RNA–Protein interactions for RNA: ENST00000556227.1

SPTB-207, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 2

Gene SPTB, Length 4,741 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-207ENST00000556227 NISCHQ9Y2I1 1504 aa26.54■■□□□ 1.84
SPTB-207ENST00000556227 DCAF8L2P0C7V8 631 aa24.99■■□□□ 1.59
SPTB-207ENST00000556227 SUPT5HO00267 1087 aaKnown RBP23.95■■□□□ 1.42
SPTB-207ENST00000556227 SHROOM4Q9ULL8 1493 aa23.78■■□□□ 1.4
SPTB-207ENST00000556227 APLP2Q06481 763 aa22.63■■□□□ 1.21
SPTB-207ENST00000556227 TRIM41Q8WV44 630 aa22.56■■□□□ 1.2
SPTB-207ENST00000556227 FAM9AQ8IZU1 332 aaPredicted RBP22.41■■□□□ 1.18
SPTB-207ENST00000556227 CCDC180Q9P1Z9 1646 aa22.37■■□□□ 1.17
SPTB-207ENST00000556227 ZEB1P37275 1124 aaPredicted RBP22.29■■□□□ 1.16
SPTB-207ENST00000556227 EHMT2Q96KQ7 1210 aa22.29■■□□□ 1.16
SPTB-207ENST00000556227 ZCCHC6Q5VYS8 1495 aaKnown RBP22.13■■□□□ 1.13
SPTB-207ENST00000556227 PCGF6Q9BYE7 350 aa22.1■■□□□ 1.13
SPTB-207ENST00000556227 ABCC9O60706 1549 aa22.04■■□□□ 1.12
SPTB-207ENST00000556227 CHIC1Q5VXU3 224 aa22.03■■□□□ 1.12
SPTB-207ENST00000556227 UBTFP17480 764 aaKnown RBP22■■□□□ 1.11
SPTB-207ENST00000556227 PELP1Q8IZL8 1130 aaKnown RBP21.94■■□□□ 1.1
SPTB-207ENST00000556227 TRIM26Q12899 539 aaPredicted RBP21.81■■□□□ 1.08
SPTB-207ENST00000556227 CCER1Q8TC90 406 aaPredicted RBP21.74■■□□□ 1.07
SPTB-207ENST00000556227 TTBK1Q5TCY1 1321 aaPredicted RBP21.59■■□□□ 1.05
SPTB-207ENST00000556227 RANGAP1P46060 587 aaPredicted RBP21.58■■□□□ 1.04
SPTB-207ENST00000556227 DCAF1Q9Y4B6 1507 aa21.56■■□□□ 1.04
SPTB-207ENST00000556227 CENPBP07199 599 aaPredicted RBP21.55■■□□□ 1.04
SPTB-207ENST00000556227 ATP1B4Q9UN42 357 aaPredicted RBP21.51■■□□□ 1.03
SPTB-207ENST00000556227 SCRIBQ14160 1630 aa21.45■■□□□ 1.02
SPTB-207ENST00000556227 PABPN1Q86U42 306 aaKnown RBP eCLIP21.44■■□□□ 1.02
SPTB-207ENST00000556227 NACADO15069 1562 aa21.44■■□□□ 1.02
SPTB-207ENST00000556227 LOC105371045A0A1W2PR82 267 aa21.43■■□□□ 1.02
SPTB-207ENST00000556227 HRCP23327 699 aa21.42■■□□□ 1.02
SPTB-207ENST00000556227 RB1CC1Q8TDY2 1594 aa21.41■■□□□ 1.02
SPTB-207ENST00000556227 PPARGC1BQ86YN6 1023 aaKnown RBP21.1■□□□□ 0.97
SPTB-207ENST00000556227 CSRNP3Q8WYN3 585 aa21.09■□□□□ 0.97
SPTB-207ENST00000556227 MYO15BQ96JP2 1530 aa21.06■□□□□ 0.96
SPTB-207ENST00000556227 RSF1Q96T23 1441 aaPredicted RBP21■□□□□ 0.95
SPTB-207ENST00000556227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.95■□□□□ 0.94
SPTB-207ENST00000556227 HNRNPUL2Q1KMD3 747 aaKnown RBP20.95■□□□□ 0.94
SPTB-207ENST00000556227 EEA1Q15075 1411 aa20.92■□□□□ 0.94
SPTB-207ENST00000556227 NEFLP07196 543 aa20.92■□□□□ 0.94
SPTB-207ENST00000556227 BAZ1AQ9NRL2 1556 aaPredicted RBP20.89■□□□□ 0.93
SPTB-207ENST00000556227 ITGAEP38570 1179 aa20.86■□□□□ 0.93
SPTB-207ENST00000556227 FAM50AQ14320 339 aaKnown RBP20.7■□□□□ 0.9
SPTB-207ENST00000556227 BAZ1BQ9UIG0 1483 aaKnown RBP20.67■□□□□ 0.9
SPTB-207ENST00000556227 YTHDC1Q96MU7 727 aaKnown RBP20.61■□□□□ 0.89
SPTB-207ENST00000556227 DIEXFQ68CQ4 756 aaKnown RBP20.6■□□□□ 0.89
SPTB-207ENST00000556227 MYT1LQ9UL68 1186 aa20.58■□□□□ 0.89
SPTB-207ENST00000556227 CDK11AQ9UQ88 783 aaPredicted RBP20.58■□□□□ 0.89
SPTB-207ENST00000556227 WRNQ14191 1432 aaPredicted RBP eCLIP20.56■□□□□ 0.88
SPTB-207ENST00000556227 ERICH6Q7L0X2 663 aa20.56■□□□□ 0.88
SPTB-207ENST00000556227 GOLGA3Q08378 1498 aa20.55■□□□□ 0.88
SPTB-207ENST00000556227 TRIM52Q96A61 297 aa20.47■□□□□ 0.87
SPTB-207ENST00000556227 MYT1Q01538 1121 aa20.47■□□□□ 0.87
SPTB-207ENST00000556227 CECR2Q9BXF3 1484 aa20.45■□□□□ 0.86
SPTB-207ENST00000556227 CLIP1P30622 1438 aa20.44■□□□□ 0.86
SPTB-207ENST00000556227 CEP164Q9UPV0 1460 aa20.44■□□□□ 0.86
SPTB-207ENST00000556227 SMARCA2P51531 1590 aa20.44■□□□□ 0.86
SPTB-207ENST00000556227 TNIKQ9UKE5 1360 aa20.44■□□□□ 0.86
SPTB-207ENST00000556227 ZNF316A6NFI3 1004 aaPredicted RBP20.42■□□□□ 0.86
SPTB-207ENST00000556227 ACIN1Q9UKV3 1341 aaKnown RBP20.42■□□□□ 0.86
SPTB-207ENST00000556227 KIF27Q86VH2 1401 aa20.41■□□□□ 0.86
SPTB-207ENST00000556227 FBLN2P98095 1184 aa20.37■□□□□ 0.85
SPTB-207ENST00000556227 MROH2BQ7Z745 1585 aa20.35■□□□□ 0.85
SPTB-207ENST00000556227 CEP162Q5TB80 1403 aa20.34■□□□□ 0.85
SPTB-207ENST00000556227 TOP2AP11388 1531 aaKnown RBP20.3■□□□□ 0.84
SPTB-207ENST00000556227 P3H3Q8IVL6 736 aa20.3■□□□□ 0.84
SPTB-207ENST00000556227 POLR3GLQ9BT43 218 aa20.29■□□□□ 0.84
SPTB-207ENST00000556227 NEUROD1Q13562 356 aa20.29■□□□□ 0.84
SPTB-207ENST00000556227 ANP32CO43423 234 aa20.26■□□□□ 0.83
SPTB-207ENST00000556227 CCDC88BA6NC98 1476 aa20.22■□□□□ 0.83
SPTB-207ENST00000556227 MTUS2Q5JR59 1369 aa20.17■□□□□ 0.82
SPTB-207ENST00000556227 CLSPNQ9HAW4 1339 aa20.17■□□□□ 0.82
SPTB-207ENST00000556227 TONSLQ96HA7 1378 aa20.12■□□□□ 0.81
SPTB-207ENST00000556227 SMARCA4P51532 1647 aa20.09■□□□□ 0.81
SPTB-207ENST00000556227 FHAD1B1AJZ9 1412 aa20.08■□□□□ 0.81
SPTB-207ENST00000556227 CHMP7Q8WUX9 453 aaPredicted RBP20.06■□□□□ 0.8
SPTB-207ENST00000556227 WIZO95785 1651 aa20.04■□□□□ 0.8
SPTB-207ENST00000556227 ZNF777Q9ULD5 760 aaPredicted RBP20.01■□□□□ 0.79
SPTB-207ENST00000556227 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
SPTB-207ENST00000556227 DAXXQ9UER7 740 aaPredicted RBP19.99■□□□□ 0.79
SPTB-207ENST00000556227 NPM1P06748 294 aaKnown RBP eCLIP19.97■□□□□ 0.79
SPTB-207ENST00000556227 PDS5BQ9NTI5 1447 aa19.97■□□□□ 0.79
SPTB-207ENST00000556227 CARMIL1Q5VZK9 1371 aa19.96■□□□□ 0.79
SPTB-207ENST00000556227 TSPY4P0CV99 314 aa19.95■□□□□ 0.78
SPTB-207ENST00000556227 TSPY10P0CW01 314 aa19.95■□□□□ 0.78
SPTB-207ENST00000556227 CUX2O14529 1486 aa19.95■□□□□ 0.78
SPTB-207ENST00000556227 ZNF326Q5BKZ1 582 aaKnown RBP19.94■□□□□ 0.78
SPTB-207ENST00000556227 SOGA1O94964 1423 aa19.94■□□□□ 0.78
SPTB-207ENST00000556227 VPS8Q8N3P4 1428 aa19.92■□□□□ 0.78
SPTB-207ENST00000556227 ARID3CA6NKF2 412 aa19.92■□□□□ 0.78
SPTB-207ENST00000556227 SLC4A1APQ9BWU0 796 aaKnown RBP19.9■□□□□ 0.78
SPTB-207ENST00000556227 CADPSQ9ULU8 1353 aa19.87■□□□□ 0.77
SPTB-207ENST00000556227 ABCC8Q09428 1581 aa19.87■□□□□ 0.77
SPTB-207ENST00000556227 PLEKHD1A6NEE1 506 aa19.85■□□□□ 0.77
SPTB-207ENST00000556227 ERCC6Q03468 1493 aa19.84■□□□□ 0.77
SPTB-207ENST00000556227 GTF3C3Q9Y5Q9 886 aa19.83■□□□□ 0.76
SPTB-207ENST00000556227 TIMELESSQ9UNS1 1208 aa19.81■□□□□ 0.76
SPTB-207ENST00000556227 CNGB1Q14028 1251 aaPredicted RBP19.8■□□□□ 0.76
SPTB-207ENST00000556227 CCNB3Q8WWL7 1395 aa19.78■□□□□ 0.76
SPTB-207ENST00000556227 FMN1Q68DA7 1419 aa19.75■□□□□ 0.75
SPTB-207ENST00000556227 CHIC2Q9UKJ5 165 aa19.73■□□□□ 0.75
SPTB-207ENST00000556227 NEFMP07197 916 aa19.71■□□□□ 0.75
SPTB-207ENST00000556227 NCAPD3P42695 1498 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms