RNA–Protein interactions for RNA: ENST00000567329.1

USP7-217, Transcript of ubiquitin specific peptidase 7, humanhuman

TSL 4

Gene USP7, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP7-217ENST00000567329 AEBP2Q6ZN18 517 aaPredicted RBP20.46■□□□□ 0.87
USP7-217ENST00000567329 CHIC1Q5VXU3 224 aa20.37■□□□□ 0.85
USP7-217ENST00000567329 PHF23Q9BUL5 403 aaPredicted RBP18.03■□□□□ 0.48
USP7-217ENST00000567329 SENP3Q9H4L4 574 aaPredicted RBP17.16■□□□□ 0.34
USP7-217ENST00000567329 PLPPR3Q6T4P5 718 aa16.68■□□□□ 0.26
USP7-217ENST00000567329 FOXD1Q16676 465 aa15.94■□□□□ 0.14
USP7-217ENST00000567329 PPP6R1Q9UPN7 881 aa15.73■□□□□ 0.11
USP7-217ENST00000567329 ADRA2BP18089 450 aa15.7■□□□□ 0.1
USP7-217ENST00000567329 PIAS4Q8N2W9 510 aaPredicted RBP15.08■□□□□ 0
USP7-217ENST00000567329 KCNA4P22459 653 aa15.01□□□□□ -0.01
USP7-217ENST00000567329 PPP4R3CPQ6ZMV5 832 aa14.78□□□□□ -0.04
USP7-217ENST00000567329 MSH5O43196 834 aa14.43□□□□□ -0.1
USP7-217ENST00000567329 NCBP3Q53F19 620 aaKnown RBP14.43□□□□□ -0.1
USP7-217ENST00000567329 EHMT2Q96KQ7 1210 aa14.42□□□□□ -0.1
USP7-217ENST00000567329 NPM3O75607 178 aaKnown RBP14.36□□□□□ -0.11
USP7-217ENST00000567329 SLC4A1APQ9BWU0 796 aaKnown RBP14.31□□□□□ -0.12
USP7-217ENST00000567329 CNKSR2Q8WXI2 1034 aa14.25□□□□□ -0.13
USP7-217ENST00000567329 SCAF1Q9H7N4 1312 aaKnown RBP14.21□□□□□ -0.13
USP7-217ENST00000567329 CSRNP3Q8WYN3 585 aa14.13□□□□□ -0.15
USP7-217ENST00000567329 MAPK8IP2Q13387 824 aaPredicted RBP14.1□□□□□ -0.15
USP7-217ENST00000567329 DNAJC5BQ9UF47 199 aa13.95□□□□□ -0.18
USP7-217ENST00000567329 NISCHQ9Y2I1 1504 aa13.92□□□□□ -0.18
USP7-217ENST00000567329 ZBTB22O15209 634 aa13.91□□□□□ -0.18
USP7-217ENST00000567329 RNF216Q9NWF9 866 aaPredicted RBP13.87□□□□□ -0.19
USP7-217ENST00000567329 DMRT2Q9Y5R5 561 aa13.82□□□□□ -0.2
USP7-217ENST00000567329 HOXD11P31277 338 aaPredicted RBP13.74□□□□□ -0.21
USP7-217ENST00000567329 FOXD4L1Q9NU39 408 aa13.65□□□□□ -0.22
USP7-217ENST00000567329 SLC4A2P04920 1241 aa13.49□□□□□ -0.25
USP7-217ENST00000567329 MYCNP04198 464 aaPredicted RBP13.21□□□□□ -0.29
USP7-217ENST00000567329 ATXN8OSP0DMR3 200 aa13.12□□□□□ -0.31
USP7-217ENST00000567329 ABCC9O60706 1549 aa13.07□□□□□ -0.32
USP7-217ENST00000567329 DCAF8L1A6NGE4 600 aa13.04□□□□□ -0.32
USP7-217ENST00000567329 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.95□□□□□ -0.341e-7■■□□□ 12.4
USP7-217ENST00000567329 U3KPZ7 1027 aaPredicted RBP12.94□□□□□ -0.34
USP7-217ENST00000567329 ATF5Q9Y2D1 282 aaPredicted RBP12.91□□□□□ -0.34
USP7-217ENST00000567329 SAMD1Q6SPF0 538 aaPredicted RBP12.79□□□□□ -0.36
USP7-217ENST00000567329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.78□□□□□ -0.36
USP7-217ENST00000567329 HNRNPUL2Q1KMD3 747 aaKnown RBP12.78□□□□□ -0.36
USP7-217ENST00000567329 FKBP8Q14318 412 aa12.67□□□□□ -0.38
USP7-217ENST00000567329 CCDC180Q9P1Z9 1646 aa12.61□□□□□ -0.39
USP7-217ENST00000567329 ZNF219Q9P2Y4 722 aaPredicted RBP12.56□□□□□ -0.4
USP7-217ENST00000567329 APLP2Q06481 763 aa12.51□□□□□ -0.41
USP7-217ENST00000567329 RNF39Q9H2S5 420 aa12.49□□□□□ -0.41
USP7-217ENST00000567329 SPINK5Q9NQ38 1064 aaPredicted RBP12.42□□□□□ -0.42
USP7-217ENST00000567329 RTN4Q9NQC3 1192 aaKnown RBP12.41□□□□□ -0.42
USP7-217ENST00000567329 POTEDQ86YR6 584 aa12.39□□□□□ -0.43
USP7-217ENST00000567329 MKRN4PQ13434 485 aaPredicted RBP12.38□□□□□ -0.43
USP7-217ENST00000567329 AMER1Q5JTC6 1135 aaPredicted RBP12.36□□□□□ -0.43
USP7-217ENST00000567329 TRHP20396 242 aaPredicted RBP12.29□□□□□ -0.44
USP7-217ENST00000567329 C1QBPQ07021 282 aaKnown RBP12.29□□□□□ -0.44
USP7-217ENST00000567329 CAPN15O75808 1086 aa12.24□□□□□ -0.45
USP7-217ENST00000567329 POLA2Q14181 598 aa12.23□□□□□ -0.45
USP7-217ENST00000567329 PROM2Q8N271 834 aa12.23□□□□□ -0.45
USP7-217ENST00000567329 SPDYE4A6NLX3 237 aa12.2□□□□□ -0.46
USP7-217ENST00000567329 RB1CC1Q8TDY2 1594 aa12.19□□□□□ -0.46
USP7-217ENST00000567329 FBLN2P98095 1184 aa12.16□□□□□ -0.46
USP7-217ENST00000567329 PABPN1Q86U42 306 aaKnown RBP eCLIP12.14□□□□□ -0.47
USP7-217ENST00000567329 ABCB7O75027 752 aa12.1□□□□□ -0.47
USP7-217ENST00000567329 DSG3P32926 999 aa12.03□□□□□ -0.48
USP7-217ENST00000567329 ZBTB12Q9Y330 459 aaPredicted RBP12.03□□□□□ -0.48
USP7-217ENST00000567329 FBXO3Q9UK99 471 aa12.02□□□□□ -0.49
USP7-217ENST00000567329 UNC13AQ9UPW8 1703 aa12□□□□□ -0.49
USP7-217ENST00000567329 NACADO15069 1562 aa12□□□□□ -0.49
USP7-217ENST00000567329 DCAF8L2P0C7V8 631 aa11.99□□□□□ -0.49
USP7-217ENST00000567329 VASPP50552 380 aaPredicted RBP11.94□□□□□ -0.5
USP7-217ENST00000567329 BICRAQ9NZM4 1560 aa11.92□□□□□ -0.5
USP7-217ENST00000567329 SLC24A1O60721 1099 aa11.91□□□□□ -0.5
USP7-217ENST00000567329 OSCARQ8IYS5 282 aa11.86□□□□□ -0.51
USP7-217ENST00000567329 IFNLR1Q8IU57 520 aaPredicted RBP11.85□□□□□ -0.51
USP7-217ENST00000567329 SSUH2Q9Y2M2 353 aa11.84□□□□□ -0.51
USP7-217ENST00000567329 SPDYE2BA6NHP3 402 aa11.79□□□□□ -0.52
USP7-217ENST00000567329 SPDYE6P0CI01 402 aa11.79□□□□□ -0.52
USP7-217ENST00000567329 SPDYE2Q495Y8 402 aa11.79□□□□□ -0.52
USP7-217ENST00000567329 DNAJC5Q9H3Z4 198 aa11.78□□□□□ -0.52
USP7-217ENST00000567329 ZNF692Q9BU19 519 aaPredicted RBP11.77□□□□□ -0.53
USP7-217ENST00000567329 CECR2Q9BXF3 1484 aa11.76□□□□□ -0.53
USP7-217ENST00000567329 CC2D2AQ9P2K1 1620 aa11.76□□□□□ -0.53
USP7-217ENST00000567329 CACNB1Q02641 598 aaPredicted RBP11.69□□□□□ -0.54
USP7-217ENST00000567329 MYO15BQ96JP2 1530 aa11.66□□□□□ -0.54
USP7-217ENST00000567329 PKD2Q13563 968 aa11.66□□□□□ -0.54
USP7-217ENST00000567329 HRCP23327 699 aa11.63□□□□□ -0.55
USP7-217ENST00000567329 EIF4G1Q04637 1599 aaKnown RBP11.62□□□□□ -0.55
USP7-217ENST00000567329 STAG3Q9UJ98 1225 aa11.62□□□□□ -0.55
USP7-217ENST00000567329 SCRIBQ14160 1630 aa11.56□□□□□ -0.56
USP7-217ENST00000567329 SHROOM4Q9ULL8 1493 aa11.56□□□□□ -0.56
USP7-217ENST00000567329 SPOCK2Q92563 424 aa11.55□□□□□ -0.56
USP7-217ENST00000567329 PELP1Q8IZL8 1130 aaKnown RBP11.49□□□□□ -0.57
USP7-217ENST00000567329 KLHL34Q8N239 644 aa11.48□□□□□ -0.57
USP7-217ENST00000567329 PLCD3Q8N3E9 789 aa11.48□□□□□ -0.57
USP7-217ENST00000567329 ZCCHC6Q5VYS8 1495 aaKnown RBP11.45□□□□□ -0.58
USP7-217ENST00000567329 PLCB2Q00722 1185 aa11.44□□□□□ -0.58
USP7-217ENST00000567329 MIER1Q8N108 512 aa11.44□□□□□ -0.58
USP7-217ENST00000567329 DCAF1Q9Y4B6 1507 aa11.4□□□□□ -0.58
USP7-217ENST00000567329 ECM2O94769 699 aaPredicted RBP11.39□□□□□ -0.59
USP7-217ENST00000567329 AKT1S1Q96B36 256 aa11.36□□□□□ -0.59
USP7-217ENST00000567329 RBM42Q9BTD8 480 aaKnown RBP11.35□□□□□ -0.59
USP7-217ENST00000567329 RGL2O15211 777 aa11.34□□□□□ -0.59
USP7-217ENST00000567329 ZBTB47Q9UFB7 747 aaPredicted RBP11.33□□□□□ -0.6
USP7-217ENST00000567329 NPM1P06748 294 aaKnown RBP eCLIP11.32□□□□□ -0.6
USP7-217ENST00000567329 CUX2O14529 1486 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms