RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 NISCHQ9Y2I1 1504 aa7.18□□□□□ -1.26
KTN1-217ENST00000554831 DCAF8L2P0C7V8 631 aa6.61□□□□□ -1.35
KTN1-217ENST00000554831 SUPT5HO00267 1087 aaKnown RBP6.57□□□□□ -1.36
KTN1-217ENST00000554831 SHROOM4Q9ULL8 1493 aa6.49□□□□□ -1.37
KTN1-217ENST00000554831 PCGF6Q9BYE7 350 aa6.25□□□□□ -1.41
KTN1-217ENST00000554831 CHIC1Q5VXU3 224 aa6.21□□□□□ -1.41
KTN1-217ENST00000554831 HRCP23327 699 aa6.17□□□□□ -1.42
KTN1-217ENST00000554831 TRIM41Q8WV44 630 aa6.12□□□□□ -1.43
KTN1-217ENST00000554831 ZEB1P37275 1124 aaPredicted RBP6.12□□□□□ -1.43
KTN1-217ENST00000554831 FAM9AQ8IZU1 332 aaPredicted RBP6.11□□□□□ -1.43
KTN1-217ENST00000554831 TRIM26Q12899 539 aaPredicted RBP6.08□□□□□ -1.44
KTN1-217ENST00000554831 EHMT2Q96KQ7 1210 aa6.07□□□□□ -1.44
KTN1-217ENST00000554831 LOC105371045A0A1W2PR82 267 aa6.06□□□□□ -1.44
KTN1-217ENST00000554831 ZCCHC6Q5VYS8 1495 aaKnown RBP6.01□□□□□ -1.45
KTN1-217ENST00000554831 CCER1Q8TC90 406 aaPredicted RBP5.97□□□□□ -1.45
KTN1-217ENST00000554831 APLP2Q06481 763 aa5.97□□□□□ -1.45
KTN1-217ENST00000554831 PELP1Q8IZL8 1130 aaKnown RBP5.96□□□□□ -1.45
KTN1-217ENST00000554831 PPARGC1BQ86YN6 1023 aaKnown RBP5.96□□□□□ -1.46
KTN1-217ENST00000554831 CENPBP07199 599 aaPredicted RBP5.94□□□□□ -1.46
KTN1-217ENST00000554831 UBTFP17480 764 aaKnown RBP5.92□□□□□ -1.46
KTN1-217ENST00000554831 TTBK1Q5TCY1 1321 aaPredicted RBP5.89□□□□□ -1.47
KTN1-217ENST00000554831 DCAF1Q9Y4B6 1507 aa5.89□□□□□ -1.47
KTN1-217ENST00000554831 CCDC180Q9P1Z9 1646 aa5.88□□□□□ -1.47
KTN1-217ENST00000554831 MYO15BQ96JP2 1530 aa5.83□□□□□ -1.48
KTN1-217ENST00000554831 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.82□□□□□ -1.48
KTN1-217ENST00000554831 DIEXFQ68CQ4 756 aaKnown RBP5.79□□□□□ -1.48
KTN1-217ENST00000554831 RANGAP1P46060 587 aaPredicted RBP5.78□□□□□ -1.48
KTN1-217ENST00000554831 ABCC9O60706 1549 aa5.78□□□□□ -1.48
KTN1-217ENST00000554831 RSF1Q96T23 1441 aaPredicted RBP5.77□□□□□ -1.49
KTN1-217ENST00000554831 CSRNP3Q8WYN3 585 aa5.77□□□□□ -1.49
KTN1-217ENST00000554831 MYT1Q01538 1121 aa5.76□□□□□ -1.49
KTN1-217ENST00000554831 HNRNPUL2Q1KMD3 747 aaKnown RBP5.76□□□□□ -1.49
KTN1-217ENST00000554831 YTHDC1Q96MU7 727 aaKnown RBP5.73□□□□□ -1.49
KTN1-217ENST00000554831 ACIN1Q9UKV3 1341 aaKnown RBP5.71□□□□□ -1.5
KTN1-217ENST00000554831 ZNF316A6NFI3 1004 aaPredicted RBP5.7□□□□□ -1.5
KTN1-217ENST00000554831 SCRIBQ14160 1630 aa5.69□□□□□ -1.5
KTN1-217ENST00000554831 GTF3C3Q9Y5Q9 886 aa5.68□□□□□ -1.5
KTN1-217ENST00000554831 PABPN1Q86U42 306 aaKnown RBP eCLIP5.67□□□□□ -1.5
KTN1-217ENST00000554831 ATP1B4Q9UN42 357 aaPredicted RBP5.67□□□□□ -1.5
KTN1-217ENST00000554831 NEFLP07196 543 aa5.65□□□□□ -1.51
KTN1-217ENST00000554831 ITGAEP38570 1179 aa5.65□□□□□ -1.51
KTN1-217ENST00000554831 EEA1Q15075 1411 aa5.65□□□□□ -1.51
KTN1-217ENST00000554831 RB1CC1Q8TDY2 1594 aa5.63□□□□□ -1.51
KTN1-217ENST00000554831 NEUROD1Q13562 356 aa5.63□□□□□ -1.51
KTN1-217ENST00000554831 SCAF1Q9H7N4 1312 aaKnown RBP5.63□□□□□ -1.51
KTN1-217ENST00000554831 NACADO15069 1562 aa5.62□□□□□ -1.51
KTN1-217ENST00000554831 CECR2Q9BXF3 1484 aa5.62□□□□□ -1.51
KTN1-217ENST00000554831 TNIKQ9UKE5 1360 aa5.61□□□□□ -1.51
KTN1-217ENST00000554831 CEP162Q5TB80 1403 aa5.59□□□□□ -1.51
KTN1-217ENST00000554831 BAZ1AQ9NRL2 1556 aaPredicted RBP5.58□□□□□ -1.52
KTN1-217ENST00000554831 CLSPNQ9HAW4 1339 aa5.57□□□□□ -1.52
KTN1-217ENST00000554831 CLIP1P30622 1438 aa5.57□□□□□ -1.52
KTN1-217ENST00000554831 MROH2BQ7Z745 1585 aa5.56□□□□□ -1.52
KTN1-217ENST00000554831 WRNQ14191 1432 aaPredicted RBP eCLIP5.55□□□□□ -1.52
KTN1-217ENST00000554831 GOLGA3Q08378 1498 aa5.55□□□□□ -1.52
KTN1-217ENST00000554831 FAM50AQ14320 339 aaKnown RBP5.54□□□□□ -1.52
KTN1-217ENST00000554831 MIER1Q8N108 512 aa5.54□□□□□ -1.52
KTN1-217ENST00000554831 ERICH6Q7L0X2 663 aa5.53□□□□□ -1.52
KTN1-217ENST00000554831 CEP164Q9UPV0 1460 aa5.52□□□□□ -1.53
KTN1-217ENST00000554831 SOGA1O94964 1423 aa5.52□□□□□ -1.53
KTN1-217ENST00000554831 ANP32CO43423 234 aa5.51□□□□□ -1.53
KTN1-217ENST00000554831 CCDC88BA6NC98 1476 aa5.5□□□□□ -1.53
KTN1-217ENST00000554831 VPS8Q8N3P4 1428 aa5.48□□□□□ -1.53
KTN1-217ENST00000554831 DDX10Q13206 875 aaKnown RBP5.47□□□□□ -1.53
KTN1-217ENST00000554831 P3H3Q8IVL6 736 aa5.47□□□□□ -1.53
KTN1-217ENST00000554831 KIF27Q86VH2 1401 aa5.45□□□□□ -1.54
KTN1-217ENST00000554831 TRIM52Q96A61 297 aa5.45□□□□□ -1.54
KTN1-217ENST00000554831 BAZ1BQ9UIG0 1483 aaKnown RBP5.44□□□□□ -1.54
KTN1-217ENST00000554831 BCANQ96GW7 911 aa5.44□□□□□ -1.54
KTN1-217ENST00000554831 ABCC8Q09428 1581 aa5.44□□□□□ -1.54
KTN1-217ENST00000554831 WIZO95785 1651 aa5.44□□□□□ -1.54
KTN1-217ENST00000554831 TIMELESSQ9UNS1 1208 aa5.44□□□□□ -1.54
KTN1-217ENST00000554831 TONSLQ96HA7 1378 aa5.44□□□□□ -1.54
KTN1-217ENST00000554831 TOP2AP11388 1531 aaKnown RBP5.43□□□□□ -1.54
KTN1-217ENST00000554831 CCNB3Q8WWL7 1395 aa5.42□□□□□ -1.54
KTN1-217ENST00000554831 FKBP8Q14318 412 aa5.42□□□□□ -1.54
KTN1-217ENST00000554831 SLC24A1O60721 1099 aa5.42□□□□□ -1.54
KTN1-217ENST00000554831 POLR3GLQ9BT43 218 aa5.42□□□□□ -1.54
KTN1-217ENST00000554831 CDK11AQ9UQ88 783 aaPredicted RBP5.41□□□□□ -1.54
KTN1-217ENST00000554831 MTUS2Q5JR59 1369 aa5.4□□□□□ -1.55
KTN1-217ENST00000554831 RUSC2Q8N2Y8 1516 aa5.4□□□□□ -1.55
KTN1-217ENST00000554831 KANK4Q5T7N3 995 aaPredicted RBP5.4□□□□□ -1.55
KTN1-217ENST00000554831 HNRNPUQ00839 825 aaKnown RBP eCLIP5.39□□□□□ -1.55
KTN1-217ENST00000554831 CNGB1Q14028 1251 aaPredicted RBP5.38□□□□□ -1.55
KTN1-217ENST00000554831 FHAD1B1AJZ9 1412 aa5.37□□□□□ -1.55
KTN1-217ENST00000554831 CARMIL1Q5VZK9 1371 aa5.37□□□□□ -1.55
KTN1-217ENST00000554831 SIN3AQ96ST3 1273 aa5.37□□□□□ -1.55
KTN1-217ENST00000554831 SUPT16HQ9Y5B9 1047 aaKnown RBP5.37□□□□□ -1.55
KTN1-217ENST00000554831 SMARCA4P51532 1647 aa5.37□□□□□ -1.55
KTN1-217ENST00000554831 ATAD2BQ9ULI0 1458 aa5.36□□□□□ -1.55
KTN1-217ENST00000554831 RAPGEF2Q9Y4G8 1499 aa5.36□□□□□ -1.55
KTN1-217ENST00000554831 HIRIP3Q9BW71 556 aaPredicted RBP5.36□□□□□ -1.55
KTN1-217ENST00000554831 EIF4G2P78344 907 aaKnown RBP eCLIP5.36□□□□□ -1.55
KTN1-217ENST00000554831 SMARCA2P51531 1590 aa5.36□□□□□ -1.55
KTN1-217ENST00000554831 DHX57Q6P158 1386 aaKnown RBP5.35□□□□□ -1.55
KTN1-217ENST00000554831 CCER2I3L3R5 266 aa5.34□□□□□ -1.55
KTN1-217ENST00000554831 PPP1R15AO75807 674 aaPredicted RBP5.34□□□□□ -1.55
KTN1-217ENST00000554831 ZNF326Q5BKZ1 582 aaKnown RBP5.34□□□□□ -1.55
KTN1-217ENST00000554831 CHIC2Q9UKJ5 165 aa5.34□□□□□ -1.55
KTN1-217ENST00000554831 SETD5Q9C0A6 1442 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 1214.6 ms