RNA–Protein interactions for RNA: ENST00000548855.5

PDE1B-205, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best)

Gene PDE1B, Length 4,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-205ENST00000548855 NISCHQ9Y2I1 1504 aa24.11■■□□□ 1.45
PDE1B-205ENST00000548855 DCAF8L2P0C7V8 631 aa23.28■■□□□ 1.32
PDE1B-205ENST00000548855 SUPT5HO00267 1087 aaKnown RBP22.32■■□□□ 1.16
PDE1B-205ENST00000548855 SHROOM4Q9ULL8 1493 aa22.25■■□□□ 1.15
PDE1B-205ENST00000548855 EHMT2Q96KQ7 1210 aa21.15■□□□□ 0.98
PDE1B-205ENST00000548855 FAM9AQ8IZU1 332 aaPredicted RBP20.91■□□□□ 0.94
PDE1B-205ENST00000548855 TRIM41Q8WV44 630 aa20.75■□□□□ 0.91
PDE1B-205ENST00000548855 PCGF6Q9BYE7 350 aa20.62■□□□□ 0.89
PDE1B-205ENST00000548855 APLP2Q06481 763 aa20.58■□□□□ 0.89
PDE1B-205ENST00000548855 ABCC9O60706 1549 aa20.44■□□□□ 0.86
PDE1B-205ENST00000548855 TTBK1Q5TCY1 1321 aaPredicted RBP20.41■□□□□ 0.86
PDE1B-205ENST00000548855 CHIC1Q5VXU3 224 aa20.38■□□□□ 0.85
PDE1B-205ENST00000548855 RANGAP1P46060 587 aaPredicted RBP20.28■□□□□ 0.84
PDE1B-205ENST00000548855 UBTFP17480 764 aaKnown RBP20.27■□□□□ 0.84
PDE1B-205ENST00000548855 LOC105371045A0A1W2PR82 267 aa20.13■□□□□ 0.81
PDE1B-205ENST00000548855 ZEB1P37275 1124 aaPredicted RBP20.09■□□□□ 0.81
PDE1B-205ENST00000548855 ZCCHC6Q5VYS8 1495 aaKnown RBP20.06■□□□□ 0.8
PDE1B-205ENST00000548855 CCER1Q8TC90 406 aaPredicted RBP20.04■□□□□ 0.8
PDE1B-205ENST00000548855 PPARGC1BQ86YN6 1023 aaKnown RBP19.98■□□□□ 0.79
PDE1B-205ENST00000548855 PABPN1Q86U42 306 aaKnown RBP eCLIP19.97■□□□□ 0.79
PDE1B-205ENST00000548855 TRIM26Q12899 539 aaPredicted RBP19.97■□□□□ 0.79
PDE1B-205ENST00000548855 ATP1B4Q9UN42 357 aaPredicted RBP19.96■□□□□ 0.79
PDE1B-205ENST00000548855 CCDC180Q9P1Z9 1646 aa19.95■□□□□ 0.78
PDE1B-205ENST00000548855 HRCP23327 699 aa19.75■□□□□ 0.75
PDE1B-205ENST00000548855 SCRIBQ14160 1630 aa19.67■□□□□ 0.74
PDE1B-205ENST00000548855 PELP1Q8IZL8 1130 aaKnown RBP19.62■□□□□ 0.73
PDE1B-205ENST00000548855 CENPBP07199 599 aaPredicted RBP19.57■□□□□ 0.72
PDE1B-205ENST00000548855 HNRNPUL2Q1KMD3 747 aaKnown RBP19.48■□□□□ 0.71
PDE1B-205ENST00000548855 ITGAEP38570 1179 aa19.46■□□□□ 0.71
PDE1B-205ENST00000548855 RB1CC1Q8TDY2 1594 aa19.41■□□□□ 0.7
PDE1B-205ENST00000548855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.34■□□□□ 0.69
PDE1B-205ENST00000548855 CSRNP3Q8WYN3 585 aa19.32■□□□□ 0.68
PDE1B-205ENST00000548855 YTHDC1Q96MU7 727 aaKnown RBP19.28■□□□□ 0.68
PDE1B-205ENST00000548855 RSF1Q96T23 1441 aaPredicted RBP19.24■□□□□ 0.67
PDE1B-205ENST00000548855 DCAF1Q9Y4B6 1507 aa19.23■□□□□ 0.67
PDE1B-205ENST00000548855 NACADO15069 1562 aa19.21■□□□□ 0.67
PDE1B-205ENST00000548855 FAM50AQ14320 339 aaKnown RBP19.1■□□□□ 0.65
PDE1B-205ENST00000548855 MYO15BQ96JP2 1530 aa19.01■□□□□ 0.63
PDE1B-205ENST00000548855 NEFLP07196 543 aa18.99■□□□□ 0.63
PDE1B-205ENST00000548855 DIEXFQ68CQ4 756 aaKnown RBP18.99■□□□□ 0.63
PDE1B-205ENST00000548855 P3H3Q8IVL6 736 aa18.95■□□□□ 0.62
PDE1B-205ENST00000548855 MYT1LQ9UL68 1186 aa18.95■□□□□ 0.62
PDE1B-205ENST00000548855 CECR2Q9BXF3 1484 aa18.91■□□□□ 0.62
PDE1B-205ENST00000548855 FBLN2P98095 1184 aa18.88■□□□□ 0.61
PDE1B-205ENST00000548855 POLR3GLQ9BT43 218 aa18.87■□□□□ 0.61
PDE1B-205ENST00000548855 BAZ1AQ9NRL2 1556 aaPredicted RBP18.85■□□□□ 0.61
PDE1B-205ENST00000548855 TRIM52Q96A61 297 aa18.84■□□□□ 0.61
PDE1B-205ENST00000548855 NEUROD1Q13562 356 aa18.83■□□□□ 0.61
PDE1B-205ENST00000548855 BAZ1BQ9UIG0 1483 aaKnown RBP18.77■□□□□ 0.6
PDE1B-205ENST00000548855 WRNQ14191 1432 aaPredicted RBP eCLIP18.75■□□□□ 0.59
PDE1B-205ENST00000548855 EEA1Q15075 1411 aa18.75■□□□□ 0.59
PDE1B-205ENST00000548855 ZNF316A6NFI3 1004 aaPredicted RBP18.72■□□□□ 0.59
PDE1B-205ENST00000548855 ARID3CA6NKF2 412 aa18.72■□□□□ 0.59
PDE1B-205ENST00000548855 CNGB1Q14028 1251 aaPredicted RBP18.71■□□□□ 0.58
PDE1B-205ENST00000548855 ERICH6Q7L0X2 663 aa18.7■□□□□ 0.58
PDE1B-205ENST00000548855 MROH2BQ7Z745 1585 aa18.69■□□□□ 0.58
PDE1B-205ENST00000548855 CLIP1P30622 1438 aa18.68■□□□□ 0.58
PDE1B-205ENST00000548855 CEP162Q5TB80 1403 aa18.64■□□□□ 0.57
PDE1B-205ENST00000548855 GOLGA3Q08378 1498 aa18.63■□□□□ 0.57
PDE1B-205ENST00000548855 CDK11AQ9UQ88 783 aaPredicted RBP18.59■□□□□ 0.57
PDE1B-205ENST00000548855 TNIKQ9UKE5 1360 aa18.56■□□□□ 0.56
PDE1B-205ENST00000548855 ZNF326Q5BKZ1 582 aaKnown RBP18.52■□□□□ 0.56
PDE1B-205ENST00000548855 ZNF777Q9ULD5 760 aaPredicted RBP18.52■□□□□ 0.55
PDE1B-205ENST00000548855 CCDC88BA6NC98 1476 aa18.51■□□□□ 0.55
PDE1B-205ENST00000548855 CEP164Q9UPV0 1460 aa18.51■□□□□ 0.55
PDE1B-205ENST00000548855 KIF27Q86VH2 1401 aa18.5■□□□□ 0.55
PDE1B-205ENST00000548855 ANP32CO43423 234 aa18.49■□□□□ 0.55
PDE1B-205ENST00000548855 SOGA1O94964 1423 aa18.46■□□□□ 0.55
PDE1B-205ENST00000548855 GTF3C3Q9Y5Q9 886 aa18.42■□□□□ 0.54
PDE1B-205ENST00000548855 MTUS2Q5JR59 1369 aa18.41■□□□□ 0.54
PDE1B-205ENST00000548855 WIZO95785 1651 aa18.41■□□□□ 0.54
PDE1B-205ENST00000548855 SLC4A1APQ9BWU0 796 aaKnown RBP18.38■□□□□ 0.53
PDE1B-205ENST00000548855 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
PDE1B-205ENST00000548855 TONSLQ96HA7 1378 aa18.37■□□□□ 0.53
PDE1B-205ENST00000548855 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
PDE1B-205ENST00000548855 CHIC2Q9UKJ5 165 aa18.36■□□□□ 0.53
PDE1B-205ENST00000548855 SMARCA2P51531 1590 aa18.36■□□□□ 0.53
PDE1B-205ENST00000548855 ERCC6Q03468 1493 aa18.35■□□□□ 0.53
PDE1B-205ENST00000548855 TOP2AP11388 1531 aaKnown RBP18.35■□□□□ 0.53
PDE1B-205ENST00000548855 ACIN1Q9UKV3 1341 aaKnown RBP18.33■□□□□ 0.53
PDE1B-205ENST00000548855 CUX2O14529 1486 aa18.25■□□□□ 0.51
PDE1B-205ENST00000548855 CARMIL1Q5VZK9 1371 aa18.23■□□□□ 0.51
PDE1B-205ENST00000548855 SMARCA4P51532 1647 aa18.22■□□□□ 0.51
PDE1B-205ENST00000548855 DDX10Q13206 875 aaKnown RBP18.22■□□□□ 0.51
PDE1B-205ENST00000548855 BCANQ96GW7 911 aa18.21■□□□□ 0.51
PDE1B-205ENST00000548855 ATAD2BQ9ULI0 1458 aa18.2■□□□□ 0.5
PDE1B-205ENST00000548855 TSPY4P0CV99 314 aa18.18■□□□□ 0.5
PDE1B-205ENST00000548855 TSPY10P0CW01 314 aa18.18■□□□□ 0.5
PDE1B-205ENST00000548855 RRP7BPQ9NSQ0 103 aa18.17■□□□□ 0.5
PDE1B-205ENST00000548855 VPS8Q8N3P4 1428 aa18.14■□□□□ 0.49
PDE1B-205ENST00000548855 MYT1Q01538 1121 aa18.12■□□□□ 0.49
PDE1B-205ENST00000548855 DAXXQ9UER7 740 aaPredicted RBP18.12■□□□□ 0.49
PDE1B-205ENST00000548855 NPM1P06748 294 aaKnown RBP eCLIP18.11■□□□□ 0.49
PDE1B-205ENST00000548855 FHAD1B1AJZ9 1412 aa18.11■□□□□ 0.49
PDE1B-205ENST00000548855 PLEKHD1A6NEE1 506 aa18.1■□□□□ 0.49
PDE1B-205ENST00000548855 MIER1Q8N108 512 aa18.09■□□□□ 0.49
PDE1B-205ENST00000548855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.08■□□□□ 0.48
PDE1B-205ENST00000548855 CADPSQ9ULU8 1353 aa18.07■□□□□ 0.48
PDE1B-205ENST00000548855 CCNB3Q8WWL7 1395 aa18.07■□□□□ 0.48
PDE1B-205ENST00000548855 HIRIP3Q9BW71 556 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms