RNA–Protein interactions for RNA: ENST00000568298.1

ATP6V0D1-216, Transcript of ATPase H+ transporting V0 subunit d1, humanhuman

TSL 2

Gene ATP6V0D1, Length 3,274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0D1-216ENST00000568298 NISCHQ9Y2I1 1504 aa21.64■■□□□ 1.06
ATP6V0D1-216ENST00000568298 DCAF8L2P0C7V8 631 aa18.83■□□□□ 0.6
ATP6V0D1-216ENST00000568298 SHROOM4Q9ULL8 1493 aa18.82■□□□□ 0.6
ATP6V0D1-216ENST00000568298 SUPT5HO00267 1087 aaKnown RBP18.72■□□□□ 0.59
ATP6V0D1-216ENST00000568298 CCDC180Q9P1Z9 1646 aa18.39■□□□□ 0.53
ATP6V0D1-216ENST00000568298 PCGF6Q9BYE7 350 aa18.14■□□□□ 0.49
ATP6V0D1-216ENST00000568298 ZCCHC6Q5VYS8 1495 aaKnown RBP18.13■□□□□ 0.49
ATP6V0D1-216ENST00000568298 HRCP23327 699 aa18.06■□□□□ 0.48
ATP6V0D1-216ENST00000568298 ABCC9O60706 1549 aa18.06■□□□□ 0.48
ATP6V0D1-216ENST00000568298 PPARGC1BQ86YN6 1023 aaKnown RBP18■□□□□ 0.47
ATP6V0D1-216ENST00000568298 CHIC1Q5VXU3 224 aa17.94■□□□□ 0.46
ATP6V0D1-216ENST00000568298 MYO15BQ96JP2 1530 aa17.78■□□□□ 0.44
ATP6V0D1-216ENST00000568298 LOC105371045A0A1W2PR82 267 aa17.73■□□□□ 0.43
ATP6V0D1-216ENST00000568298 EHMT2Q96KQ7 1210 aa17.56■□□□□ 0.4
ATP6V0D1-216ENST00000568298 SCRIBQ14160 1630 aa17.56■□□□□ 0.4
ATP6V0D1-216ENST00000568298 DCAF1Q9Y4B6 1507 aa17.49■□□□□ 0.39
ATP6V0D1-216ENST00000568298 FAM9AQ8IZU1 332 aaPredicted RBP17.43■□□□□ 0.38
ATP6V0D1-216ENST00000568298 TRIM26Q12899 539 aaPredicted RBP17.4■□□□□ 0.38
ATP6V0D1-216ENST00000568298 PABPN1Q86U42 306 aaKnown RBP eCLIP17.34■□□□□ 0.37
ATP6V0D1-216ENST00000568298 NACADO15069 1562 aa17.25■□□□□ 0.35
ATP6V0D1-216ENST00000568298 TRIM41Q8WV44 630 aa17.21■□□□□ 0.35
ATP6V0D1-216ENST00000568298 RB1CC1Q8TDY2 1594 aa17.16■□□□□ 0.34
ATP6V0D1-216ENST00000568298 ZEB1P37275 1124 aaPredicted RBP17.14■□□□□ 0.33
ATP6V0D1-216ENST00000568298 CECR2Q9BXF3 1484 aa17.12■□□□□ 0.33
ATP6V0D1-216ENST00000568298 TTBK1Q5TCY1 1321 aaPredicted RBP17.03■□□□□ 0.32
ATP6V0D1-216ENST00000568298 RSF1Q96T23 1441 aaPredicted RBP17.03■□□□□ 0.32
ATP6V0D1-216ENST00000568298 SCAF1Q9H7N4 1312 aaKnown RBP17.02■□□□□ 0.32
ATP6V0D1-216ENST00000568298 PELP1Q8IZL8 1130 aaKnown RBP16.96■□□□□ 0.31
ATP6V0D1-216ENST00000568298 CCER1Q8TC90 406 aaPredicted RBP16.92■□□□□ 0.3
ATP6V0D1-216ENST00000568298 MROH2BQ7Z745 1585 aa16.91■□□□□ 0.3
ATP6V0D1-216ENST00000568298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.91■□□□□ 0.3
ATP6V0D1-216ENST00000568298 UNC13AQ9UPW8 1703 aa16.85■□□□□ 0.29
ATP6V0D1-216ENST00000568298 WIZO95785 1651 aa16.79■□□□□ 0.28
ATP6V0D1-216ENST00000568298 BICRAQ9NZM4 1560 aa16.72■□□□□ 0.27
ATP6V0D1-216ENST00000568298 NEUROD1Q13562 356 aa16.69■□□□□ 0.26
ATP6V0D1-216ENST00000568298 CENPBP07199 599 aaPredicted RBP16.67■□□□□ 0.26
ATP6V0D1-216ENST00000568298 ACIN1Q9UKV3 1341 aaKnown RBP16.66■□□□□ 0.26
ATP6V0D1-216ENST00000568298 DIEXFQ68CQ4 756 aaKnown RBP16.66■□□□□ 0.26
ATP6V0D1-216ENST00000568298 GTF3C3Q9Y5Q9 886 aa16.66■□□□□ 0.26
ATP6V0D1-216ENST00000568298 YTHDC1Q96MU7 727 aaKnown RBP16.65■□□□□ 0.26
ATP6V0D1-216ENST00000568298 BAZ1AQ9NRL2 1556 aaPredicted RBP16.63■□□□□ 0.25
ATP6V0D1-216ENST00000568298 SMARCA4P51532 1647 aa16.57■□□□□ 0.24
ATP6V0D1-216ENST00000568298 UBTFP17480 764 aaKnown RBP16.5■□□□□ 0.23
ATP6V0D1-216ENST00000568298 MYT1Q01538 1121 aa16.45■□□□□ 0.22
ATP6V0D1-216ENST00000568298 CCDC88BA6NC98 1476 aa16.44■□□□□ 0.22
ATP6V0D1-216ENST00000568298 RANGAP1P46060 587 aaPredicted RBP16.43■□□□□ 0.22
ATP6V0D1-216ENST00000568298 HNRNPUL2Q1KMD3 747 aaKnown RBP16.41■□□□□ 0.22
ATP6V0D1-216ENST00000568298 TOP2AP11388 1531 aaKnown RBP16.36■□□□□ 0.21
ATP6V0D1-216ENST00000568298 ATAD2BQ9ULI0 1458 aa16.35■□□□□ 0.21
ATP6V0D1-216ENST00000568298 ABCC8Q09428 1581 aa16.33■□□□□ 0.21
ATP6V0D1-216ENST00000568298 BAZ1BQ9UIG0 1483 aaKnown RBP16.33■□□□□ 0.2
ATP6V0D1-216ENST00000568298 ZNF316A6NFI3 1004 aaPredicted RBP16.33■□□□□ 0.2
ATP6V0D1-216ENST00000568298 SMARCA2P51531 1590 aa16.3■□□□□ 0.2
ATP6V0D1-216ENST00000568298 EIF4G1Q04637 1599 aaKnown RBP16.26■□□□□ 0.19
ATP6V0D1-216ENST00000568298 APLP2Q06481 763 aa16.25■□□□□ 0.19
ATP6V0D1-216ENST00000568298 MIER1Q8N108 512 aa16.23■□□□□ 0.19
ATP6V0D1-216ENST00000568298 DNAJC5BQ9UF47 199 aa16.2■□□□□ 0.18
ATP6V0D1-216ENST00000568298 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
ATP6V0D1-216ENST00000568298 CEP162Q5TB80 1403 aa16.17■□□□□ 0.18
ATP6V0D1-216ENST00000568298 SOGA1O94964 1423 aa16.11■□□□□ 0.17
ATP6V0D1-216ENST00000568298 PEG3Q9GZU2 1588 aa16.09■□□□□ 0.17
ATP6V0D1-216ENST00000568298 RUSC2Q8N2Y8 1516 aa16.07■□□□□ 0.16
ATP6V0D1-216ENST00000568298 WRNQ14191 1432 aaPredicted RBP eCLIP16.04■□□□□ 0.16
ATP6V0D1-216ENST00000568298 NCAPD3P42695 1498 aa16.04■□□□□ 0.16
ATP6V0D1-216ENST00000568298 CC2D2AQ9P2K1 1620 aa16.03■□□□□ 0.16
ATP6V0D1-216ENST00000568298 TNIKQ9UKE5 1360 aa16.01■□□□□ 0.15
ATP6V0D1-216ENST00000568298 ITGAEP38570 1179 aa15.99■□□□□ 0.15
ATP6V0D1-216ENST00000568298 BCL11AQ9H165 835 aa15.93■□□□□ 0.14
ATP6V0D1-216ENST00000568298 SYNJ1O43426 1573 aa15.92■□□□□ 0.14
ATP6V0D1-216ENST00000568298 HMGXB3Q12766 1538 aa15.89■□□□□ 0.13
ATP6V0D1-216ENST00000568298 NESP48681 1621 aa15.88■□□□□ 0.13
ATP6V0D1-216ENST00000568298 BCANQ96GW7 911 aa15.88■□□□□ 0.13
ATP6V0D1-216ENST00000568298 GOLGA3Q08378 1498 aa15.86■□□□□ 0.13
ATP6V0D1-216ENST00000568298 CLIP1P30622 1438 aa15.85■□□□□ 0.13
ATP6V0D1-216ENST00000568298 CADPSQ9ULU8 1353 aa15.83■□□□□ 0.12
ATP6V0D1-216ENST00000568298 CFTRP13569 1480 aa15.8■□□□□ 0.12
ATP6V0D1-216ENST00000568298 EEA1Q15075 1411 aa15.79■□□□□ 0.12
ATP6V0D1-216ENST00000568298 SUPT16HQ9Y5B9 1047 aaKnown RBP15.79■□□□□ 0.12
ATP6V0D1-216ENST00000568298 CUX1P39880 1505 aa15.74■□□□□ 0.11
ATP6V0D1-216ENST00000568298 ATP1B4Q9UN42 357 aaPredicted RBP15.72■□□□□ 0.11
ATP6V0D1-216ENST00000568298 CEP164Q9UPV0 1460 aa15.7■□□□□ 0.1
ATP6V0D1-216ENST00000568298 FANCD2Q9BXW9 1451 aa15.69■□□□□ 0.1
ATP6V0D1-216ENST00000568298 RAPGEF2Q9Y4G8 1499 aa15.68■□□□□ 0.1
ATP6V0D1-216ENST00000568298 VPS8Q8N3P4 1428 aa15.68■□□□□ 0.1
ATP6V0D1-216ENST00000568298 KCNH8Q96L42 1107 aa15.68■□□□□ 0.1
ATP6V0D1-216ENST00000568298 KANK4Q5T7N3 995 aaPredicted RBP15.67■□□□□ 0.1
ATP6V0D1-216ENST00000568298 TOP2BQ02880 1626 aa15.65■□□□□ 0.1
ATP6V0D1-216ENST00000568298 FKBP8Q14318 412 aa15.65■□□□□ 0.1
ATP6V0D1-216ENST00000568298 DDX10Q13206 875 aaKnown RBP15.64■□□□□ 0.09
ATP6V0D1-216ENST00000568298 HIRIP3Q9BW71 556 aaPredicted RBP15.64■□□□□ 0.09
ATP6V0D1-216ENST00000568298 CUX2O14529 1486 aa15.63■□□□□ 0.09
ATP6V0D1-216ENST00000568298 NEFLP07196 543 aa15.63■□□□□ 0.09
ATP6V0D1-216ENST00000568298 RAD54L2Q9Y4B4 1467 aa15.62■□□□□ 0.09
ATP6V0D1-216ENST00000568298 P3H3Q8IVL6 736 aa15.62■□□□□ 0.09
ATP6V0D1-216ENST00000568298 TSHZ2Q9NRE2 1034 aa15.62■□□□□ 0.09
ATP6V0D1-216ENST00000568298 DHX57Q6P158 1386 aaKnown RBP15.6■□□□□ 0.09
ATP6V0D1-216ENST00000568298 FGD5Q6ZNL6 1462 aa15.6■□□□□ 0.09
ATP6V0D1-216ENST00000568298 FAM50AQ14320 339 aaKnown RBP15.58■□□□□ 0.09
ATP6V0D1-216ENST00000568298 KIF27Q86VH2 1401 aa15.58■□□□□ 0.08
ATP6V0D1-216ENST00000568298 TDRD9Q8NDG6 1382 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms