RNA–Protein interactions for RNA: ENST00000555527.1

GPHN-209, Transcript of gephyrin, humanhuman

TSL 5

Gene GPHN, Length 493 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-209ENST00000555527 AEBP2Q6ZN18 517 aaPredicted RBP17.2■□□□□ 0.34
GPHN-209ENST00000555527 CHIC1Q5VXU3 224 aa16.4■□□□□ 0.22
GPHN-209ENST00000555527 SENP3Q9H4L4 574 aaPredicted RBP14.79□□□□□ -0.04
GPHN-209ENST00000555527 PHF23Q9BUL5 403 aaPredicted RBP14.53□□□□□ -0.08
GPHN-209ENST00000555527 FOXD1Q16676 465 aa13.7□□□□□ -0.22
GPHN-209ENST00000555527 PLPPR3Q6T4P5 718 aa13.14□□□□□ -0.31
GPHN-209ENST00000555527 MSH5O43196 834 aa12.93□□□□□ -0.34
GPHN-209ENST00000555527 PIAS4Q8N2W9 510 aaPredicted RBP12.85□□□□□ -0.35
GPHN-209ENST00000555527 PPP6R1Q9UPN7 881 aa12.76□□□□□ -0.37
GPHN-209ENST00000555527 ADRA2BP18089 450 aa12.73□□□□□ -0.37
GPHN-209ENST00000555527 POTEDQ86YR6 584 aa12.55□□□□□ -0.4
GPHN-209ENST00000555527 SCAF1Q9H7N4 1312 aaKnown RBP11.77□□□□□ -0.53
GPHN-209ENST00000555527 DMRT2Q9Y5R5 561 aa11.7□□□□□ -0.54
GPHN-209ENST00000555527 MAPK8IP2Q13387 824 aaPredicted RBP11.66□□□□□ -0.54
GPHN-209ENST00000555527 PPP4R3CPQ6ZMV5 832 aa11.46□□□□□ -0.57
GPHN-209ENST00000555527 CNKSR2Q8WXI2 1034 aa11.29□□□□□ -0.6
GPHN-209ENST00000555527 HOXD11P31277 338 aaPredicted RBP11.27□□□□□ -0.61
GPHN-209ENST00000555527 RNF216Q9NWF9 866 aaPredicted RBP11.2□□□□□ -0.62
GPHN-209ENST00000555527 DCAF8L1A6NGE4 600 aa11.19□□□□□ -0.62
GPHN-209ENST00000555527 NISCHQ9Y2I1 1504 aa11.19□□□□□ -0.62
GPHN-209ENST00000555527 NCBP3Q53F19 620 aaKnown RBP11.09□□□□□ -0.63
GPHN-209ENST00000555527 CACNB1Q02641 598 aaPredicted RBP11.04□□□□□ -0.64
GPHN-209ENST00000555527 RNF39Q9H2S5 420 aa10.98□□□□□ -0.65
GPHN-209ENST00000555527 DNAJC5BQ9UF47 199 aa10.95□□□□□ -0.66
GPHN-209ENST00000555527 C1QBPQ07021 282 aaKnown RBP10.86□□□□□ -0.67
GPHN-209ENST00000555527 NPM3O75607 178 aaKnown RBP10.85□□□□□ -0.67
GPHN-209ENST00000555527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.73□□□□□ -0.69
GPHN-209ENST00000555527 KCNA4P22459 653 aa10.62□□□□□ -0.71
GPHN-209ENST00000555527 U3KPZ7 1027 aaPredicted RBP10.48□□□□□ -0.73
GPHN-209ENST00000555527 SLC4A2P04920 1241 aa10.35□□□□□ -0.75
GPHN-209ENST00000555527 CAPN15O75808 1086 aa10.33□□□□□ -0.76
GPHN-209ENST00000555527 APLP2Q06481 763 aa10.32□□□□□ -0.76
GPHN-209ENST00000555527 SPINK5Q9NQ38 1064 aaPredicted RBP10.3□□□□□ -0.76
GPHN-209ENST00000555527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.29□□□□□ -0.76
GPHN-209ENST00000555527 HNRNPUL2Q1KMD3 747 aaKnown RBP10.29□□□□□ -0.76
GPHN-209ENST00000555527 DSG3P32926 999 aa10.26□□□□□ -0.77
GPHN-209ENST00000555527 ZNF219Q9P2Y4 722 aaPredicted RBP10.21□□□□□ -0.77
GPHN-209ENST00000555527 SAMD1Q6SPF0 538 aaPredicted RBP10.2□□□□□ -0.78
GPHN-209ENST00000555527 TRHP20396 242 aaPredicted RBP10.15□□□□□ -0.78
GPHN-209ENST00000555527 ABCC9O60706 1549 aa10.14□□□□□ -0.79
GPHN-209ENST00000555527 MYCNP04198 464 aaPredicted RBP10.1□□□□□ -0.79
GPHN-209ENST00000555527 SLC4A1APQ9BWU0 796 aaKnown RBP10.06□□□□□ -0.8
GPHN-209ENST00000555527 ABCB7O75027 752 aa10.05□□□□□ -0.8
GPHN-209ENST00000555527 FOXD4L1Q9NU39 408 aa9.98□□□□□ -0.81
GPHN-209ENST00000555527 CCDC180Q9P1Z9 1646 aa9.96□□□□□ -0.81
GPHN-209ENST00000555527 RBM42Q9BTD8 480 aaKnown RBP9.89□□□□□ -0.83
GPHN-209ENST00000555527 POLA2Q14181 598 aa9.87□□□□□ -0.83
GPHN-209ENST00000555527 POTEHQ6S545 545 aa9.85□□□□□ -0.83
GPHN-209ENST00000555527 ZBTB12Q9Y330 459 aaPredicted RBP9.78□□□□□ -0.84
GPHN-209ENST00000555527 ATF5Q9Y2D1 282 aaPredicted RBP9.75□□□□□ -0.85
GPHN-209ENST00000555527 ZBTB22O15209 634 aa9.73□□□□□ -0.85
GPHN-209ENST00000555527 ATXN8OSP0DMR3 200 aa9.7□□□□□ -0.86
GPHN-209ENST00000555527 DCAF8L2P0C7V8 631 aa9.62□□□□□ -0.87
GPHN-209ENST00000555527 CHRDL2Q6WN34 429 aa9.61□□□□□ -0.87
GPHN-209ENST00000555527 AKT1S1Q96B36 256 aa9.61□□□□□ -0.87
GPHN-209ENST00000555527 RB1CC1Q8TDY2 1594 aa9.6□□□□□ -0.87
GPHN-209ENST00000555527 OSCARQ8IYS5 282 aa9.57□□□□□ -0.88
GPHN-209ENST00000555527 NACADO15069 1562 aa9.53□□□□□ -0.88
GPHN-209ENST00000555527 FBLN2P98095 1184 aa9.5□□□□□ -0.89
GPHN-209ENST00000555527 PABPN1Q86U42 306 aaKnown RBP eCLIP9.49□□□□□ -0.89
GPHN-209ENST00000555527 REM2Q8IYK8 340 aaPredicted RBP9.47□□□□□ -0.89
GPHN-209ENST00000555527 SPDYE2BA6NHP3 402 aa9.44□□□□□ -0.9
GPHN-209ENST00000555527 SPDYE6P0CI01 402 aa9.44□□□□□ -0.9
GPHN-209ENST00000555527 SPDYE2Q495Y8 402 aa9.44□□□□□ -0.9
GPHN-209ENST00000555527 MYO15BQ96JP2 1530 aa9.38□□□□□ -0.91
GPHN-209ENST00000555527 PITPNM1O00562 1244 aa9.38□□□□□ -0.91
GPHN-209ENST00000555527 PIP4P2Q8N4L2 257 aa9.35□□□□□ -0.91
GPHN-209ENST00000555527 MKRN4PQ13434 485 aaPredicted RBP9.33□□□□□ -0.92
GPHN-209ENST00000555527 FXR2P51116 673 aaKnown RBP eCLIP9.31□□□□□ -0.92
GPHN-209ENST00000555527 CSRNP3Q8WYN3 585 aa9.29□□□□□ -0.92
GPHN-209ENST00000555527 ZNF692Q9BU19 519 aaPredicted RBP9.28□□□□□ -0.92
GPHN-209ENST00000555527 SSUH2Q9Y2M2 353 aa9.28□□□□□ -0.92
GPHN-209ENST00000555527 SPDYE1Q8NFV5 336 aaPredicted RBP9.27□□□□□ -0.93
GPHN-209ENST00000555527 SP7Q8TDD2 431 aaPredicted RBP9.25□□□□□ -0.93
GPHN-209ENST00000555527 ZCCHC6Q5VYS8 1495 aaKnown RBP9.25□□□□□ -0.93
GPHN-209ENST00000555527 BICRAQ9NZM4 1560 aa9.24□□□□□ -0.93
GPHN-209ENST00000555527 SHROOM4Q9ULL8 1493 aa9.23□□□□□ -0.93
GPHN-209ENST00000555527 DCAF1Q9Y4B6 1507 aa9.23□□□□□ -0.93
GPHN-209ENST00000555527 CLEC11AQ9Y240 323 aa9.21□□□□□ -0.94
GPHN-209ENST00000555527 HAX1O00165 279 aa9.19□□□□□ -0.94
GPHN-209ENST00000555527 EHMT2Q96KQ7 1210 aa9.17□□□□□ -0.94
GPHN-209ENST00000555527 CECR2Q9BXF3 1484 aa9.16□□□□□ -0.94
GPHN-209ENST00000555527 UNC13AQ9UPW8 1703 aa9.15□□□□□ -0.94
GPHN-209ENST00000555527 PRKAR2AP13861 404 aaKnown RBP9.14□□□□□ -0.95
GPHN-209ENST00000555527 SCRIBQ14160 1630 aa9.13□□□□□ -0.95
GPHN-209ENST00000555527 CC2D2AQ9P2K1 1620 aa9.09□□□□□ -0.95
GPHN-209ENST00000555527 EIF4G1Q04637 1599 aaKnown RBP9.08□□□□□ -0.96
GPHN-209ENST00000555527 PRR29P0C7W0 189 aa9.08□□□□□ -0.96
GPHN-209ENST00000555527 C19orf67A6NJJ6 358 aa9.01□□□□□ -0.97
GPHN-209ENST00000555527 EVX2Q03828 476 aa9□□□□□ -0.97
GPHN-209ENST00000555527 CHADLQ6NUI6 762 aa8.99□□□□□ -0.97
GPHN-209ENST00000555527 STAG3Q9UJ98 1225 aa8.95□□□□□ -0.98
GPHN-209ENST00000555527 SPDYE4A6NLX3 237 aa8.94□□□□□ -0.98
GPHN-209ENST00000555527 FARP1Q9Y4F1 1045 aaPredicted RBP8.91□□□□□ -0.98
GPHN-209ENST00000555527 DNAJC5Q9H3Z4 198 aa8.88□□□□□ -0.99
GPHN-209ENST00000555527 GABBR2O75899 941 aa8.86□□□□□ -0.99
GPHN-209ENST00000555527 CD44P16070 742 aaKnown RBP8.86□□□□□ -0.99
GPHN-209ENST00000555527 CLCN6P51797 869 aa8.85□□□□□ -0.99
GPHN-209ENST00000555527 NCAPD3P42695 1498 aa8.83□□□□□ -1
GPHN-209ENST00000555527 ERCC6Q03468 1493 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms