RNA–Protein interactions for RNA: ENST00000553189.5

TMTC1-209, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

TSL 2

Gene TMTC1, Length 5,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-209ENST00000553189 DCAF8L2P0C7V8 631 aa13.58□□□□□ -0.24
TMTC1-209ENST00000553189 NISCHQ9Y2I1 1504 aa12.94□□□□□ -0.34
TMTC1-209ENST00000553189 FAM9AQ8IZU1 332 aaPredicted RBP12.42□□□□□ -0.42
TMTC1-209ENST00000553189 ABCC9O60706 1549 aa11.96□□□□□ -0.49
TMTC1-209ENST00000553189 SHROOM4Q9ULL8 1493 aa11.73□□□□□ -0.53
TMTC1-209ENST00000553189 SUPT5HO00267 1087 aaKnown RBP11.7□□□□□ -0.54
TMTC1-209ENST00000553189 PABPN1Q86U42 306 aaKnown RBP eCLIP11.69□□□□□ -0.54
TMTC1-209ENST00000553189 PELP1Q8IZL8 1130 aaKnown RBP11.64□□□□□ -0.55
TMTC1-209ENST00000553189 MYT1LQ9UL68 1186 aa11.56□□□□□ -0.56
TMTC1-209ENST00000553189 APLP2Q06481 763 aa11.55□□□□□ -0.56
TMTC1-209ENST00000553189 ATP1B4Q9UN42 357 aaPredicted RBP11.43□□□□□ -0.58
TMTC1-209ENST00000553189 FBLN2P98095 1184 aa11.39□□□□□ -0.59
TMTC1-209ENST00000553189 TTBK1Q5TCY1 1321 aaPredicted RBP11.38□□□□□ -0.59
TMTC1-209ENST00000553189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.38□□□□□ -0.59
TMTC1-209ENST00000553189 HNRNPUL2Q1KMD3 747 aaKnown RBP11.38□□□□□ -0.59
TMTC1-209ENST00000553189 NPM1P06748 294 aaKnown RBP eCLIP11.32□□□□□ -0.6
TMTC1-209ENST00000553189 MYT1Q01538 1121 aa11.29□□□□□ -0.6
TMTC1-209ENST00000553189 EHMT2Q96KQ7 1210 aa11.27□□□□□ -0.6
TMTC1-209ENST00000553189 RANGAP1P46060 587 aaPredicted RBP11.24□□□□□ -0.61
TMTC1-209ENST00000553189 AEBP2Q6ZN18 517 aaPredicted RBP11.2□□□□□ -0.62
TMTC1-209ENST00000553189 TRHP20396 242 aaPredicted RBP11.16□□□□□ -0.62
TMTC1-209ENST00000553189 ESF1Q9H501 851 aaKnown RBP11.16□□□□□ -0.62
TMTC1-209ENST00000553189 ERICH6Q7L0X2 663 aa11.13□□□□□ -0.63
TMTC1-209ENST00000553189 RB1CC1Q8TDY2 1594 aa11.13□□□□□ -0.63
TMTC1-209ENST00000553189 ERCC6Q03468 1493 aa11.11□□□□□ -0.63
TMTC1-209ENST00000553189 CENPBP07199 599 aaPredicted RBP11.1□□□□□ -0.63
TMTC1-209ENST00000553189 CCER1Q8TC90 406 aaPredicted RBP11.08□□□□□ -0.64
TMTC1-209ENST00000553189 UBTFP17480 764 aaKnown RBP11.08□□□□□ -0.64
TMTC1-209ENST00000553189 TRIM41Q8WV44 630 aa11.06□□□□□ -0.64
TMTC1-209ENST00000553189 CHIC1Q5VXU3 224 aa11.04□□□□□ -0.64
TMTC1-209ENST00000553189 ZEB1P37275 1124 aaPredicted RBP10.97□□□□□ -0.65
TMTC1-209ENST00000553189 CHMP7Q8WUX9 453 aaPredicted RBP10.93□□□□□ -0.66
TMTC1-209ENST00000553189 SCRIBQ14160 1630 aa10.92□□□□□ -0.66
TMTC1-209ENST00000553189 PLPPR3Q6T4P5 718 aa10.92□□□□□ -0.66
TMTC1-209ENST00000553189 PCGF6Q9BYE7 350 aa10.91□□□□□ -0.66
TMTC1-209ENST00000553189 BCANQ96GW7 911 aa10.91□□□□□ -0.66
TMTC1-209ENST00000553189 CCDC180Q9P1Z9 1646 aa10.87□□□□□ -0.67
TMTC1-209ENST00000553189 NACADO15069 1562 aa10.84□□□□□ -0.67
TMTC1-209ENST00000553189 NEFLP07196 543 aa10.79□□□□□ -0.68
TMTC1-209ENST00000553189 ARID4BQ4LE39 1312 aaPredicted RBP10.78□□□□□ -0.68
TMTC1-209ENST00000553189 CDK11AQ9UQ88 783 aaPredicted RBP10.77□□□□□ -0.68
TMTC1-209ENST00000553189 STAG3Q9UJ98 1225 aa10.75□□□□□ -0.69
TMTC1-209ENST00000553189 CECR2Q9BXF3 1484 aa10.7□□□□□ -0.7
TMTC1-209ENST00000553189 YTHDC1Q96MU7 727 aaKnown RBP10.64□□□□□ -0.71
TMTC1-209ENST00000553189 OSCARQ8IYS5 282 aa10.64□□□□□ -0.71
TMTC1-209ENST00000553189 PDS5BQ9NTI5 1447 aa10.63□□□□□ -0.71
TMTC1-209ENST00000553189 SLC4A1APQ9BWU0 796 aaKnown RBP10.62□□□□□ -0.71
TMTC1-209ENST00000553189 SCAF1Q9H7N4 1312 aaKnown RBP10.59□□□□□ -0.71
TMTC1-209ENST00000553189 BAZ1BQ9UIG0 1483 aaKnown RBP10.58□□□□□ -0.72
TMTC1-209ENST00000553189 ARID3CA6NKF2 412 aa10.58□□□□□ -0.72
TMTC1-209ENST00000553189 C14orf37Q86TY3 774 aa10.56□□□□□ -0.72
TMTC1-209ENST00000553189 ZNF777Q9ULD5 760 aaPredicted RBP10.54□□□□□ -0.72
TMTC1-209ENST00000553189 KCNH8Q96L42 1107 aa10.52□□□□□ -0.73
TMTC1-209ENST00000553189 DAXXQ9UER7 740 aaPredicted RBP10.51□□□□□ -0.73
TMTC1-209ENST00000553189 HRCP23327 699 aa10.51□□□□□ -0.73
TMTC1-209ENST00000553189 CYB5RLQ6IPT4 315 aa10.5□□□□□ -0.73
TMTC1-209ENST00000553189 ITGAEP38570 1179 aa10.48□□□□□ -0.73
TMTC1-209ENST00000553189 HAP1P54257 671 aaPredicted RBP10.48□□□□□ -0.73
TMTC1-209ENST00000553189 P3H3Q8IVL6 736 aa10.47□□□□□ -0.73
TMTC1-209ENST00000553189 CHGAP10645 457 aaKnown RBP10.46□□□□□ -0.73
TMTC1-209ENST00000553189 PPP1R15AO75807 674 aaPredicted RBP10.44□□□□□ -0.74
TMTC1-209ENST00000553189 FOXD1Q16676 465 aa10.44□□□□□ -0.74
TMTC1-209ENST00000553189 TRIM26Q12899 539 aaPredicted RBP10.44□□□□□ -0.74
TMTC1-209ENST00000553189 PLEKHD1A6NEE1 506 aa10.43□□□□□ -0.74
TMTC1-209ENST00000553189 TRIM52Q96A61 297 aa10.42□□□□□ -0.74
TMTC1-209ENST00000553189 FAM50AQ14320 339 aaKnown RBP10.41□□□□□ -0.74
TMTC1-209ENST00000553189 DCAF8L1A6NGE4 600 aa10.4□□□□□ -0.74
TMTC1-209ENST00000553189 RTL5Q5HYW3 569 aaPredicted RBP10.4□□□□□ -0.74
TMTC1-209ENST00000553189 ZCCHC6Q5VYS8 1495 aaKnown RBP10.38□□□□□ -0.75
TMTC1-209ENST00000553189 POLR3GLQ9BT43 218 aa10.36□□□□□ -0.75
TMTC1-209ENST00000553189 A0A0G2JS52 829 aa10.36□□□□□ -0.75
TMTC1-209ENST00000553189 TSPY4P0CV99 314 aa10.36□□□□□ -0.75
TMTC1-209ENST00000553189 TSPY10P0CW01 314 aa10.36□□□□□ -0.75
TMTC1-209ENST00000553189 MLECQ14165 292 aa10.34□□□□□ -0.75
TMTC1-209ENST00000553189 HDGFP51858 240 aaKnown RBP10.33□□□□□ -0.76
TMTC1-209ENST00000553189 SMARCA2P51531 1590 aa10.33□□□□□ -0.76
TMTC1-209ENST00000553189 SLC24A1O60721 1099 aa10.3□□□□□ -0.76
TMTC1-209ENST00000553189 PHF23Q9BUL5 403 aaPredicted RBP10.3□□□□□ -0.76
TMTC1-209ENST00000553189 SENP3Q9H4L4 574 aaPredicted RBP10.29□□□□□ -0.76
TMTC1-209ENST00000553189 CARMIL2Q6F5E8 1435 aa10.29□□□□□ -0.76
TMTC1-209ENST00000553189 ZNF316A6NFI3 1004 aaPredicted RBP10.27□□□□□ -0.77
TMTC1-209ENST00000553189 NEFMP07197 916 aa10.27□□□□□ -0.77
TMTC1-209ENST00000553189 NPM2Q86SE8 214 aaKnown RBP10.27□□□□□ -0.77
TMTC1-209ENST00000553189 CEP164Q9UPV0 1460 aa10.24□□□□□ -0.77
TMTC1-209ENST00000553189 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.24□□□□□ -0.77
TMTC1-209ENST00000553189 BAZ1AQ9NRL2 1556 aaPredicted RBP10.23□□□□□ -0.77
TMTC1-209ENST00000553189 ZNF326Q5BKZ1 582 aaKnown RBP10.23□□□□□ -0.77
TMTC1-209ENST00000553189 CSRNP3Q8WYN3 585 aa10.23□□□□□ -0.77
TMTC1-209ENST00000553189 FAM69CQ0P6D2 419 aa10.22□□□□□ -0.77
TMTC1-209ENST00000553189 PPARGC1BQ86YN6 1023 aaKnown RBP10.21□□□□□ -0.77
TMTC1-209ENST00000553189 CADPSQ9ULU8 1353 aa10.21□□□□□ -0.77
TMTC1-209ENST00000553189 DIEXFQ68CQ4 756 aaKnown RBP10.2□□□□□ -0.78
TMTC1-209ENST00000553189 MEX3CQ5U5Q3 659 aaKnown RBP10.19□□□□□ -0.78
TMTC1-209ENST00000553189 DNAJC5BQ9UF47 199 aa10.18□□□□□ -0.78
TMTC1-209ENST00000553189 WRNQ14191 1432 aaPredicted RBP eCLIP10.16□□□□□ -0.78
TMTC1-209ENST00000553189 SOGA1O94964 1423 aa10.15□□□□□ -0.79
TMTC1-209ENST00000553189 ZBTB7CA1YPR0 619 aa10.14□□□□□ -0.79
TMTC1-209ENST00000553189 LMOD2Q6P5Q4 547 aa10.14□□□□□ -0.79
TMTC1-209ENST00000553189 PLEKHG5O94827 1062 aa10.14□□□□□ -0.79
TMTC1-209ENST00000553189 KIF27Q86VH2 1401 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms