3-222ENST00000570276 LOC105371045A0A1W2PR82 267 aa28■■■□□ 2.07
ULK3-222ENST00000570276 PELP1Q8IZL8 1130 aaKnown RBP27.99■■■□□ 2.07
ULK3-222ENST00000570276 CCDC180Q9P1Z9 1646 aa27.67■■■□□ 2.02
ULK3-222ENST00000570276 SCAF1Q9H7N4 1312 aaKnown RBP27.65■■■□□ 2.02
ULK3-222ENST00000570276 EHMT2Q96KQ7 1210 aa27.42■■□□□ 1.98
ULK3-222ENST00000570276 FAM9AQ8IZU1 332 aaPredicted RBP27.31■■□□□ 1.96
ULK3-222ENST00000570276 DCAF1Q9Y4B6 1507 aa27.29■■□□□ 1.96
ULK3-222ENST00000570276 TRIM26Q12899 539 aaPredicted RBP27.28■■□□□ 1.96
ULK3-222ENST00000570276 TRIM41Q8WV44 630 aa27.06■■□□□ 1.92
ULK3-222ENST00000570276 MYT1Q01538 1121 aa26.84■■□□□ 1.89
ULK3-222ENST00000570276 RSF1Q96T23 1441 aaPredicted RBP26.82■■□□□ 1.88
ULK3-222ENST00000570276 SCRIBQ14160 1630 aa26.75■■□□□ 1.87
ULK3-222ENST00000570276 NEUROD1Q13562 356 aa26.73■■□□□ 1.87
ULK3-222ENST00000570276 ABCC9O60706 1549 aa26.67■■□□□ 1.86
ULK3-222ENST00000570276 ZEB1P37275 1124 aaPredicted RBP26.64■■□□□ 1.86
ULK3-222ENST00000570276 GTF3C3Q9Y5Q9 886 aa26.64■■□□□ 1.85
ULK3-222ENST00000570276 RB1CC1Q8TDY2 1594 aa26.59■■□□□ 1.85
ULK3-222ENST00000570276 ACIN1Q9UKV3 1341 aaKnown RBP26.59■■□□□ 1.85
ULK3-222ENST00000570276 TTBK1Q5TCY1 1321 aaPredicted RBP26.56■■□□□ 1.84
ULK3-222ENST00000570276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.51■■□□□ 1.83
ULK3-222ENST00000570276 CECR2Q9BXF3 1484 aa26.41■■□□□ 1.82
ULK3-222ENST00000570276 CCER1Q8TC90 406 aaPredicted RBP26.33■■□□□ 1.81
ULK3-222ENST00000570276 MROH2BQ7Z745 1585 aa26.21■■□□□ 1.79
ULK3-222ENST00000570276 WIZO95785 1651 aa26.06■■□□□ 1.76
ULK3-222ENST00000570276 CENPBP07199 599 aaPredicted RBP26.05■■□□□ 1.76
ULK3-222ENST00000570276 YTHDC1Q96MU7 727 aaKnown RBP26.04■■□□□ 1.76
ULK3-222ENST00000570276 DIEXFQ68CQ4 756 aaKnown RBP25.98■■□□□ 1.75
ULK3-222ENST00000570276 UBTFP17480 764 aaKnown RBP25.84■■□□□ 1.73
ULK3-222ENST00000570276 BCL11AQ9H165 835 aa25.83■■□□□ 1.73
ULK3-222ENST00000570276 ABCC8Q09428 1581 aa25.83■■□□□ 1.73
ULK3-222ENST00000570276 CCDC88BA6NC98 1476 aa25.81■■□□□ 1.72
ULK3-222ENST00000570276 SOGA1O94964 1423 aa25.76■■□□□ 1.71
ULK3-222ENST00000570276 NACADO15069 1562 aa25.71■■□□□ 1.71
ULK3-222ENST00000570276 CEP162Q5TB80 1403 aa25.69■■□□□ 1.7
ULK3-222ENST00000570276 RANGAP1P46060 587 aaPredicted RBP25.68■■□□□ 1.7
ULK3-222ENST00000570276 HNRNPUL2Q1KMD3 747 aaKnown RBP25.68■■□□□ 1.7
ULK3-222ENST00000570276 RUSC2Q8N2Y8 1516 aa25.66■■□□□ 1.7
ULK3-222ENST00000570276 CSRNP3Q8WYN3 585 aa25.62■■□□□ 1.69
ULK3-222ENST00000570276 BAZ1AQ9NRL2 1556 aaPredicted RBP25.6■■□□□ 1.69
ULK3-222ENST00000570276 ZNF316A6NFI3 1004 aaPredicted RBP25.54■■□□□ 1.68
ULK3-222ENST00000570276 PABPN1Q86U42 306 aaKnown RBP eCLIP25.53■■□□□ 1.68
ULK3-222ENST00000570276 EIF4G1Q04637 1599 aaKnown RBP25.52■■□□□ 1.68
ULK3-222ENST00000570276 TNIKQ9UKE5 1360 aa25.47■■□□□ 1.67
ULK3-222ENST00000570276 WRNQ14191 1432 aaPredicted RBP eCLIP25.47■■□□□ 1.67
ULK3-222ENST00000570276 MIER1Q8N108 512 aa25.46■■□□□ 1.67
ULK3-222ENST00000570276 TOP2AP11388 1531 aaKnown RBP25.38■■□□□ 1.65
ULK3-222ENST00000570276 SMARCA2P51531 1590 aa25.36■■□□□ 1.65
ULK3-222ENST00000570276 ANP32EQ9BTT0 268 aa25.32■■□□□ 1.64
ULK3-222ENST00000570276 SMARCA4P51532 1647 aa25.28■■□□□ 1.64
ULK3-222ENST00000570276 APLP2Q06481 763 aa25.21■■□□□ 1.63
ULK3-222ENST00000570276 GOLGA3Q08378 1498 aa25.21■■□□□ 1.63
ULK3-222ENST00000570276 PRKCSHP14314 528 aaPredicted RBP25.17■■□□□ 1.62
ULK3-222ENST00000570276 CLIP1P30622 1438 aa25.13■■□□□ 1.61
ULK3-222ENST00000570276 TSHZ2Q9NRE2 1034 aa25.13■■□□□ 1.61
ULK3-222ENST00000570276 EEA1Q15075 1411 aa25.12■■□□□ 1.61
ULK3-222ENST00000570276 SUPT16HQ9Y5B9 1047 aaKnown RBP25.07■■□□□ 1.6
ULK3-222ENST00000570276 RAPGEF2Q9Y4G8 1499 aa24.99■■□□□ 1.59
ULK3-222ENST00000570276 CEP164Q9UPV0 1460 aa24.98■■□□□ 1.59
ULK3-222ENST00000570276 SYNJ1O43426 1573 aa24.97■■□□□ 1.59
ULK3-222ENST00000570276 ITGAEP38570 1179 aa24.96■■□□□ 1.59
ULK3-222ENST00000570276 VPS8Q8N3P4 1428 aa24.93■■□□□ 1.58
ULK3-222ENST00000570276 KANK4Q5T7N3 995 aaPredicted RBP24.93■■□□□ 1.58
ULK3-222ENST00000570276 BCANQ96GW7 911 aa24.93■■□□□ 1.58
ULK3-222ENST00000570276 UNC13AQ9UPW8 1703 aa24.91■■□□□ 1.58
ULK3-222ENST00000570276 KIF21BO75037 1637 aa24.78■■□□□ 1.56
ULK3-222ENST00000570276 DHX57Q6P158 1386 aaKnown RBP24.76■■□□□ 1.55
ULK3-222ENST00000570276 KCNH8Q96L42 1107 aa24.75■■□□□ 1.55
ULK3-222ENST00000570276 BICRAQ9NZM4 1560 aa24.72■■□□□ 1.55
ULK3-222ENST00000570276 ATAD2BQ9ULI0 1458 aa24.69■■□□□ 1.54
ULK3-222ENST00000570276 BAZ1BQ9UIG0 1483 aaKnown RBP24.67■■□□□ 1.54
ULK3-222ENST00000570276 ARAP1Q96P48 1450 aa24.55■■□□□ 1.52
ULK3-222ENST00000570276 HIRIP3Q9BW71 556 aaPredicted RBP24.54■■□□□ 1.52
ULK3-222ENST00000570276 ATP1B4Q9UN42 357 aaPredicted RBP24.5■■□□□ 1.51
ULK3-222ENST00000570276 PEG3Q9GZU2 1588 aa24.49■■□□□ 1.51
ULK3-222ENST00000570276 RBM19Q9Y4C8 960 aaKnown RBP24.49■■□□□ 1.51
ULK3-222ENST00000570276 SIN3AQ96ST3 1273 aa24.48■■□□□ 1.51
ULK3-222ENST00000570276 CLSPNQ9HAW4 1339 aa24.47■■□□□ 1.51
ULK3-222ENST00000570276 DDX10Q13206 875 aaKnown RBP24.46■■□□□ 1.51
ULK3-222ENST00000570276 P3H3Q8IVL6 736 aa24.46■■□□□ 1.51
ULK3-222ENST00000570276 PRXQ9BXM0 1461 aa24.44■■□□□ 1.5
ULK3-222ENST00000570276 FKBP8Q14318 412 aa24.43■■□□□ 1.5
ULK3-222ENST00000570276 MSH5O43196 834 aa24.43■■□□□ 1.5
ULK3-222ENST00000570276 CCNB3Q8WWL7 1395 aa24.42■■□□□ 1.5
ULK3-222ENST00000570276 FAM50AQ14320 339 aaKnown RBP24.41■■□□□ 1.5
ULK3-222ENST00000570276 TOP2BQ02880 1626 aa24.4■■□□□ 1.5
ULK3-222ENST00000570276 ANO8Q9HCE9 1232 aaPredicted RBP24.39■■□□□ 1.5
ULK3-222ENST00000570276 RAB3GAP2Q9H2M9 1393 aa24.37■■□□□ 1.49
ULK3-222ENST00000570276 RRBP1Q9P2E9 1410 aaKnown RBP24.34■■□□□ 1.49
ULK3-222ENST00000570276 KIF27Q86VH2 1401 aa24.31■■□□□ 1.48
ULK3-222ENST00000570276 ARHGAP35Q9NRY4 1499 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms