RNA–Protein interactions for RNA: ENST00000567560.5

MYO9A-216, Transcript of myosin IXA, humanhuman

TSL 1 (best)

Gene MYO9A, Length 4,056 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYO9A-216ENST00000567560 NISCHQ9Y2I1 1504 aa25.86■■□□□ 1.73
MYO9A-216ENST00000567560 DCAF8L2P0C7V8 631 aa24.86■■□□□ 1.57
MYO9A-216ENST00000567560 SUPT5HO00267 1087 aaKnown RBP24.68■■□□□ 1.54
MYO9A-216ENST00000567560 SHROOM4Q9ULL8 1493 aa24.53■■□□□ 1.52
MYO9A-216ENST00000567560 EHMT2Q96KQ7 1210 aa23.85■■□□□ 1.41
MYO9A-216ENST00000567560 PCGF6Q9BYE7 350 aa23.82■■□□□ 1.4
MYO9A-216ENST00000567560 FAM9AQ8IZU1 332 aaPredicted RBP23.23■■□□□ 1.31
MYO9A-216ENST00000567560 PPARGC1BQ86YN6 1023 aaKnown RBP23.15■■□□□ 1.3
MYO9A-216ENST00000567560 TTBK1Q5TCY1 1321 aaPredicted RBP23.07■■□□□ 1.28
MYO9A-216ENST00000567560 HRCP23327 699 aa23.02■■□□□ 1.28
MYO9A-216ENST00000567560 LOC105371045A0A1W2PR82 267 aa22.86■■□□□ 1.25
MYO9A-216ENST00000567560 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
MYO9A-216ENST00000567560 CCER1Q8TC90 406 aaPredicted RBP22.52■■□□□ 1.2
MYO9A-216ENST00000567560 TRIM41Q8WV44 630 aa22.49■■□□□ 1.19
MYO9A-216ENST00000567560 YTHDC1Q96MU7 727 aaKnown RBP22.47■■□□□ 1.19
MYO9A-216ENST00000567560 TRIM26Q12899 539 aaPredicted RBP22.41■■□□□ 1.18
MYO9A-216ENST00000567560 ZEB1P37275 1124 aaPredicted RBP22.37■■□□□ 1.17
MYO9A-216ENST00000567560 PELP1Q8IZL8 1130 aaKnown RBP22.36■■□□□ 1.17
MYO9A-216ENST00000567560 RANGAP1P46060 587 aaPredicted RBP22.32■■□□□ 1.16
MYO9A-216ENST00000567560 CENPBP07199 599 aaPredicted RBP22.31■■□□□ 1.16
MYO9A-216ENST00000567560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.09■■□□□ 1.13
MYO9A-216ENST00000567560 APLP2Q06481 763 aa22.03■■□□□ 1.12
MYO9A-216ENST00000567560 UBTFP17480 764 aaKnown RBP21.93■■□□□ 1.1
MYO9A-216ENST00000567560 GTF3C3Q9Y5Q9 886 aa21.82■■□□□ 1.08
MYO9A-216ENST00000567560 DIEXFQ68CQ4 756 aaKnown RBP21.79■■□□□ 1.08
MYO9A-216ENST00000567560 CCDC180Q9P1Z9 1646 aa21.78■■□□□ 1.08
MYO9A-216ENST00000567560 MYO15BQ96JP2 1530 aa21.77■■□□□ 1.08
MYO9A-216ENST00000567560 HNRNPUL2Q1KMD3 747 aaKnown RBP21.74■■□□□ 1.07
MYO9A-216ENST00000567560 ZCCHC6Q5VYS8 1495 aaKnown RBP21.65■■□□□ 1.06
MYO9A-216ENST00000567560 SCAF1Q9H7N4 1312 aaKnown RBP21.61■■□□□ 1.05
MYO9A-216ENST00000567560 ABCC9O60706 1549 aa21.58■■□□□ 1.04
MYO9A-216ENST00000567560 MYT1Q01538 1121 aa21.53■■□□□ 1.04
MYO9A-216ENST00000567560 ITGAEP38570 1179 aa21.52■■□□□ 1.04
MYO9A-216ENST00000567560 ATP1B4Q9UN42 357 aaPredicted RBP21.51■■□□□ 1.03
MYO9A-216ENST00000567560 ACIN1Q9UKV3 1341 aaKnown RBP21.5■■□□□ 1.03
MYO9A-216ENST00000567560 NEUROD1Q13562 356 aa21.46■■□□□ 1.03
MYO9A-216ENST00000567560 ERICH6Q7L0X2 663 aa21.45■■□□□ 1.02
MYO9A-216ENST00000567560 BCANQ96GW7 911 aa21.34■■□□□ 1.01
MYO9A-216ENST00000567560 NEFLP07196 543 aa21.32■■□□□ 1
MYO9A-216ENST00000567560 CNGB1Q14028 1251 aaPredicted RBP21.2■□□□□ 0.98
MYO9A-216ENST00000567560 ZNF316A6NFI3 1004 aaPredicted RBP21.15■□□□□ 0.98
MYO9A-216ENST00000567560 DCAF1Q9Y4B6 1507 aa21.11■□□□□ 0.97
MYO9A-216ENST00000567560 PABPN1Q86U42 306 aaKnown RBP eCLIP21.04■□□□□ 0.96
MYO9A-216ENST00000567560 SCRIBQ14160 1630 aa21.03■□□□□ 0.96
MYO9A-216ENST00000567560 MIER1Q8N108 512 aa20.93■□□□□ 0.94
MYO9A-216ENST00000567560 POLR3GLQ9BT43 218 aa20.9■□□□□ 0.94
MYO9A-216ENST00000567560 CSRNP3Q8WYN3 585 aa20.78■□□□□ 0.92
MYO9A-216ENST00000567560 FAM50AQ14320 339 aaKnown RBP20.72■□□□□ 0.91
MYO9A-216ENST00000567560 FKBP8Q14318 412 aa20.68■□□□□ 0.9
MYO9A-216ENST00000567560 RSF1Q96T23 1441 aaPredicted RBP20.63■□□□□ 0.89
MYO9A-216ENST00000567560 HIRIP3Q9BW71 556 aaPredicted RBP20.59■□□□□ 0.89
MYO9A-216ENST00000567560 P3H3Q8IVL6 736 aa20.58■□□□□ 0.89
MYO9A-216ENST00000567560 TRIM52Q96A61 297 aa20.57■□□□□ 0.88
MYO9A-216ENST00000567560 DDX10Q13206 875 aaKnown RBP20.57■□□□□ 0.88
MYO9A-216ENST00000567560 NACADO15069 1562 aa20.53■□□□□ 0.88
MYO9A-216ENST00000567560 ANP32CO43423 234 aa20.49■□□□□ 0.87
MYO9A-216ENST00000567560 IRX6P78412 446 aaPredicted RBP20.47■□□□□ 0.87
MYO9A-216ENST00000567560 CECR2Q9BXF3 1484 aa20.47■□□□□ 0.87
MYO9A-216ENST00000567560 RB1CC1Q8TDY2 1594 aa20.44■□□□□ 0.86
MYO9A-216ENST00000567560 CDK11AQ9UQ88 783 aaPredicted RBP20.42■□□□□ 0.86
MYO9A-216ENST00000567560 ARID3CA6NKF2 412 aa20.37■□□□□ 0.85
MYO9A-216ENST00000567560 RTL5Q5HYW3 569 aaPredicted RBP20.37■□□□□ 0.85
MYO9A-216ENST00000567560 ZNF326Q5BKZ1 582 aaKnown RBP20.31■□□□□ 0.84
MYO9A-216ENST00000567560 CEP162Q5TB80 1403 aa20.31■□□□□ 0.84
MYO9A-216ENST00000567560 SENP3-EIF4A1A0A087X0R7 540 aa20.3■□□□□ 0.84
MYO9A-216ENST00000567560 HNRNPUQ00839 825 aaKnown RBP eCLIP20.3■□□□□ 0.84
MYO9A-216ENST00000567560 DAXXQ9UER7 740 aaPredicted RBP20.29■□□□□ 0.84
MYO9A-216ENST00000567560 SUPT16HQ9Y5B9 1047 aaKnown RBP20.27■□□□□ 0.84
MYO9A-216ENST00000567560 NBR1Q14596 966 aa20.24■□□□□ 0.83
MYO9A-216ENST00000567560 MROH2BQ7Z745 1585 aa20.21■□□□□ 0.83
MYO9A-216ENST00000567560 NPM2Q86SE8 214 aaKnown RBP20.21■□□□□ 0.83
MYO9A-216ENST00000567560 ANP32EQ9BTT0 268 aa20.21■□□□□ 0.83
MYO9A-216ENST00000567560 FAM9BQ8IZU0 186 aa20.2■□□□□ 0.82
MYO9A-216ENST00000567560 SOGA1O94964 1423 aa20.19■□□□□ 0.82
MYO9A-216ENST00000567560 CLIP1P30622 1438 aa20.13■□□□□ 0.81
MYO9A-216ENST00000567560 SALL2Q9Y467 1007 aaPredicted RBP20.11■□□□□ 0.81
MYO9A-216ENST00000567560 CLSPNQ9HAW4 1339 aa20.07■□□□□ 0.8
MYO9A-216ENST00000567560 SIN3AQ96ST3 1273 aa20.07■□□□□ 0.8
MYO9A-216ENST00000567560 WIZO95785 1651 aa20.05■□□□□ 0.8
MYO9A-216ENST00000567560 BCL11AQ9H165 835 aa20.03■□□□□ 0.8
MYO9A-216ENST00000567560 CHIC2Q9UKJ5 165 aa20.03■□□□□ 0.8
MYO9A-216ENST00000567560 KCNH8Q96L42 1107 aa20.02■□□□□ 0.8
MYO9A-216ENST00000567560 CCDC88BA6NC98 1476 aa20■□□□□ 0.79
MYO9A-216ENST00000567560 ABCC8Q09428 1581 aa19.99■□□□□ 0.79
MYO9A-216ENST00000567560 TSHZ2Q9NRE2 1034 aa19.99■□□□□ 0.79
MYO9A-216ENST00000567560 TNIKQ9UKE5 1360 aa19.98■□□□□ 0.79
MYO9A-216ENST00000567560 TONSLQ96HA7 1378 aa19.96■□□□□ 0.79
MYO9A-216ENST00000567560 EIF5BO60841 1220 aaKnown RBP19.96■□□□□ 0.79
MYO9A-216ENST00000567560 ANP32AP39687 249 aaKnown RBP19.96■□□□□ 0.79
MYO9A-216ENST00000567560 KANK4Q5T7N3 995 aaPredicted RBP19.94■□□□□ 0.78
MYO9A-216ENST00000567560 BAZ1AQ9NRL2 1556 aaPredicted RBP19.92■□□□□ 0.78
MYO9A-216ENST00000567560 RBM19Q9Y4C8 960 aaKnown RBP19.9■□□□□ 0.78
MYO9A-216ENST00000567560 SLC4A1APQ9BWU0 796 aaKnown RBP19.89■□□□□ 0.78
MYO9A-216ENST00000567560 MRS2Q9HD23 443 aa19.89■□□□□ 0.77
MYO9A-216ENST00000567560 GOLGA3Q08378 1498 aa19.87■□□□□ 0.77
MYO9A-216ENST00000567560 WRNQ14191 1432 aaPredicted RBP eCLIP19.87■□□□□ 0.77
MYO9A-216ENST00000567560 CCDC136Q96JN2 1154 aa19.87■□□□□ 0.77
MYO9A-216ENST00000567560 RUSC2Q8N2Y8 1516 aa19.85■□□□□ 0.77
MYO9A-216ENST00000567560 MYT1LQ9UL68 1186 aa19.85■□□□□ 0.77
MYO9A-216ENST00000567560 RTN4Q9NQC3 1192 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms