RNA–Protein interactions for RNA: ENST00000561408.1

TMOD3-210, Transcript of tropomodulin 3, humanhuman

TSL 3

Gene TMOD3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-210ENST00000561408 AEBP2Q6ZN18 517 aaPredicted RBP20.51■□□□□ 0.87
TMOD3-210ENST00000561408 CHIC1Q5VXU3 224 aa19.71■□□□□ 0.75
TMOD3-210ENST00000561408 SENP3Q9H4L4 574 aaPredicted RBP17.47■□□□□ 0.39
TMOD3-210ENST00000561408 PHF23Q9BUL5 403 aaPredicted RBP17.3■□□□□ 0.36
TMOD3-210ENST00000561408 FOXD1Q16676 465 aa16.26■□□□□ 0.19
TMOD3-210ENST00000561408 PLPPR3Q6T4P5 718 aa15.87■□□□□ 0.13
TMOD3-210ENST00000561408 PPP6R1Q9UPN7 881 aa15.38■□□□□ 0.05
TMOD3-210ENST00000561408 ADRA2BP18089 450 aa15.36■□□□□ 0.05
TMOD3-210ENST00000561408 PIAS4Q8N2W9 510 aaPredicted RBP15.26■□□□□ 0.03
TMOD3-210ENST00000561408 MSH5O43196 834 aa15.12■□□□□ 0.01
TMOD3-210ENST00000561408 POTEDQ86YR6 584 aa14.36□□□□□ -0.11
TMOD3-210ENST00000561408 SCAF1Q9H7N4 1312 aaKnown RBP14.05□□□□□ -0.16
TMOD3-210ENST00000561408 MAPK8IP2Q13387 824 aaPredicted RBP14.04□□□□□ -0.16
TMOD3-210ENST00000561408 PPP4R3CPQ6ZMV5 832 aa13.95□□□□□ -0.18
TMOD3-210ENST00000561408 DMRT2Q9Y5R5 561 aa13.88□□□□□ -0.19
TMOD3-210ENST00000561408 CNKSR2Q8WXI2 1034 aa13.63□□□□□ -0.23
TMOD3-210ENST00000561408 NCBP3Q53F19 620 aaKnown RBP13.49□□□□□ -0.25
TMOD3-210ENST00000561408 HOXD11P31277 338 aaPredicted RBP13.46□□□□□ -0.25
TMOD3-210ENST00000561408 RNF216Q9NWF9 866 aaPredicted RBP13.43□□□□□ -0.26
TMOD3-210ENST00000561408 DCAF8L1A6NGE4 600 aa13.35□□□□□ -0.27
TMOD3-210ENST00000561408 NPM3O75607 178 aaKnown RBP13.28□□□□□ -0.28
TMOD3-210ENST00000561408 KCNA4P22459 653 aa13.24□□□□□ -0.29
TMOD3-210ENST00000561408 DNAJC5BQ9UF47 199 aa12.93□□□□□ -0.34
TMOD3-210ENST00000561408 RNF39Q9H2S5 420 aa12.91□□□□□ -0.34
TMOD3-210ENST00000561408 CACNB1Q02641 598 aaPredicted RBP12.86□□□□□ -0.35
TMOD3-210ENST00000561408 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.86□□□□□ -0.35
TMOD3-210ENST00000561408 C1QBPQ07021 282 aaKnown RBP12.74□□□□□ -0.37
TMOD3-210ENST00000561408 SLC4A2P04920 1241 aa12.61□□□□□ -0.39
TMOD3-210ENST00000561408 U3KPZ7 1027 aaPredicted RBP12.59□□□□□ -0.39
TMOD3-210ENST00000561408 SLC4A1APQ9BWU0 796 aaKnown RBP12.55□□□□□ -0.4
TMOD3-210ENST00000561408 SPINK5Q9NQ38 1064 aaPredicted RBP12.35□□□□□ -0.43
TMOD3-210ENST00000561408 CAPN15O75808 1086 aa12.34□□□□□ -0.43
TMOD3-210ENST00000561408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.32□□□□□ -0.44
TMOD3-210ENST00000561408 HNRNPUL2Q1KMD3 747 aaKnown RBP12.32□□□□□ -0.44
TMOD3-210ENST00000561408 MYCNP04198 464 aaPredicted RBP12.29□□□□□ -0.44
TMOD3-210ENST00000561408 APLP2Q06481 763 aa12.28□□□□□ -0.44
TMOD3-210ENST00000561408 FOXD4L1Q9NU39 408 aa12.28□□□□□ -0.44
TMOD3-210ENST00000561408 SAMD1Q6SPF0 538 aaPredicted RBP12.26□□□□□ -0.45
TMOD3-210ENST00000561408 TRHP20396 242 aaPredicted RBP12.2□□□□□ -0.46
TMOD3-210ENST00000561408 DSG3P32926 999 aa12.19□□□□□ -0.46
TMOD3-210ENST00000561408 ZNF219Q9P2Y4 722 aaPredicted RBP12.17□□□□□ -0.46
TMOD3-210ENST00000561408 ZBTB22O15209 634 aa12.16□□□□□ -0.46
TMOD3-210ENST00000561408 ABCB7O75027 752 aa12.07□□□□□ -0.48
TMOD3-210ENST00000561408 ATF5Q9Y2D1 282 aaPredicted RBP11.98□□□□□ -0.49
TMOD3-210ENST00000561408 POLA2Q14181 598 aa11.91□□□□□ -0.5
TMOD3-210ENST00000561408 ATXN8OSP0DMR3 200 aa11.87□□□□□ -0.51
TMOD3-210ENST00000561408 CSRNP3Q8WYN3 585 aa11.83□□□□□ -0.52
TMOD3-210ENST00000561408 EHMT2Q96KQ7 1210 aa11.83□□□□□ -0.52
TMOD3-210ENST00000561408 NISCHQ9Y2I1 1504 aa11.81□□□□□ -0.52
TMOD3-210ENST00000561408 ZBTB12Q9Y330 459 aaPredicted RBP11.68□□□□□ -0.54
TMOD3-210ENST00000561408 RBM42Q9BTD8 480 aaKnown RBP11.62□□□□□ -0.55
TMOD3-210ENST00000561408 ABCC9O60706 1549 aa11.61□□□□□ -0.55
TMOD3-210ENST00000561408 OSCARQ8IYS5 282 aa11.52□□□□□ -0.57
TMOD3-210ENST00000561408 FBLN2P98095 1184 aa11.51□□□□□ -0.57
TMOD3-210ENST00000561408 MKRN4PQ13434 485 aaPredicted RBP11.43□□□□□ -0.58
TMOD3-210ENST00000561408 AKT1S1Q96B36 256 aa11.41□□□□□ -0.58
TMOD3-210ENST00000561408 SPDYE2BA6NHP3 402 aa11.33□□□□□ -0.6
TMOD3-210ENST00000561408 SPDYE6P0CI01 402 aa11.33□□□□□ -0.6
TMOD3-210ENST00000561408 SPDYE2Q495Y8 402 aa11.33□□□□□ -0.6
TMOD3-210ENST00000561408 POTEHQ6S545 545 aa11.31□□□□□ -0.6
TMOD3-210ENST00000561408 REM2Q8IYK8 340 aaPredicted RBP11.3□□□□□ -0.6
TMOD3-210ENST00000561408 CHRDL2Q6WN34 429 aa11.27□□□□□ -0.61
TMOD3-210ENST00000561408 ZNF692Q9BU19 519 aaPredicted RBP11.26□□□□□ -0.61
TMOD3-210ENST00000561408 SSUH2Q9Y2M2 353 aa11.2□□□□□ -0.62
TMOD3-210ENST00000561408 PITPNM1O00562 1244 aa11.17□□□□□ -0.62
TMOD3-210ENST00000561408 PABPN1Q86U42 306 aaKnown RBP eCLIP11.1□□□□□ -0.63
TMOD3-210ENST00000561408 SPDYE1Q8NFV5 336 aaPredicted RBP11.09□□□□□ -0.63
TMOD3-210ENST00000561408 CLEC11AQ9Y240 323 aa11.09□□□□□ -0.63
TMOD3-210ENST00000561408 PIP4P2Q8N4L2 257 aa11.06□□□□□ -0.64
TMOD3-210ENST00000561408 SPDYE4A6NLX3 237 aa11.03□□□□□ -0.64
TMOD3-210ENST00000561408 FXR2P51116 673 aaKnown RBP eCLIP11.02□□□□□ -0.65
TMOD3-210ENST00000561408 DNAJC5Q9H3Z4 198 aa10.97□□□□□ -0.65
TMOD3-210ENST00000561408 PRR29P0C7W0 189 aa10.92□□□□□ -0.66
TMOD3-210ENST00000561408 PRKAR2AP13861 404 aaKnown RBP10.91□□□□□ -0.66
TMOD3-210ENST00000561408 CCDC180Q9P1Z9 1646 aa10.87□□□□□ -0.67
TMOD3-210ENST00000561408 CHADLQ6NUI6 762 aa10.84□□□□□ -0.67
TMOD3-210ENST00000561408 STAG3Q9UJ98 1225 aa10.84□□□□□ -0.67
TMOD3-210ENST00000561408 HAX1O00165 279 aa10.81□□□□□ -0.68
TMOD3-210ENST00000561408 PROM2Q8N271 834 aa10.77□□□□□ -0.69
TMOD3-210ENST00000561408 FKBP8Q14318 412 aa10.73□□□□□ -0.69
TMOD3-210ENST00000561408 SP7Q8TDD2 431 aaPredicted RBP10.7□□□□□ -0.7
TMOD3-210ENST00000561408 CREBZFQ9NS37 354 aa10.69□□□□□ -0.7
TMOD3-210ENST00000561408 EVX2Q03828 476 aa10.68□□□□□ -0.7
TMOD3-210ENST00000561408 FARP1Q9Y4F1 1045 aaPredicted RBP10.68□□□□□ -0.7
TMOD3-210ENST00000561408 RB1CC1Q8TDY2 1594 aa10.67□□□□□ -0.7
TMOD3-210ENST00000561408 C19orf67A6NJJ6 358 aa10.66□□□□□ -0.7
TMOD3-210ENST00000561408 UNC13AQ9UPW8 1703 aa10.59□□□□□ -0.71
TMOD3-210ENST00000561408 CD44P16070 742 aaKnown RBP10.57□□□□□ -0.72
TMOD3-210ENST00000561408 NPM1P06748 294 aaKnown RBP eCLIP10.52□□□□□ -0.73
TMOD3-210ENST00000561408 MNX1P50219 401 aaPredicted RBP10.52□□□□□ -0.73
TMOD3-210ENST00000561408 MIER1Q8N108 512 aa10.51□□□□□ -0.73
TMOD3-210ENST00000561408 PLEKHG5O94827 1062 aa10.49□□□□□ -0.73
TMOD3-210ENST00000561408 CECR2Q9BXF3 1484 aa10.48□□□□□ -0.73
TMOD3-210ENST00000561408 GABBR2O75899 941 aa10.46□□□□□ -0.73
TMOD3-210ENST00000561408 PLCD3Q8N3E9 789 aa10.46□□□□□ -0.73
TMOD3-210ENST00000561408 ZRANB1Q9UGI0 708 aa10.46□□□□□ -0.73
TMOD3-210ENST00000561408 BICRAQ9NZM4 1560 aa10.46□□□□□ -0.74
TMOD3-210ENST00000561408 CC2D2AQ9P2K1 1620 aa10.44□□□□□ -0.74
TMOD3-210ENST00000561408 PAK3O75914 559 aaPredicted RBP10.43□□□□□ -0.74
TMOD3-210ENST00000561408 FBXO3Q9UK99 471 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms