RNA–Protein interactions for RNA: ENST00000558090.2

HOMER2-204, Transcript of homer scaffold protein 2, humanhuman

TSL 1 (best)

Gene HOMER2, Length 10,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER2-204ENST00000558090 NISCHQ9Y2I1 1504 aa9.9□□□□□ -0.82
HOMER2-204ENST00000558090 DCAF8L2P0C7V8 631 aa9.25□□□□□ -0.93
HOMER2-204ENST00000558090 PELP1Q8IZL8 1130 aaKnown RBP9.16□□□□□ -0.94
HOMER2-204ENST00000558090 MYT1Q01538 1121 aa9.02□□□□□ -0.97
HOMER2-204ENST00000558090 ERICH6Q7L0X2 663 aa8.86□□□□□ -0.99
HOMER2-204ENST00000558090 CCDC180Q9P1Z9 1646 aa8.72□□□□□ -1.01
HOMER2-204ENST00000558090 CCER1Q8TC90 406 aaPredicted RBP8.72□□□□□ -1.01
HOMER2-204ENST00000558090 TTBK1Q5TCY1 1321 aaPredicted RBP8.7□□□□□ -1.02
HOMER2-204ENST00000558090 SHROOM4Q9ULL8 1493 aa8.63□□□□□ -1.03
HOMER2-204ENST00000558090 YTHDC1Q96MU7 727 aaKnown RBP8.6□□□□□ -1.03
HOMER2-204ENST00000558090 ABCC9O60706 1549 aa8.54□□□□□ -1.04
HOMER2-204ENST00000558090 SUPT5HO00267 1087 aaKnown RBP8.45□□□□□ -1.06
HOMER2-204ENST00000558090 CENPBP07199 599 aaPredicted RBP8.35□□□□□ -1.07
HOMER2-204ENST00000558090 PABPN1Q86U42 306 aaKnown RBP eCLIP8.3□□□□□ -1.08
HOMER2-204ENST00000558090 ZCCHC6Q5VYS8 1495 aaKnown RBP8.28□□□□□ -1.08
HOMER2-204ENST00000558090 DAXXQ9UER7 740 aaPredicted RBP8.24□□□□□ -1.09
HOMER2-204ENST00000558090 DCAF1Q9Y4B6 1507 aa8.22□□□□□ -1.09
HOMER2-204ENST00000558090 FAM9AQ8IZU1 332 aaPredicted RBP8.2□□□□□ -1.1
HOMER2-204ENST00000558090 NEFLP07196 543 aa8.19□□□□□ -1.1
HOMER2-204ENST00000558090 ZEB1P37275 1124 aaPredicted RBP8.18□□□□□ -1.1
HOMER2-204ENST00000558090 RANGAP1P46060 587 aaPredicted RBP8.17□□□□□ -1.1
HOMER2-204ENST00000558090 NACADO15069 1562 aa8.17□□□□□ -1.1
HOMER2-204ENST00000558090 APLP2Q06481 763 aa8.15□□□□□ -1.1
HOMER2-204ENST00000558090 RB1CC1Q8TDY2 1594 aa8.13□□□□□ -1.11
HOMER2-204ENST00000558090 GLIPR1L2Q4G1C9 344 aa8.12□□□□□ -1.11
HOMER2-204ENST00000558090 RTL5Q5HYW3 569 aaPredicted RBP8.09□□□□□ -1.11
HOMER2-204ENST00000558090 MYO15BQ96JP2 1530 aa8.08□□□□□ -1.12
HOMER2-204ENST00000558090 EHMT2Q96KQ7 1210 aa8.08□□□□□ -1.12
HOMER2-204ENST00000558090 TRIM41Q8WV44 630 aa8.07□□□□□ -1.12
HOMER2-204ENST00000558090 SCRIBQ14160 1630 aa8.04□□□□□ -1.12
HOMER2-204ENST00000558090 EIF5BO60841 1220 aaKnown RBP8.01□□□□□ -1.13
HOMER2-204ENST00000558090 ZNF316A6NFI3 1004 aaPredicted RBP7.97□□□□□ -1.13
HOMER2-204ENST00000558090 CHIC1Q5VXU3 224 aa7.87□□□□□ -1.15
HOMER2-204ENST00000558090 UBTFP17480 764 aaKnown RBP7.86□□□□□ -1.15
HOMER2-204ENST00000558090 CLSPNQ9HAW4 1339 aa7.86□□□□□ -1.15
HOMER2-204ENST00000558090 BAZ1AQ9NRL2 1556 aaPredicted RBP7.86□□□□□ -1.15
HOMER2-204ENST00000558090 PCGF6Q9BYE7 350 aa7.82□□□□□ -1.16
HOMER2-204ENST00000558090 TRIM26Q12899 539 aaPredicted RBP7.82□□□□□ -1.16
HOMER2-204ENST00000558090 EEA1Q15075 1411 aa7.79□□□□□ -1.16
HOMER2-204ENST00000558090 HRCP23327 699 aa7.76□□□□□ -1.17
HOMER2-204ENST00000558090 ATP1B4Q9UN42 357 aaPredicted RBP7.74□□□□□ -1.17
HOMER2-204ENST00000558090 SMARCA2P51531 1590 aa7.74□□□□□ -1.17
HOMER2-204ENST00000558090 POLR3GLQ9BT43 218 aa7.73□□□□□ -1.17
HOMER2-204ENST00000558090 TNNT2P45379 298 aaPredicted RBP7.72□□□□□ -1.17
HOMER2-204ENST00000558090 UNC13AQ9UPW8 1703 aa7.72□□□□□ -1.17
HOMER2-204ENST00000558090 ANP32BQ92688 251 aaKnown RBP7.71□□□□□ -1.18
HOMER2-204ENST00000558090 CDK11BP21127 795 aaKnown RBP7.69□□□□□ -1.18
HOMER2-204ENST00000558090 RSF1Q96T23 1441 aaPredicted RBP7.68□□□□□ -1.18
HOMER2-204ENST00000558090 BAZ1BQ9UIG0 1483 aaKnown RBP7.68□□□□□ -1.18
HOMER2-204ENST00000558090 MYT1LQ9UL68 1186 aa7.67□□□□□ -1.18
HOMER2-204ENST00000558090 ACIN1Q9UKV3 1341 aaKnown RBP7.65□□□□□ -1.18
HOMER2-204ENST00000558090 FBLN2P98095 1184 aa7.64□□□□□ -1.19
HOMER2-204ENST00000558090 TOP2AP11388 1531 aaKnown RBP7.64□□□□□ -1.19
HOMER2-204ENST00000558090 SMARCA4P51532 1647 aa7.62□□□□□ -1.19
HOMER2-204ENST00000558090 CECR2Q9BXF3 1484 aa7.6□□□□□ -1.19
HOMER2-204ENST00000558090 CSRNP3Q8WYN3 585 aa7.59□□□□□ -1.19
HOMER2-204ENST00000558090 ZNF326Q5BKZ1 582 aaKnown RBP7.58□□□□□ -1.2
HOMER2-204ENST00000558090 CDK11AQ9UQ88 783 aaPredicted RBP7.58□□□□□ -1.2
HOMER2-204ENST00000558090 GOLGA3Q08378 1498 aa7.57□□□□□ -1.2
HOMER2-204ENST00000558090 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.56□□□□□ -1.2
HOMER2-204ENST00000558090 HNRNPUL2Q1KMD3 747 aaKnown RBP7.56□□□□□ -1.2
HOMER2-204ENST00000558090 AMER1Q5JTC6 1135 aaPredicted RBP7.56□□□□□ -1.2
HOMER2-204ENST00000558090 TRIM44Q96DX7 344 aaPredicted RBP7.55□□□□□ -1.2
HOMER2-204ENST00000558090 CEP164Q9UPV0 1460 aa7.55□□□□□ -1.2
HOMER2-204ENST00000558090 WRNQ14191 1432 aaPredicted RBP eCLIP7.54□□□□□ -1.2
HOMER2-204ENST00000558090 ERCC6Q03468 1493 aa7.53□□□□□ -1.2
HOMER2-204ENST00000558090 KIF27Q86VH2 1401 aa7.53□□□□□ -1.2
HOMER2-204ENST00000558090 ANP32AP39687 249 aaKnown RBP7.52□□□□□ -1.21
HOMER2-204ENST00000558090 NCLP19338 710 aaKnown RBP7.52□□□□□ -1.21
HOMER2-204ENST00000558090 WIZO95785 1651 aa7.51□□□□□ -1.21
HOMER2-204ENST00000558090 ZBTB47Q9UFB7 747 aaPredicted RBP7.51□□□□□ -1.21
HOMER2-204ENST00000558090 LOC105371045A0A1W2PR82 267 aa7.51□□□□□ -1.21
HOMER2-204ENST00000558090 MROH2BQ7Z745 1585 aa7.5□□□□□ -1.21
HOMER2-204ENST00000558090 CALRP27797 417 aaKnown RBP7.5□□□□□ -1.21
HOMER2-204ENST00000558090 PPARGC1BQ86YN6 1023 aaKnown RBP7.49□□□□□ -1.21
HOMER2-204ENST00000558090 ABCC8Q09428 1581 aa7.48□□□□□ -1.21
HOMER2-204ENST00000558090 TNIKQ9UKE5 1360 aa7.47□□□□□ -1.21
HOMER2-204ENST00000558090 CLIP1P30622 1438 aa7.47□□□□□ -1.21
HOMER2-204ENST00000558090 DNAJC5BQ9UF47 199 aa7.47□□□□□ -1.21
HOMER2-204ENST00000558090 P3H3Q8IVL6 736 aa7.45□□□□□ -1.22
HOMER2-204ENST00000558090 FHAD1B1AJZ9 1412 aa7.44□□□□□ -1.22
HOMER2-204ENST00000558090 CCDC88BA6NC98 1476 aa7.44□□□□□ -1.22
HOMER2-204ENST00000558090 DIEXFQ68CQ4 756 aaKnown RBP7.43□□□□□ -1.22
HOMER2-204ENST00000558090 HSP90AA1P07900 732 aaKnown RBP7.43□□□□□ -1.22
HOMER2-204ENST00000558090 HMGXB3Q12766 1538 aa7.43□□□□□ -1.22
HOMER2-204ENST00000558090 SLC24A1O60721 1099 aa7.42□□□□□ -1.22
HOMER2-204ENST00000558090 GTF3C3Q9Y5Q9 886 aa7.42□□□□□ -1.22
HOMER2-204ENST00000558090 ATAD2BQ9ULI0 1458 aa7.42□□□□□ -1.22
HOMER2-204ENST00000558090 CNGB1Q14028 1251 aaPredicted RBP7.42□□□□□ -1.22
HOMER2-204ENST00000558090 ARID3CA6NKF2 412 aa7.41□□□□□ -1.22
HOMER2-204ENST00000558090 PDS5BQ9NTI5 1447 aa7.41□□□□□ -1.22
HOMER2-204ENST00000558090 CEP162Q5TB80 1403 aa7.41□□□□□ -1.22
HOMER2-204ENST00000558090 BCANQ96GW7 911 aa7.41□□□□□ -1.22
HOMER2-204ENST00000558090 EIF4G1Q04637 1599 aaKnown RBP7.4□□□□□ -1.22
HOMER2-204ENST00000558090 CHMP7Q8WUX9 453 aaPredicted RBP7.4□□□□□ -1.22
HOMER2-204ENST00000558090 ARXQ96QS3 562 aa7.39□□□□□ -1.23
HOMER2-204ENST00000558090 NBR1Q14596 966 aa7.39□□□□□ -1.23
HOMER2-204ENST00000558090 CC2D2AQ9P2K1 1620 aa7.38□□□□□ -1.23
HOMER2-204ENST00000558090 FAM50AQ14320 339 aaKnown RBP7.38□□□□□ -1.23
HOMER2-204ENST00000558090 NPM2Q86SE8 214 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms