RNA–Protein interactions for RNA: ENST00000565883.1

USP7-211, Transcript of ubiquitin specific peptidase 7, humanhuman

TSL 2

Gene USP7, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP7-211ENST00000565883 AEBP2Q6ZN18 517 aaPredicted RBP20.85■□□□□ 0.93
USP7-211ENST00000565883 CHIC1Q5VXU3 224 aa19.73■□□□□ 0.75
USP7-211ENST00000565883 SENP3Q9H4L4 574 aaPredicted RBP17.88■□□□□ 0.45
USP7-211ENST00000565883 PHF23Q9BUL5 403 aaPredicted RBP17.62■□□□□ 0.41
USP7-211ENST00000565883 FOXD1Q16676 465 aa16.64■□□□□ 0.25
USP7-211ENST00000565883 PLPPR3Q6T4P5 718 aa15.74■□□□□ 0.11
USP7-211ENST00000565883 MSH5O43196 834 aa15.68■□□□□ 0.1
USP7-211ENST00000565883 PIAS4Q8N2W9 510 aaPredicted RBP15.55■□□□□ 0.08
USP7-211ENST00000565883 POTEDQ86YR6 584 aa15.46■□□□□ 0.07
USP7-211ENST00000565883 PPP6R1Q9UPN7 881 aa15.44■□□□□ 0.06
USP7-211ENST00000565883 ADRA2BP18089 450 aa15.41■□□□□ 0.06
USP7-211ENST00000565883 SCAF1Q9H7N4 1312 aaKnown RBP14.2□□□□□ -0.14
USP7-211ENST00000565883 MAPK8IP2Q13387 824 aaPredicted RBP14.19□□□□□ -0.14
USP7-211ENST00000565883 DMRT2Q9Y5R5 561 aa14.13□□□□□ -0.15
USP7-211ENST00000565883 PPP4R3CPQ6ZMV5 832 aa13.77□□□□□ -0.21
USP7-211ENST00000565883 DCAF8L1A6NGE4 600 aa13.63□□□□□ -0.23
USP7-211ENST00000565883 HOXD11P31277 338 aaPredicted RBP13.57□□□□□ -0.24
USP7-211ENST00000565883 CNKSR2Q8WXI2 1034 aa13.55□□□□□ -0.24
USP7-211ENST00000565883 CACNB1Q02641 598 aaPredicted RBP13.54□□□□□ -0.24
USP7-211ENST00000565883 RNF216Q9NWF9 866 aaPredicted RBP13.45□□□□□ -0.26
USP7-211ENST00000565883 RNF39Q9H2S5 420 aa13.32□□□□□ -0.28
USP7-211ENST00000565883 NCBP3Q53F19 620 aaKnown RBP13.26□□□□□ -0.29
USP7-211ENST00000565883 C1QBPQ07021 282 aaKnown RBP13.16□□□□□ -0.3
USP7-211ENST00000565883 DNAJC5BQ9UF47 199 aa13.14□□□□□ -0.31
USP7-211ENST00000565883 DNAJC5Q9H3Z4 198 aa13.06□□□□□ -0.32
USP7-211ENST00000565883 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.99□□□□□ -0.33
USP7-211ENST00000565883 NPM3O75607 178 aaKnown RBP12.98□□□□□ -0.33
USP7-211ENST00000565883 U3KPZ7 1027 aaPredicted RBP12.63□□□□□ -0.39
USP7-211ENST00000565883 KCNA4P22459 653 aa12.62□□□□□ -0.39
USP7-211ENST00000565883 CAPN15O75808 1086 aa12.53□□□□□ -0.4
USP7-211ENST00000565883 SPINK5Q9NQ38 1064 aaPredicted RBP12.49□□□□□ -0.41
USP7-211ENST00000565883 ABCC9O60706 1549 aa12.46□□□□□ -0.42
USP7-211ENST00000565883 DSG3P32926 999 aa12.43□□□□□ -0.42
USP7-211ENST00000565883 SLC4A2P04920 1241 aa12.42□□□□□ -0.42
USP7-211ENST00000565883 APLP2Q06481 763 aa12.38□□□□□ -0.43
USP7-211ENST00000565883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.31□□□□□ -0.44
USP7-211ENST00000565883 HNRNPUL2Q1KMD3 747 aaKnown RBP12.31□□□□□ -0.44
USP7-211ENST00000565883 TRHP20396 242 aaPredicted RBP12.3□□□□□ -0.44
USP7-211ENST00000565883 ZNF219Q9P2Y4 722 aaPredicted RBP12.27□□□□□ -0.45
USP7-211ENST00000565883 SAMD1Q6SPF0 538 aaPredicted RBP12.22□□□□□ -0.45
USP7-211ENST00000565883 ABCB7O75027 752 aa12.2□□□□□ -0.46
USP7-211ENST00000565883 POTEHQ6S545 545 aa12.11□□□□□ -0.47
USP7-211ENST00000565883 MYCNP04198 464 aaPredicted RBP12.05□□□□□ -0.48
USP7-211ENST00000565883 SLC4A1APQ9BWU0 796 aaKnown RBP11.94□□□□□ -0.5
USP7-211ENST00000565883 POLA2Q14181 598 aa11.93□□□□□ -0.5
USP7-211ENST00000565883 TRIM41Q8WV44 630 aa11.93□□□□□ -0.5
USP7-211ENST00000565883 RBM42Q9BTD8 480 aaKnown RBP11.93□□□□□ -0.5
USP7-211ENST00000565883 FOXD4L1Q9NU39 408 aa11.85□□□□□ -0.51
USP7-211ENST00000565883 NISCHQ9Y2I1 1504 aa11.76□□□□□ -0.53
USP7-211ENST00000565883 ATF5Q9Y2D1 282 aaPredicted RBP11.72□□□□□ -0.53
USP7-211ENST00000565883 ZBTB12Q9Y330 459 aaPredicted RBP11.7□□□□□ -0.54
USP7-211ENST00000565883 CHRDL2Q6WN34 429 aa11.68□□□□□ -0.54
USP7-211ENST00000565883 AKT1S1Q96B36 256 aa11.61□□□□□ -0.55
USP7-211ENST00000565883 ZBTB22O15209 634 aa11.56□□□□□ -0.56
USP7-211ENST00000565883 OSCARQ8IYS5 282 aa11.52□□□□□ -0.57
USP7-211ENST00000565883 ATXN8OSP0DMR3 200 aa11.51□□□□□ -0.57
USP7-211ENST00000565883 ILDR1Q86SU0 546 aaPredicted RBP11.51□□□□□ -0.57
USP7-211ENST00000565883 REM2Q8IYK8 340 aaPredicted RBP11.48□□□□□ -0.57
USP7-211ENST00000565883 CECR2Q9BXF3 1484 aa11.38□□□□□ -0.59
USP7-211ENST00000565883 FBLN2P98095 1184 aa11.38□□□□□ -0.59
USP7-211ENST00000565883 PABPN1Q86U42 306 aaKnown RBP eCLIP11.37□□□□□ -0.59
USP7-211ENST00000565883 CUX2O14529 1486 aa11.36□□□□□ -0.59
USP7-211ENST00000565883 PIP4P2Q8N4L2 257 aa11.35□□□□□ -0.59
USP7-211ENST00000565883 PITPNM1O00562 1244 aa11.34□□□□□ -0.59
USP7-211ENST00000565883 SPDYE2BA6NHP3 402 aa11.31□□□□□ -0.6
USP7-211ENST00000565883 SPDYE6P0CI01 402 aa11.31□□□□□ -0.6
USP7-211ENST00000565883 SPDYE2Q495Y8 402 aa11.31□□□□□ -0.6
USP7-211ENST00000565883 SP7Q8TDD2 431 aaPredicted RBP11.3□□□□□ -0.6
USP7-211ENST00000565883 FXR2P51116 673 aaKnown RBP eCLIP11.27□□□□□ -0.612e-7■■□□□ 13.7
USP7-211ENST00000565883 HAX1O00165 279 aa11.24□□□□□ -0.61
USP7-211ENST00000565883 RB1CC1Q8TDY2 1594 aa11.2□□□□□ -0.62
USP7-211ENST00000565883 MKRN4PQ13434 485 aaPredicted RBP11.17□□□□□ -0.62
USP7-211ENST00000565883 ZNF692Q9BU19 519 aaPredicted RBP11.17□□□□□ -0.62
USP7-211ENST00000565883 SPDYE1Q8NFV5 336 aaPredicted RBP11.16□□□□□ -0.62
USP7-211ENST00000565883 CC2D2AQ9P2K1 1620 aa11.16□□□□□ -0.62
USP7-211ENST00000565883 CLEC11AQ9Y240 323 aa11.15□□□□□ -0.62
USP7-211ENST00000565883 SSUH2Q9Y2M2 353 aa11.1□□□□□ -0.63
USP7-211ENST00000565883 PRKAR2AP13861 404 aaKnown RBP11.07□□□□□ -0.64
USP7-211ENST00000565883 EVX2Q03828 476 aa11.01□□□□□ -0.65
USP7-211ENST00000565883 CCDC180Q9P1Z9 1646 aa10.96□□□□□ -0.65
USP7-211ENST00000565883 PRR29P0C7W0 189 aa10.96□□□□□ -0.65
USP7-211ENST00000565883 CSRNP3Q8WYN3 585 aa10.96□□□□□ -0.65
USP7-211ENST00000565883 C19orf67A6NJJ6 358 aa10.92□□□□□ -0.66
USP7-211ENST00000565883 ERCC6Q03468 1493 aa10.92□□□□□ -0.66
USP7-211ENST00000565883 CHADLQ6NUI6 762 aa10.91□□□□□ -0.66
USP7-211ENST00000565883 UNC13AQ9UPW8 1703 aa10.89□□□□□ -0.67
USP7-211ENST00000565883 BICRAQ9NZM4 1560 aa10.86□□□□□ -0.67
USP7-211ENST00000565883 SOCS7O14512 581 aa10.83□□□□□ -0.68
USP7-211ENST00000565883 LMTK3Q96Q04 1460 aa10.81□□□□□ -0.68
USP7-211ENST00000565883 GABBR2O75899 941 aa10.8□□□□□ -0.68
USP7-211ENST00000565883 EHMT2Q96KQ7 1210 aa10.78□□□□□ -0.68
USP7-211ENST00000565883 EIF4G1Q04637 1599 aaKnown RBP10.75□□□□□ -0.69
USP7-211ENST00000565883 FARP1Q9Y4F1 1045 aaPredicted RBP10.75□□□□□ -0.69
USP7-211ENST00000565883 NACADO15069 1562 aa10.73□□□□□ -0.69
USP7-211ENST00000565883 CD44P16070 742 aaKnown RBP10.72□□□□□ -0.69
USP7-211ENST00000565883 STAG3Q9UJ98 1225 aa10.7□□□□□ -0.7
USP7-211ENST00000565883 SPDYE4A6NLX3 237 aa10.65□□□□□ -0.7
USP7-211ENST00000565883 CLCN6P51797 869 aa10.65□□□□□ -0.7
USP7-211ENST00000565883 LHX8Q68G74 356 aa10.61□□□□□ -0.71
USP7-211ENST00000565883 RIMBP3CA6NJZ7 1639 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms