RNA–Protein interactions for RNA: ENST00000565280.5

FAN1-206, Transcript of FANCD2 and FANCI associated nuclease 1, humanhuman

TSL 1 (best)

Gene FAN1, Length 4,999 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAN1-206ENST00000565280 NISCHQ9Y2I1 1504 aa25.18■■□□□ 1.62
FAN1-206ENST00000565280 DCAF8L2P0C7V8 631 aa24.65■■□□□ 1.54
FAN1-206ENST00000565280 SUPT5HO00267 1087 aaKnown RBP23.33■■□□□ 1.32
FAN1-206ENST00000565280 SHROOM4Q9ULL8 1493 aa23.18■■□□□ 1.3
FAN1-206ENST00000565280 EHMT2Q96KQ7 1210 aa22.07■■□□□ 1.12
FAN1-206ENST00000565280 APLP2Q06481 763 aa21.98■■□□□ 1.11
FAN1-206ENST00000565280 FAM9AQ8IZU1 332 aaPredicted RBP21.85■■□□□ 1.09
FAN1-206ENST00000565280 TRIM41Q8WV44 630 aa21.81■■□□□ 1.08
FAN1-206ENST00000565280 ABCC9O60706 1549 aa21.44■■□□□ 1.02
FAN1-206ENST00000565280 UBTFP17480 764 aaKnown RBP21.4■■□□□ 1.02
FAN1-206ENST00000565280 PCGF6Q9BYE7 350 aa21.34■■□□□ 1.01
FAN1-206ENST00000565280 RANGAP1P46060 587 aaPredicted RBP21.32■■□□□ 1
FAN1-206ENST00000565280 TTBK1Q5TCY1 1321 aaPredicted RBP21.3■■□□□ 1
FAN1-206ENST00000565280 ATP1B4Q9UN42 357 aaPredicted RBP21.19■□□□□ 0.98
FAN1-206ENST00000565280 ZEB1P37275 1124 aaPredicted RBP21.18■□□□□ 0.98
FAN1-206ENST00000565280 CHIC1Q5VXU3 224 aa21.07■□□□□ 0.96
FAN1-206ENST00000565280 PELP1Q8IZL8 1130 aaKnown RBP21.03■□□□□ 0.96
FAN1-206ENST00000565280 CCER1Q8TC90 406 aaPredicted RBP21.03■□□□□ 0.96
FAN1-206ENST00000565280 PABPN1Q86U42 306 aaKnown RBP eCLIP21.02■□□□□ 0.95
FAN1-206ENST00000565280 CCDC180Q9P1Z9 1646 aa21.01■□□□□ 0.95
FAN1-206ENST00000565280 ZCCHC6Q5VYS8 1495 aaKnown RBP20.9■□□□□ 0.94
FAN1-206ENST00000565280 TRIM26Q12899 539 aaPredicted RBP20.83■□□□□ 0.92
FAN1-206ENST00000565280 LOC105371045A0A1W2PR82 267 aa20.74■□□□□ 0.91
FAN1-206ENST00000565280 PPARGC1BQ86YN6 1023 aaKnown RBP20.68■□□□□ 0.9
FAN1-206ENST00000565280 CENPBP07199 599 aaPredicted RBP20.63■□□□□ 0.89
FAN1-206ENST00000565280 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.61■□□□□ 0.89
FAN1-206ENST00000565280 HNRNPUL2Q1KMD3 747 aaKnown RBP20.61■□□□□ 0.89
FAN1-206ENST00000565280 SCRIBQ14160 1630 aa20.6■□□□□ 0.89
FAN1-206ENST00000565280 ITGAEP38570 1179 aa20.45■□□□□ 0.86
FAN1-206ENST00000565280 RB1CC1Q8TDY2 1594 aa20.41■□□□□ 0.86
FAN1-206ENST00000565280 MYT1LQ9UL68 1186 aa20.37■□□□□ 0.85
FAN1-206ENST00000565280 HRCP23327 699 aa20.34■□□□□ 0.85
FAN1-206ENST00000565280 NACADO15069 1562 aa20.32■□□□□ 0.84
FAN1-206ENST00000565280 CSRNP3Q8WYN3 585 aa20.26■□□□□ 0.83
FAN1-206ENST00000565280 NEFLP07196 543 aa20.18■□□□□ 0.82
FAN1-206ENST00000565280 DCAF1Q9Y4B6 1507 aa20.16■□□□□ 0.82
FAN1-206ENST00000565280 FAM50AQ14320 339 aaKnown RBP20.15■□□□□ 0.82
FAN1-206ENST00000565280 FBLN2P98095 1184 aa20.1■□□□□ 0.81
FAN1-206ENST00000565280 YTHDC1Q96MU7 727 aaKnown RBP20.07■□□□□ 0.8
FAN1-206ENST00000565280 RSF1Q96T23 1441 aaPredicted RBP19.99■□□□□ 0.79
FAN1-206ENST00000565280 POLR3GLQ9BT43 218 aa19.97■□□□□ 0.79
FAN1-206ENST00000565280 TRIM52Q96A61 297 aa19.96■□□□□ 0.79
FAN1-206ENST00000565280 ERICH6Q7L0X2 663 aa19.91■□□□□ 0.78
FAN1-206ENST00000565280 CDK11AQ9UQ88 783 aaPredicted RBP19.88■□□□□ 0.77
FAN1-206ENST00000565280 P3H3Q8IVL6 736 aa19.88■□□□□ 0.77
FAN1-206ENST00000565280 BAZ1AQ9NRL2 1556 aaPredicted RBP19.82■□□□□ 0.76
FAN1-206ENST00000565280 BAZ1BQ9UIG0 1483 aaKnown RBP19.82■□□□□ 0.76
FAN1-206ENST00000565280 EEA1Q15075 1411 aa19.78■□□□□ 0.76
FAN1-206ENST00000565280 NEUROD1Q13562 356 aa19.76■□□□□ 0.75
FAN1-206ENST00000565280 DIEXFQ68CQ4 756 aaKnown RBP19.76■□□□□ 0.75
FAN1-206ENST00000565280 MYO15BQ96JP2 1530 aa19.67■□□□□ 0.74
FAN1-206ENST00000565280 ARID3CA6NKF2 412 aa19.67■□□□□ 0.74
FAN1-206ENST00000565280 WRNQ14191 1432 aaPredicted RBP eCLIP19.66■□□□□ 0.74
FAN1-206ENST00000565280 SLC4A1APQ9BWU0 796 aaKnown RBP19.63■□□□□ 0.73
FAN1-206ENST00000565280 CNGB1Q14028 1251 aaPredicted RBP19.61■□□□□ 0.73
FAN1-206ENST00000565280 ZNF777Q9ULD5 760 aaPredicted RBP19.61■□□□□ 0.73
FAN1-206ENST00000565280 CECR2Q9BXF3 1484 aa19.6■□□□□ 0.73
FAN1-206ENST00000565280 CLIP1P30622 1438 aa19.57■□□□□ 0.72
FAN1-206ENST00000565280 GOLGA3Q08378 1498 aa19.57■□□□□ 0.72
FAN1-206ENST00000565280 CHMP7Q8WUX9 453 aaPredicted RBP19.56■□□□□ 0.72
FAN1-206ENST00000565280 ZNF326Q5BKZ1 582 aaKnown RBP19.55■□□□□ 0.72
FAN1-206ENST00000565280 NPM1P06748 294 aaKnown RBP eCLIP19.55■□□□□ 0.72
FAN1-206ENST00000565280 KIF27Q86VH2 1401 aa19.53■□□□□ 0.72
FAN1-206ENST00000565280 ZNF316A6NFI3 1004 aaPredicted RBP19.53■□□□□ 0.72
FAN1-206ENST00000565280 ANP32CO43423 234 aa19.51■□□□□ 0.71
FAN1-206ENST00000565280 MTUS2Q5JR59 1369 aa19.47■□□□□ 0.71
FAN1-206ENST00000565280 CEP164Q9UPV0 1460 aa19.44■□□□□ 0.7
FAN1-206ENST00000565280 SMARCA2P51531 1590 aa19.43■□□□□ 0.7
FAN1-206ENST00000565280 CEP162Q5TB80 1403 aa19.41■□□□□ 0.7
FAN1-206ENST00000565280 TNIKQ9UKE5 1360 aa19.4■□□□□ 0.7
FAN1-206ENST00000565280 MROH2BQ7Z745 1585 aa19.4■□□□□ 0.7
FAN1-206ENST00000565280 TONSLQ96HA7 1378 aa19.38■□□□□ 0.69
FAN1-206ENST00000565280 DAXXQ9UER7 740 aaPredicted RBP19.37■□□□□ 0.69
FAN1-206ENST00000565280 TSPY4P0CV99 314 aa19.34■□□□□ 0.69
FAN1-206ENST00000565280 TSPY10P0CW01 314 aa19.34■□□□□ 0.69
FAN1-206ENST00000565280 ESF1Q9H501 851 aaKnown RBP19.33■□□□□ 0.68
FAN1-206ENST00000565280 ERCC6Q03468 1493 aa19.32■□□□□ 0.68
FAN1-206ENST00000565280 ACIN1Q9UKV3 1341 aaKnown RBP19.3■□□□□ 0.68
FAN1-206ENST00000565280 CCDC88BA6NC98 1476 aa19.29■□□□□ 0.68
FAN1-206ENST00000565280 CHIC2Q9UKJ5 165 aa19.26■□□□□ 0.67
FAN1-206ENST00000565280 BCANQ96GW7 911 aa19.25■□□□□ 0.67
FAN1-206ENST00000565280 PLEKHD1A6NEE1 506 aa19.25■□□□□ 0.67
FAN1-206ENST00000565280 TOP2AP11388 1531 aaKnown RBP19.23■□□□□ 0.67
FAN1-206ENST00000565280 CUX2O14529 1486 aa19.19■□□□□ 0.66
FAN1-206ENST00000565280 PDS5BQ9NTI5 1447 aa19.18■□□□□ 0.66
FAN1-206ENST00000565280 CARMIL1Q5VZK9 1371 aa19.17■□□□□ 0.66
FAN1-206ENST00000565280 NEFMP07197 916 aa19.16■□□□□ 0.66
FAN1-206ENST00000565280 STAG3Q9UJ98 1225 aa19.16■□□□□ 0.66
FAN1-206ENST00000565280 CHGAP10645 457 aaKnown RBP19.15■□□□□ 0.66
FAN1-206ENST00000565280 FHAD1B1AJZ9 1412 aa19.15■□□□□ 0.66
FAN1-206ENST00000565280 CLSPNQ9HAW4 1339 aa19.14■□□□□ 0.65
FAN1-206ENST00000565280 MYT1Q01538 1121 aa19.13■□□□□ 0.65
FAN1-206ENST00000565280 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.13■□□□□ 0.659e-7■□□□□ 8.9
FAN1-206ENST00000565280 SOGA1O94964 1423 aa19.11■□□□□ 0.65
FAN1-206ENST00000565280 WIZO95785 1651 aa19.1■□□□□ 0.65
FAN1-206ENST00000565280 ATAD2BQ9ULI0 1458 aa19.07■□□□□ 0.64
FAN1-206ENST00000565280 SMARCA4P51532 1647 aa19.06■□□□□ 0.64
FAN1-206ENST00000565280 CFDP1Q9UEE9 299 aaPredicted RBP19.06■□□□□ 0.64
FAN1-206ENST00000565280 KCNH8Q96L42 1107 aa19.05■□□□□ 0.64
FAN1-206ENST00000565280 CADPSQ9ULU8 1353 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms