RNA–Protein interactions for RNA: ENST00000551088.1

TMTC3-204, Transcript of transmembrane and tetratricopeptide repeat containing 3, humanhuman

TSL 3

Gene TMTC3, Length 646 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC3-204ENST00000551088 AEBP2Q6ZN18 517 aaPredicted RBP35.64■■■■□ 3.3
TMTC3-204ENST00000551088 CHIC1Q5VXU3 224 aa34.05■■■■□ 3.04
TMTC3-204ENST00000551088 SENP3Q9H4L4 574 aaPredicted RBP30.44■■■□□ 2.46
TMTC3-204ENST00000551088 PHF23Q9BUL5 403 aaPredicted RBP30.03■■■□□ 2.4
TMTC3-204ENST00000551088 FOXD1Q16676 465 aa28.3■■■□□ 2.12
TMTC3-204ENST00000551088 PLPPR3Q6T4P5 718 aa27.33■■□□□ 1.97
TMTC3-204ENST00000551088 PPP6R1Q9UPN7 881 aa26.59■■□□□ 1.85
TMTC3-204ENST00000551088 PIAS4Q8N2W9 510 aaPredicted RBP26.56■■□□□ 1.84
TMTC3-204ENST00000551088 ADRA2BP18089 450 aa26.54■■□□□ 1.84
TMTC3-204ENST00000551088 MSH5O43196 834 aa26.47■■□□□ 1.83
TMTC3-204ENST00000551088 POTEDQ86YR6 584 aa25.48■■□□□ 1.67
TMTC3-204ENST00000551088 SCAF1Q9H7N4 1312 aaKnown RBP24.34■■□□□ 1.49
TMTC3-204ENST00000551088 MAPK8IP2Q13387 824 aaPredicted RBP24.3■■□□□ 1.48
TMTC3-204ENST00000551088 DMRT2Q9Y5R5 561 aa24.14■■□□□ 1.45
TMTC3-204ENST00000551088 PPP4R3CPQ6ZMV5 832 aa23.96■■□□□ 1.43
TMTC3-204ENST00000551088 CNKSR2Q8WXI2 1034 aa23.48■■□□□ 1.35
TMTC3-204ENST00000551088 HOXD11P31277 338 aaPredicted RBP23.31■■□□□ 1.32
TMTC3-204ENST00000551088 DCAF8L1A6NGE4 600 aa23.22■■□□□ 1.31
TMTC3-204ENST00000551088 RNF216Q9NWF9 866 aaPredicted RBP23.21■■□□□ 1.31
TMTC3-204ENST00000551088 NCBP3Q53F19 620 aaKnown RBP23.14■■□□□ 1.29
TMTC3-204ENST00000551088 NISCHQ9Y2I1 1504 aa22.92■■□□□ 1.26
TMTC3-204ENST00000551088 NPM3O75607 178 aaKnown RBP22.76■■□□□ 1.23
TMTC3-204ENST00000551088 CACNB1Q02641 598 aaPredicted RBP22.6■■□□□ 1.21
TMTC3-204ENST00000551088 RNF39Q9H2S5 420 aa22.57■■□□□ 1.2
TMTC3-204ENST00000551088 KCNA4P22459 653 aa22.5■■□□□ 1.19
TMTC3-204ENST00000551088 DNAJC5BQ9UF47 199 aa22.46■■□□□ 1.19
TMTC3-204ENST00000551088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.28■■□□□ 1.16
TMTC3-204ENST00000551088 C1QBPQ07021 282 aaKnown RBP22.27■■□□□ 1.16
TMTC3-204ENST00000551088 U3KPZ7 1027 aaPredicted RBP21.78■■□□□ 1.08
TMTC3-204ENST00000551088 SLC4A2P04920 1241 aa21.66■■□□□ 1.06
TMTC3-204ENST00000551088 CAPN15O75808 1086 aa21.42■■□□□ 1.02
TMTC3-204ENST00000551088 SPINK5Q9NQ38 1064 aaPredicted RBP21.42■■□□□ 1.02
TMTC3-204ENST00000551088 SLC4A1APQ9BWU0 796 aaKnown RBP21.3■■□□□ 1
TMTC3-204ENST00000551088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.28■■□□□ 1
TMTC3-204ENST00000551088 HNRNPUL2Q1KMD3 747 aaKnown RBP21.28■■□□□ 1
TMTC3-204ENST00000551088 APLP2Q06481 763 aa21.27■■□□□ 1
TMTC3-204ENST00000551088 DSG3P32926 999 aa21.19■□□□□ 0.98
TMTC3-204ENST00000551088 SAMD1Q6SPF0 538 aaPredicted RBP21.16■□□□□ 0.98
TMTC3-204ENST00000551088 TRHP20396 242 aaPredicted RBP21.11■□□□□ 0.97
TMTC3-204ENST00000551088 MYCNP04198 464 aaPredicted RBP21.08■□□□□ 0.97
TMTC3-204ENST00000551088 ZNF219Q9P2Y4 722 aaPredicted RBP21.08■□□□□ 0.97
TMTC3-204ENST00000551088 FOXD4L1Q9NU39 408 aa20.95■□□□□ 0.94
TMTC3-204ENST00000551088 ABCB7O75027 752 aa20.93■□□□□ 0.94
TMTC3-204ENST00000551088 ZBTB22O15209 634 aa20.68■□□□□ 0.9
TMTC3-204ENST00000551088 ABCC9O60706 1549 aa20.68■□□□□ 0.9
TMTC3-204ENST00000551088 CCDC180Q9P1Z9 1646 aa20.67■□□□□ 0.9
TMTC3-204ENST00000551088 POLA2Q14181 598 aa20.57■□□□□ 0.88
TMTC3-204ENST00000551088 ATF5Q9Y2D1 282 aaPredicted RBP20.53■□□□□ 0.88
TMTC3-204ENST00000551088 ATXN8OSP0DMR3 200 aa20.28■□□□□ 0.84
TMTC3-204ENST00000551088 RBM42Q9BTD8 480 aaKnown RBP20.27■□□□□ 0.84
TMTC3-204ENST00000551088 ZBTB12Q9Y330 459 aaPredicted RBP20.21■□□□□ 0.83
TMTC3-204ENST00000551088 POTEHQ6S545 545 aa20.02■□□□□ 0.8
TMTC3-204ENST00000551088 OSCARQ8IYS5 282 aa19.92■□□□□ 0.78
TMTC3-204ENST00000551088 CSRNP3Q8WYN3 585 aa19.88■□□□□ 0.77
TMTC3-204ENST00000551088 AKT1S1Q96B36 256 aa19.81■□□□□ 0.76
TMTC3-204ENST00000551088 EHMT2Q96KQ7 1210 aa19.81■□□□□ 0.76
TMTC3-204ENST00000551088 FBLN2P98095 1184 aa19.79■□□□□ 0.76
TMTC3-204ENST00000551088 CHRDL2Q6WN34 429 aa19.74■□□□□ 0.75
TMTC3-204ENST00000551088 RB1CC1Q8TDY2 1594 aa19.68■□□□□ 0.74
TMTC3-204ENST00000551088 REM2Q8IYK8 340 aaPredicted RBP19.62■□□□□ 0.73
TMTC3-204ENST00000551088 MKRN4PQ13434 485 aaPredicted RBP19.6■□□□□ 0.73
TMTC3-204ENST00000551088 SPDYE2BA6NHP3 402 aa19.57■□□□□ 0.72
TMTC3-204ENST00000551088 SPDYE6P0CI01 402 aa19.57■□□□□ 0.72
TMTC3-204ENST00000551088 SPDYE2Q495Y8 402 aa19.57■□□□□ 0.72
TMTC3-204ENST00000551088 NACADO15069 1562 aa19.5■□□□□ 0.71
TMTC3-204ENST00000551088 DCAF8L2P0C7V8 631 aa19.45■□□□□ 0.7
TMTC3-204ENST00000551088 PITPNM1O00562 1244 aa19.43■□□□□ 0.7
TMTC3-204ENST00000551088 UNC13AQ9UPW8 1703 aa19.38■□□□□ 0.69
TMTC3-204ENST00000551088 ZNF692Q9BU19 519 aaPredicted RBP19.37■□□□□ 0.69
TMTC3-204ENST00000551088 SSUH2Q9Y2M2 353 aa19.3■□□□□ 0.68
TMTC3-204ENST00000551088 PIP4P2Q8N4L2 257 aa19.29■□□□□ 0.68
TMTC3-204ENST00000551088 PABPN1Q86U42 306 aaKnown RBP eCLIP19.22■□□□□ 0.67
TMTC3-204ENST00000551088 FXR2P51116 673 aaKnown RBP eCLIP19.19■□□□□ 0.66
TMTC3-204ENST00000551088 SPDYE1Q8NFV5 336 aaPredicted RBP19.19■□□□□ 0.66
TMTC3-204ENST00000551088 CLEC11AQ9Y240 323 aa19.16■□□□□ 0.66
TMTC3-204ENST00000551088 MYO15BQ96JP2 1530 aa19.15■□□□□ 0.66
TMTC3-204ENST00000551088 BICRAQ9NZM4 1560 aa19.07■□□□□ 0.64
TMTC3-204ENST00000551088 ZCCHC6Q5VYS8 1495 aaKnown RBP18.97■□□□□ 0.63
TMTC3-204ENST00000551088 PRKAR2AP13861 404 aaKnown RBP18.93■□□□□ 0.62
TMTC3-204ENST00000551088 HAX1O00165 279 aa18.91■□□□□ 0.62
TMTC3-204ENST00000551088 DCAF1Q9Y4B6 1507 aa18.9■□□□□ 0.62
TMTC3-204ENST00000551088 PRR29P0C7W0 189 aa18.86■□□□□ 0.61
TMTC3-204ENST00000551088 SP7Q8TDD2 431 aaPredicted RBP18.86■□□□□ 0.61
TMTC3-204ENST00000551088 SCRIBQ14160 1630 aa18.85■□□□□ 0.61
TMTC3-204ENST00000551088 SPDYE4A6NLX3 237 aa18.82■□□□□ 0.6
TMTC3-204ENST00000551088 CHADLQ6NUI6 762 aa18.75■□□□□ 0.59
TMTC3-204ENST00000551088 SHROOM4Q9ULL8 1493 aa18.75■□□□□ 0.59
TMTC3-204ENST00000551088 CC2D2AQ9P2K1 1620 aa18.7■□□□□ 0.58
TMTC3-204ENST00000551088 EVX2Q03828 476 aa18.63■□□□□ 0.57
TMTC3-204ENST00000551088 STAG3Q9UJ98 1225 aa18.62■□□□□ 0.57
TMTC3-204ENST00000551088 EIF4G1Q04637 1599 aaKnown RBP18.62■□□□□ 0.57
TMTC3-204ENST00000551088 CECR2Q9BXF3 1484 aa18.6■□□□□ 0.57
TMTC3-204ENST00000551088 C19orf67A6NJJ6 358 aa18.57■□□□□ 0.56
TMTC3-204ENST00000551088 FARP1Q9Y4F1 1045 aaPredicted RBP18.49■□□□□ 0.55
TMTC3-204ENST00000551088 CREBZFQ9NS37 354 aa18.4■□□□□ 0.54
TMTC3-204ENST00000551088 CD44P16070 742 aaKnown RBP18.35■□□□□ 0.53
TMTC3-204ENST00000551088 PROM2Q8N271 834 aa18.34■□□□□ 0.53
TMTC3-204ENST00000551088 GABBR2O75899 941 aa18.25■□□□□ 0.51
TMTC3-204ENST00000551088 ZRANB1Q9UGI0 708 aa18.12■□□□□ 0.49
TMTC3-204ENST00000551088 NPM1P06748 294 aaKnown RBP eCLIP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms