RNA–Protein interactions for RNA: ENST00000554738.5

NRXN3-208, Transcript of neurexin 3, humanhuman

TSL 5

Gene NRXN3, Length 6,446 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3-208ENST00000554738 DCAF8L2P0C7V8 631 aa18.29■□□□□ 0.52
NRXN3-208ENST00000554738 NISCHQ9Y2I1 1504 aa17.4■□□□□ 0.38
NRXN3-208ENST00000554738 SUPT5HO00267 1087 aaKnown RBP17.36■□□□□ 0.37
NRXN3-208ENST00000554738 SHROOM4Q9ULL8 1493 aa17■□□□□ 0.31
NRXN3-208ENST00000554738 PELP1Q8IZL8 1130 aaKnown RBP16.92■□□□□ 0.3
NRXN3-208ENST00000554738 APLP2Q06481 763 aa16.78■□□□□ 0.28
NRXN3-208ENST00000554738 EHMT2Q96KQ7 1210 aa16.76■□□□□ 0.27
NRXN3-208ENST00000554738 FAM9AQ8IZU1 332 aaPredicted RBP16.63■□□□□ 0.25
NRXN3-208ENST00000554738 ZEB1P37275 1124 aaPredicted RBP16.25■□□□□ 0.19
NRXN3-208ENST00000554738 TTBK1Q5TCY1 1321 aaPredicted RBP16.23■□□□□ 0.19
NRXN3-208ENST00000554738 PCGF6Q9BYE7 350 aa16.22■□□□□ 0.19
NRXN3-208ENST00000554738 CENPBP07199 599 aaPredicted RBP16.19■□□□□ 0.18
NRXN3-208ENST00000554738 TRIM41Q8WV44 630 aa16.17■□□□□ 0.18
NRXN3-208ENST00000554738 CCER1Q8TC90 406 aaPredicted RBP16.16■□□□□ 0.18
NRXN3-208ENST00000554738 ERICH6Q7L0X2 663 aa16.13■□□□□ 0.17
NRXN3-208ENST00000554738 RANGAP1P46060 587 aaPredicted RBP16.09■□□□□ 0.17
NRXN3-208ENST00000554738 ATP1B4Q9UN42 357 aaPredicted RBP16.06■□□□□ 0.16
NRXN3-208ENST00000554738 UBTFP17480 764 aaKnown RBP16.01■□□□□ 0.15
NRXN3-208ENST00000554738 NEFLP07196 543 aa15.9■□□□□ 0.14
NRXN3-208ENST00000554738 YTHDC1Q96MU7 727 aaKnown RBP15.68■□□□□ 0.1
NRXN3-208ENST00000554738 MYT1Q01538 1121 aa15.67■□□□□ 0.1
NRXN3-208ENST00000554738 TRIM26Q12899 539 aaPredicted RBP15.65■□□□□ 0.1
NRXN3-208ENST00000554738 PPARGC1BQ86YN6 1023 aaKnown RBP15.55■□□□□ 0.08
NRXN3-208ENST00000554738 MYT1LQ9UL68 1186 aa15.52■□□□□ 0.08
NRXN3-208ENST00000554738 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.51■□□□□ 0.07
NRXN3-208ENST00000554738 HNRNPUL2Q1KMD3 747 aaKnown RBP15.51■□□□□ 0.07
NRXN3-208ENST00000554738 DAXXQ9UER7 740 aaPredicted RBP15.48■□□□□ 0.07
NRXN3-208ENST00000554738 ITGAEP38570 1179 aa15.45■□□□□ 0.06
NRXN3-208ENST00000554738 POLR3GLQ9BT43 218 aa15.42■□□□□ 0.06
NRXN3-208ENST00000554738 HRCP23327 699 aa15.39■□□□□ 0.05
NRXN3-208ENST00000554738 CHIC1Q5VXU3 224 aa15.31■□□□□ 0.04
NRXN3-208ENST00000554738 LOC105371045A0A1W2PR82 267 aa15.27■□□□□ 0.04
NRXN3-208ENST00000554738 SLC4A1APQ9BWU0 796 aaKnown RBP15.18■□□□□ 0.02
NRXN3-208ENST00000554738 CNGB1Q14028 1251 aaPredicted RBP15.15■□□□□ 0.02
NRXN3-208ENST00000554738 FAM50AQ14320 339 aaKnown RBP15.13■□□□□ 0.01
NRXN3-208ENST00000554738 ZNF316A6NFI3 1004 aaPredicted RBP15.11■□□□□ 0.01
NRXN3-208ENST00000554738 DIEXFQ68CQ4 756 aaKnown RBP15.09■□□□□ 0.01
NRXN3-208ENST00000554738 CLSPNQ9HAW4 1339 aa15.09■□□□□ 0.01
NRXN3-208ENST00000554738 TRIM52Q96A61 297 aa15.08■□□□□ 0.01
NRXN3-208ENST00000554738 RTL5Q5HYW3 569 aaPredicted RBP15.07■□□□□ 0
NRXN3-208ENST00000554738 ABCC9O60706 1549 aa14.99□□□□□ -0.01
NRXN3-208ENST00000554738 NEUROD1Q13562 356 aa14.96□□□□□ -0.01
NRXN3-208ENST00000554738 PABPN1Q86U42 306 aaKnown RBP eCLIP14.95□□□□□ -0.02
NRXN3-208ENST00000554738 ANP32CO43423 234 aa14.93□□□□□ -0.02
NRXN3-208ENST00000554738 ZBTB47Q9UFB7 747 aaPredicted RBP14.89□□□□□ -0.03
NRXN3-208ENST00000554738 ZNF326Q5BKZ1 582 aaKnown RBP14.85□□□□□ -0.03
NRXN3-208ENST00000554738 CDK11AQ9UQ88 783 aaPredicted RBP14.82□□□□□ -0.04
NRXN3-208ENST00000554738 FBLN2P98095 1184 aa14.81□□□□□ -0.04
NRXN3-208ENST00000554738 NEFMP07197 916 aa14.78□□□□□ -0.04
NRXN3-208ENST00000554738 CANXP27824 592 aaKnown RBP14.76□□□□□ -0.05
NRXN3-208ENST00000554738 BCANQ96GW7 911 aa14.74□□□□□ -0.05
NRXN3-208ENST00000554738 GTF3C3Q9Y5Q9 886 aa14.71□□□□□ -0.05
NRXN3-208ENST00000554738 CSRNP3Q8WYN3 585 aa14.7□□□□□ -0.06
NRXN3-208ENST00000554738 SLC24A1O60721 1099 aa14.66□□□□□ -0.06
NRXN3-208ENST00000554738 P3H3Q8IVL6 736 aa14.65□□□□□ -0.07
NRXN3-208ENST00000554738 ZNF777Q9ULD5 760 aaPredicted RBP14.61□□□□□ -0.07
NRXN3-208ENST00000554738 ANP32AP39687 249 aaKnown RBP14.59□□□□□ -0.07
NRXN3-208ENST00000554738 ARID3CA6NKF2 412 aa14.58□□□□□ -0.08
NRXN3-208ENST00000554738 ESF1Q9H501 851 aaKnown RBP14.55□□□□□ -0.08
NRXN3-208ENST00000554738 TONSLQ96HA7 1378 aa14.54□□□□□ -0.08
NRXN3-208ENST00000554738 ACIN1Q9UKV3 1341 aaKnown RBP14.53□□□□□ -0.08
NRXN3-208ENST00000554738 BCL11AQ9H165 835 aa14.52□□□□□ -0.09
NRXN3-208ENST00000554738 SCRIBQ14160 1630 aa14.51□□□□□ -0.09
NRXN3-208ENST00000554738 STAG3Q9UJ98 1225 aa14.47□□□□□ -0.09
NRXN3-208ENST00000554738 NPM1P06748 294 aaKnown RBP eCLIP14.45□□□□□ -0.1
NRXN3-208ENST00000554738 CHGAP10645 457 aaKnown RBP14.43□□□□□ -0.1
NRXN3-208ENST00000554738 ANP32BQ92688 251 aaKnown RBP14.43□□□□□ -0.1
NRXN3-208ENST00000554738 UPF2Q9HAU5 1272 aaKnown RBP14.43□□□□□ -0.1
NRXN3-208ENST00000554738 DCAF1Q9Y4B6 1507 aa14.43□□□□□ -0.1
NRXN3-208ENST00000554738 NPM2Q86SE8 214 aaKnown RBP14.42□□□□□ -0.1
NRXN3-208ENST00000554738 ZCCHC6Q5VYS8 1495 aaKnown RBP14.39□□□□□ -0.11
NRXN3-208ENST00000554738 HSP90AA1P07900 732 aaKnown RBP14.39□□□□□ -0.11
NRXN3-208ENST00000554738 FKBP8Q14318 412 aa14.38□□□□□ -0.11
NRXN3-208ENST00000554738 HNRNPUQ00839 825 aaKnown RBP eCLIP14.37□□□□□ -0.11
NRXN3-208ENST00000554738 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.37□□□□□ -0.11
NRXN3-208ENST00000554738 FAM9BQ8IZU0 186 aa14.34□□□□□ -0.11
NRXN3-208ENST00000554738 DDX10Q13206 875 aaKnown RBP14.32□□□□□ -0.12
NRXN3-208ENST00000554738 TMC1Q8TDI8 760 aa14.32□□□□□ -0.12
NRXN3-208ENST00000554738 TSPY4P0CV99 314 aa14.31□□□□□ -0.12
NRXN3-208ENST00000554738 TSPY10P0CW01 314 aa14.31□□□□□ -0.12
NRXN3-208ENST00000554738 WDR43Q15061 677 aaKnown RBP eCLIP14.31□□□□□ -0.12
NRXN3-208ENST00000554738 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.29□□□□□ -0.12
NRXN3-208ENST00000554738 MTUS2Q5JR59 1369 aa14.29□□□□□ -0.12
NRXN3-208ENST00000554738 CHIC2Q9UKJ5 165 aa14.29□□□□□ -0.12
NRXN3-208ENST00000554738 CCDC180Q9P1Z9 1646 aa14.28□□□□□ -0.12
NRXN3-208ENST00000554738 CCDC136Q96JN2 1154 aa14.26□□□□□ -0.13
NRXN3-208ENST00000554738 MRS2Q9HD23 443 aa14.22□□□□□ -0.13
NRXN3-208ENST00000554738 PLPPR3Q6T4P5 718 aa14.22□□□□□ -0.13
NRXN3-208ENST00000554738 CHMP7Q8WUX9 453 aaPredicted RBP14.21□□□□□ -0.13
NRXN3-208ENST00000554738 SALL2Q9Y467 1007 aaPredicted RBP14.21□□□□□ -0.13
NRXN3-208ENST00000554738 CLIP1P30622 1438 aa14.21□□□□□ -0.13
NRXN3-208ENST00000554738 RSF1Q96T23 1441 aaPredicted RBP14.2□□□□□ -0.14
NRXN3-208ENST00000554738 MYH16Q9H6N6 1097 aa14.19□□□□□ -0.14
NRXN3-208ENST00000554738 KDM2AQ9Y2K7 1162 aa14.19□□□□□ -0.14
NRXN3-208ENST00000554738 EEA1Q15075 1411 aa14.19□□□□□ -0.14
NRXN3-208ENST00000554738 EIF4G2P78344 907 aaKnown RBP eCLIP14.17□□□□□ -0.14
NRXN3-208ENST00000554738 RB1CC1Q8TDY2 1594 aa14.16□□□□□ -0.14
NRXN3-208ENST00000554738 GOLGA3Q08378 1498 aa14.15□□□□□ -0.14
NRXN3-208ENST00000554738 EIF5BO60841 1220 aaKnown RBP14.11□□□□□ -0.15
NRXN3-208ENST00000554738 PLEKHD1A6NEE1 506 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 217.6 ms