RNA–Protein interactions for RNA: ENST00000548346.1

NPIPB12-203, Transcript of nuclear pore complex interacting protein family, member B12, humanhuman

TSL 2

Gene NPIPB12, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB12-203ENST00000548346 AEBP2Q6ZN18 517 aaPredicted RBP21.5■■□□□ 1.03
NPIPB12-203ENST00000548346 CHIC1Q5VXU3 224 aa20.53■□□□□ 0.88
NPIPB12-203ENST00000548346 SENP3Q9H4L4 574 aaPredicted RBP18.13■□□□□ 0.49
NPIPB12-203ENST00000548346 PHF23Q9BUL5 403 aaPredicted RBP18.1■□□□□ 0.49
NPIPB12-203ENST00000548346 FOXD1Q16676 465 aa16.98■□□□□ 0.31
NPIPB12-203ENST00000548346 PLPPR3Q6T4P5 718 aa16.43■□□□□ 0.22
NPIPB12-203ENST00000548346 PPP6R1Q9UPN7 881 aa16.11■□□□□ 0.17
NPIPB12-203ENST00000548346 ADRA2BP18089 450 aa16.02■□□□□ 0.16
NPIPB12-203ENST00000548346 PIAS4Q8N2W9 510 aaPredicted RBP15.85■□□□□ 0.13
NPIPB12-203ENST00000548346 MSH5O43196 834 aa15.67■□□□□ 0.1
NPIPB12-203ENST00000548346 POTEDQ86YR6 584 aa15.04■□□□□ -0
NPIPB12-203ENST00000548346 MAPK8IP2Q13387 824 aaPredicted RBP14.68□□□□□ -0.06
NPIPB12-203ENST00000548346 PPP4R3CPQ6ZMV5 832 aa14.47□□□□□ -0.09
NPIPB12-203ENST00000548346 DMRT2Q9Y5R5 561 aa14.47□□□□□ -0.09
NPIPB12-203ENST00000548346 SCAF1Q9H7N4 1312 aaKnown RBP14.46□□□□□ -0.09
NPIPB12-203ENST00000548346 CNKSR2Q8WXI2 1034 aa14.11□□□□□ -0.15
NPIPB12-203ENST00000548346 HOXD11P31277 338 aaPredicted RBP14.03□□□□□ -0.16
NPIPB12-203ENST00000548346 RNF216Q9NWF9 866 aaPredicted RBP13.94□□□□□ -0.18
NPIPB12-203ENST00000548346 NCBP3Q53F19 620 aaKnown RBP13.86□□□□□ -0.19
NPIPB12-203ENST00000548346 NPM3O75607 178 aaKnown RBP13.83□□□□□ -0.2
NPIPB12-203ENST00000548346 DCAF8L1A6NGE4 600 aa13.78□□□□□ -0.2
NPIPB12-203ENST00000548346 KCNA4P22459 653 aa13.78□□□□□ -0.2
NPIPB12-203ENST00000548346 RNF39Q9H2S5 420 aa13.49□□□□□ -0.25
NPIPB12-203ENST00000548346 DNAJC5BQ9UF47 199 aa13.46□□□□□ -0.25
NPIPB12-203ENST00000548346 CACNB1Q02641 598 aaPredicted RBP13.32□□□□□ -0.28
NPIPB12-203ENST00000548346 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.27□□□□□ -0.29
NPIPB12-203ENST00000548346 C1QBPQ07021 282 aaKnown RBP13.22□□□□□ -0.29
NPIPB12-203ENST00000548346 SLC4A2P04920 1241 aa13.2□□□□□ -0.3
NPIPB12-203ENST00000548346 U3KPZ7 1027 aaPredicted RBP13.15□□□□□ -0.3
NPIPB12-203ENST00000548346 SLC4A1APQ9BWU0 796 aaKnown RBP12.97□□□□□ -0.33
NPIPB12-203ENST00000548346 SPINK5Q9NQ38 1064 aaPredicted RBP12.9□□□□□ -0.34
NPIPB12-203ENST00000548346 ZBTB22O15209 634 aa12.75□□□□□ -0.37
NPIPB12-203ENST00000548346 CAPN15O75808 1086 aa12.75□□□□□ -0.37
NPIPB12-203ENST00000548346 NISCHQ9Y2I1 1504 aa12.72□□□□□ -0.37
NPIPB12-203ENST00000548346 DSG3P32926 999 aa12.71□□□□□ -0.37
NPIPB12-203ENST00000548346 FOXD4L1Q9NU39 408 aa12.71□□□□□ -0.37
NPIPB12-203ENST00000548346 MYCNP04198 464 aaPredicted RBP12.7□□□□□ -0.38
NPIPB12-203ENST00000548346 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.66□□□□□ -0.38
NPIPB12-203ENST00000548346 HNRNPUL2Q1KMD3 747 aaKnown RBP12.66□□□□□ -0.38
NPIPB12-203ENST00000548346 SAMD1Q6SPF0 538 aaPredicted RBP12.64□□□□□ -0.39
NPIPB12-203ENST00000548346 TRHP20396 242 aaPredicted RBP12.62□□□□□ -0.39
NPIPB12-203ENST00000548346 APLP2Q06481 763 aa12.57□□□□□ -0.4
NPIPB12-203ENST00000548346 ZNF219Q9P2Y4 722 aaPredicted RBP12.56□□□□□ -0.4
NPIPB12-203ENST00000548346 ABCB7O75027 752 aa12.54□□□□□ -0.4
NPIPB12-203ENST00000548346 ATF5Q9Y2D1 282 aaPredicted RBP12.54□□□□□ -0.4
NPIPB12-203ENST00000548346 POLA2Q14181 598 aa12.35□□□□□ -0.43
NPIPB12-203ENST00000548346 CSRNP3Q8WYN3 585 aa12.3□□□□□ -0.44
NPIPB12-203ENST00000548346 ATXN8OSP0DMR3 200 aa12.26□□□□□ -0.45
NPIPB12-203ENST00000548346 EHMT2Q96KQ7 1210 aa12.2□□□□□ -0.46
NPIPB12-203ENST00000548346 ZBTB12Q9Y330 459 aaPredicted RBP12.01□□□□□ -0.49
NPIPB12-203ENST00000548346 OSCARQ8IYS5 282 aa11.99□□□□□ -0.49
NPIPB12-203ENST00000548346 ABCC9O60706 1549 aa11.98□□□□□ -0.49
NPIPB12-203ENST00000548346 RBM42Q9BTD8 480 aaKnown RBP11.98□□□□□ -0.49
NPIPB12-203ENST00000548346 MKRN4PQ13434 485 aaPredicted RBP11.96□□□□□ -0.49
NPIPB12-203ENST00000548346 FBLN2P98095 1184 aa11.82□□□□□ -0.52
NPIPB12-203ENST00000548346 AKT1S1Q96B36 256 aa11.81□□□□□ -0.52
NPIPB12-203ENST00000548346 POTEHQ6S545 545 aa11.79□□□□□ -0.52
NPIPB12-203ENST00000548346 REM2Q8IYK8 340 aaPredicted RBP11.75□□□□□ -0.53
NPIPB12-203ENST00000548346 CHRDL2Q6WN34 429 aa11.73□□□□□ -0.53
NPIPB12-203ENST00000548346 SPDYE2BA6NHP3 402 aa11.71□□□□□ -0.53
NPIPB12-203ENST00000548346 SPDYE6P0CI01 402 aa11.71□□□□□ -0.53
NPIPB12-203ENST00000548346 SPDYE2Q495Y8 402 aa11.71□□□□□ -0.53
NPIPB12-203ENST00000548346 SSUH2Q9Y2M2 353 aa11.67□□□□□ -0.54
NPIPB12-203ENST00000548346 PITPNM1O00562 1244 aa11.64□□□□□ -0.55
NPIPB12-203ENST00000548346 ZNF692Q9BU19 519 aaPredicted RBP11.62□□□□□ -0.55
NPIPB12-203ENST00000548346 CCDC180Q9P1Z9 1646 aa11.6□□□□□ -0.55
NPIPB12-203ENST00000548346 PIP4P2Q8N4L2 257 aa11.53□□□□□ -0.56
NPIPB12-203ENST00000548346 FXR2P51116 673 aaKnown RBP eCLIP11.49□□□□□ -0.57
NPIPB12-203ENST00000548346 PABPN1Q86U42 306 aaKnown RBP eCLIP11.49□□□□□ -0.57
NPIPB12-203ENST00000548346 SPDYE1Q8NFV5 336 aaPredicted RBP11.44□□□□□ -0.58
NPIPB12-203ENST00000548346 CLEC11AQ9Y240 323 aa11.42□□□□□ -0.58
NPIPB12-203ENST00000548346 SPDYE4A6NLX3 237 aa11.4□□□□□ -0.58
NPIPB12-203ENST00000548346 PRKAR2AP13861 404 aaKnown RBP11.3□□□□□ -0.6
NPIPB12-203ENST00000548346 CHADLQ6NUI6 762 aa11.28□□□□□ -0.6
NPIPB12-203ENST00000548346 PRR29P0C7W0 189 aa11.25□□□□□ -0.61
NPIPB12-203ENST00000548346 RB1CC1Q8TDY2 1594 aa11.24□□□□□ -0.61
NPIPB12-203ENST00000548346 PROM2Q8N271 834 aa11.24□□□□□ -0.61
NPIPB12-203ENST00000548346 EVX2Q03828 476 aa11.23□□□□□ -0.61
NPIPB12-203ENST00000548346 HAX1O00165 279 aa11.18□□□□□ -0.62
NPIPB12-203ENST00000548346 SP7Q8TDD2 431 aaPredicted RBP11.14□□□□□ -0.63
NPIPB12-203ENST00000548346 CREBZFQ9NS37 354 aa11.13□□□□□ -0.63
NPIPB12-203ENST00000548346 C19orf67A6NJJ6 358 aa11.11□□□□□ -0.63
NPIPB12-203ENST00000548346 STAG3Q9UJ98 1225 aa11.11□□□□□ -0.63
NPIPB12-203ENST00000548346 NACADO15069 1562 aa11.09□□□□□ -0.63
NPIPB12-203ENST00000548346 FARP1Q9Y4F1 1045 aaPredicted RBP11.09□□□□□ -0.63
NPIPB12-203ENST00000548346 FKBP8Q14318 412 aa11.07□□□□□ -0.64
NPIPB12-203ENST00000548346 DNAJC5Q9H3Z4 198 aa11.04□□□□□ -0.64
NPIPB12-203ENST00000548346 MNX1P50219 401 aaPredicted RBP11.02□□□□□ -0.65
NPIPB12-203ENST00000548346 BICRAQ9NZM4 1560 aa10.95□□□□□ -0.66
NPIPB12-203ENST00000548346 CD44P16070 742 aaKnown RBP10.95□□□□□ -0.66
NPIPB12-203ENST00000548346 UNC13AQ9UPW8 1703 aa10.92□□□□□ -0.66
NPIPB12-203ENST00000548346 GABBR2O75899 941 aa10.89□□□□□ -0.67
NPIPB12-203ENST00000548346 CECR2Q9BXF3 1484 aa10.87□□□□□ -0.67
NPIPB12-203ENST00000548346 MYO15BQ96JP2 1530 aa10.85□□□□□ -0.67
NPIPB12-203ENST00000548346 SHROOM4Q9ULL8 1493 aa10.83□□□□□ -0.68
NPIPB12-203ENST00000548346 ZRANB1Q9UGI0 708 aa10.82□□□□□ -0.68
NPIPB12-203ENST00000548346 CC2D2AQ9P2K1 1620 aa10.81□□□□□ -0.68
NPIPB12-203ENST00000548346 ZNF579Q8NAF0 562 aaKnown RBP10.81□□□□□ -0.68
NPIPB12-203ENST00000548346 MIER1Q8N108 512 aa10.8□□□□□ -0.68
NPIPB12-203ENST00000548346 NPM1P06748 294 aaKnown RBP eCLIP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms